PTX3 7060

Name: PTX3	Sequence: fasta or formatted (381aa)		NCBI GI: 167900484
Description: pentraxin 3		Referenced in: Additional Host Defense Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 38 2 C cysteine 2.6 10 2 D aspartate 3.9 15 2 E glutamate 9.7 37 2 F phenylalanine 2.6 10 1 G glycine 9.2 35 3 H histidine 2.4 9 1 I isoleucine 4.5 17 1 K lysine 2.1 8 2 L leucine 11.5 44 2 M methionine 2.6 10 1 N asparagine 3.7 14 1 P proline 3.7 14 1 Q glutamine 3.7 14 1 R arginine 6.6 25 2 S serine 5.8 22 1 T threonine 5.2 20 2 V valine 5.8 22 2 W tryptophan 2.6 10 1 Y tyrosine 1.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pentraxin 3 NPTX2 0.107 neuronal pentraxin II NPTX1 0.101 neuronal pentraxin I precursor NPTXR 0.095 neuronal pentraxin receptor C16orf38 0.085 hypothetical protein LOC390667 SVEP1 0.080 polydom GPR144 0.063 G protein-coupled receptor 144 CRP 0.059 C-reactive protein, pentraxin-related APCS 0.049 serum amyloid P component precursor LOC649458 0.033 PREDICTED: similar to hCG2036669 LOC649458 0.033 PREDICTED: similar to hCG2036669 LOC649458 0.033 PREDICTED: hypothetical protein LOC649458 GPR133 0.023 G protein-coupled receptor 133 GPR126 0.019 G protein-coupled receptor 126 alpha 1 precursor [Ho... GPR126 0.019 G protein-coupled receptor 126 beta 1 precursor [Hom... GPR126 0.019 G protein-coupled receptor 126 alpha 2 precursor [Ho... GPR126 0.019 G protein-coupled receptor 126 beta 2 precursor [Hom... CCDC88B 0.016 coiled-coil domain containing 88 GPR112 0.016 G-protein coupled receptor 112 CEP250 0.013 centrosomal protein 2 MYH7B 0.013 myosin, heavy polypeptide 7B, cardiac muscle, beta ... KIF16B 0.013 kinesin-like motor protein C20orf23 CCT8L2 0.012 T-complex protein 1 MYO5A 0.011 myosin VA isoform 2 MYO5A 0.011 myosin VA isoform 1 USH2A 0.011 usherin isoform B USH2A 0.011 usherin isoform A MYH14 0.011 myosin, heavy chain 14 isoform 1 MYH14 0.011 myosin, heavy chain 14 isoform 2 MYH14 0.011 myosin, heavy chain 14 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.