Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 45580738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45580738 dehydrodolichyl diphosphate synthase isoform b
[Homo sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45580738 dehydrodolichyl diphosphate synthase isoform b [Homo... 673 0.0
gi|45580742 dehydrodolichyl diphosphate synthase isoform a [Homo... 669 0.0
gi|148746195 trichohyalin [Homo sapiens] 36 0.055
gi|20270243 nuclear undecaprenyl pyrophosphate synthase 1 homolo... 35 0.12
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 33 0.27
gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens] 33 0.46
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 31 1.3
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 31 1.8
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 30 2.3
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 30 3.0
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 30 3.0
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 30 3.0
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 30 3.0
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 30 3.0
gi|58530840 desmoplakin isoform I [Homo sapiens] 30 3.9
gi|55742857 ankyrin repeat domain 6 [Homo sapiens] 30 3.9
gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo ... 29 5.1
gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo ... 29 5.1
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 29 5.1
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 29 5.1
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 29 5.1
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 29 5.1
gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens] 29 6.7
gi|32528306 replication factor C large subunit [Homo sapiens] 29 6.7
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 29 6.7
gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens] 29 6.7
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens] 29 6.7
gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens] 28 8.7
gi|40254464 leptin receptor isoform 1 [Homo sapiens] 28 8.7
gi|219555718 synaptonemal complex central element protein 1 isof... 28 8.7
>gi|45580738 dehydrodolichyl diphosphate synthase isoform b [Homo
sapiens]
Length = 333
Score = 673 bits (1737), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL
Sbjct: 181 SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLH 300
FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLH
Sbjct: 241 FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLH 300
Query: 301 KLSARREERVQGFLQALELKRADWLARLGTASA 333
KLSARREERVQGFLQALELKRADWLARLGTASA
Sbjct: 301 KLSARREERVQGFLQALELKRADWLARLGTASA 333
>gi|45580742 dehydrodolichyl diphosphate synthase isoform a [Homo
sapiens]
Length = 334
Score = 669 bits (1725), Expect = 0.0
Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 1/334 (0%)
Query: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE
Sbjct: 1 MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAE 60
Query: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV
Sbjct: 61 TLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRV 120
Query: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP
Sbjct: 121 LGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
Query: 181 SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL
Sbjct: 181 SDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNL 240
Query: 241 FEAILQFQMNHSVL-QKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRL 299
FEAILQFQMNHSVL QKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRL
Sbjct: 241 FEAILQFQMNHSVLQQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRL 300
Query: 300 HKLSARREERVQGFLQALELKRADWLARLGTASA 333
HKLSARREERVQGFLQALELKRADWLARLGTASA
Sbjct: 301 HKLSARREERVQGFLQALELKRADWLARLGTASA 334
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 35.8 bits (81), Expect = 0.055
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 255 QKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFL 314
Q+ R EER+ QQL R+Q EQ LR Q + QLRR + RRE++++
Sbjct: 362 QQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQ----QLRREQQLR--- 414
Query: 315 QALELKRADWLAR 327
+ +L+R L R
Sbjct: 415 REQQLRREQQLRR 427
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 265 RKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARR--EERVQGFLQALELKRA 322
R+ QQL R+Q EQ LR Q + QLRR + + ++ +ER + L+ + +R
Sbjct: 396 RREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERR 455
Query: 323 DWLAR 327
DWL R
Sbjct: 456 DWLKR 460
Score = 34.3 bits (77), Expect = 0.16
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 255 QKARDMYAEERKRQQLERDQATVTE-QLLREGLQASGDAQLRRTRLHKLSARREERVQGF 313
Q+ R EER+ QQL R+Q E QL RE + + QLRR + + ++ R Q
Sbjct: 324 QQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQL 383
Query: 314 LQALELKRADWLAR 327
+ +L+R L R
Sbjct: 384 RREQQLRREQQLRR 397
Score = 29.6 bits (65), Expect = 3.9
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 246 QFQMNHSVLQKARDMYAEE---RKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKL 302
Q++ V Q+ + EE R+RQ+LER Q E+L +E Q + Q +R + +
Sbjct: 1139 QYREEEEVQQEEEQLLREEPEKRRRQELER-QYREEEELQQEEEQLLREEQEKRRQERER 1197
Query: 303 SARREERVQ 311
R EE +Q
Sbjct: 1198 QYREEEELQ 1206
Score = 29.3 bits (64), Expect = 5.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 263 EERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALE 318
EER++Q+L+R+Q EQ L+ + + RR + K EER Q L++ E
Sbjct: 583 EERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEE 638
Score = 28.5 bits (62), Expect = 8.7
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 263 EERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKRA 322
+ER+ QQL R+Q EQ L+ + Q R+ +L +EER + L+ E KR
Sbjct: 500 QERREQQLRREQEERREQRLKRQEEEERLQQRLRSE-QQLRREQEERREQLLKREEEKRL 558
Query: 323 D 323
+
Sbjct: 559 E 559
Score = 28.5 bits (62), Expect = 8.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 265 RKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKRADW 324
R QQL R+Q EQLL+ + + + R RL + +EER L+ E +R
Sbjct: 533 RSEQQLRREQEERREQLLKREEEKRLEQERREQRLKR---EQEERRDQLLKREEERRQQR 589
Query: 325 LAR 327
L R
Sbjct: 590 LKR 592
>gi|20270243 nuclear undecaprenyl pyrophosphate synthase 1 homolog
[Homo sapiens]
Length = 293
Score = 34.7 bits (78), Expect = 0.12
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 31/180 (17%)
Query: 55 FNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKH 114
F+ +A + WC+ +GI ++VY FKR+ S RLM+E K Q+
Sbjct: 114 FSDIASLVVWCMAVGISYISVYDHQ-GIFKRNNS--------------RLMDEILKQQQE 158
Query: 115 GVCIRVLGDLHLLPLDLQELIAQAVQATKNYNK---CFL--NVCFAYTSRHEISNAVREM 169
LL LD + + + ++ C L V + +I A ++
Sbjct: 159 -----------LLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDF 207
Query: 170 AWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQP 229
V Q P+D+ L L +N P PD++++ FL W + +V P
Sbjct: 208 CQLVAQKQKRPTDLDVDTLASLLSSNGCPDPDLVLKFGPVDSTLGFLPWHIRLTEIVSLP 267
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 33.5 bits (75), Expect = 0.27
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 255 QKARDMYAEERKR---------QQLERDQATVTEQLLREGLQASGDAQLRRT--RLHKLS 303
QK R+ AEER+R ++LER++ E+ LR+ Q D +LRR +L KL
Sbjct: 288 QKRREKEAEERQRAEERKQKELEELERERKR--EEKLRKREQKQRDRELRRNQKKLEKLQ 345
Query: 304 ARREERVQGFLQALELK 320
A ++++Q ++ E K
Sbjct: 346 AEEQKQLQEKIKLEERK 362
>gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens]
Length = 528
Score = 32.7 bits (73), Expect = 0.46
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 238 WNLFEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRT 297
W E + FQ + +Q YAE RKR++ E D A+V ++ R+ L+ G RR
Sbjct: 217 WFPKENLFSFQTATTTMQAVFRGYAE-RKRRKRENDSASVIQRNFRKHLRMVGS---RRV 272
Query: 298 RLHKLSARRE 307
+ + RRE
Sbjct: 273 KAQTFAERRE 282
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 260 MYAEERKRQQLER-DQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALE 318
M +E++RQ+LE + EQL R+ ++ +R RL ++ +REER++ LQA E
Sbjct: 528 MDPKEKERQRLENLRRKEEAEQLRRQKVEED-----KRRRLEEVKLKREERLRKVLQARE 582
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 30.8 bits (68), Expect = 1.8
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 250 NHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREER 309
NH + +K + + + +Q +D T++E+L+RE Q D + L A + +
Sbjct: 503 NHQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQLQSD-------METLKADKARQ 555
Query: 310 VQGFLQALE-LKRADWLAR 327
++ Q + L RA W R
Sbjct: 556 IKDLEQEKDHLNRAMWSLR 574
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 30.4 bits (67), Expect = 2.3
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 264 ERKRQQLER-DQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALE 318
E++RQ+LE + EQL R+ ++ +R RL ++ +REER++ LQA E
Sbjct: 536 EKERQRLENLRRKEEAEQLRRQKVEED-----KRRRLEEVKLKREERLRKVLQARE 586
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 30.0 bits (66), Expect = 3.0
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 235 YTFWNLF---EAILQFQMNHSVLQKARDMYAEERKRQQ--------LERDQATVTEQ--L 281
+ +W LF + +LQ +Q D + ++RQQ LE+ + +TE+ L
Sbjct: 832 WQWWRLFTKVKPLLQVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNL 891
Query: 282 LREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELK 320
L+E LQA + + A +++ ++ L +E +
Sbjct: 892 LQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEAR 930
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 30.0 bits (66), Expect = 3.0
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 235 YTFWNLF---EAILQFQMNHSVLQKARDMYAEERKRQQ--------LERDQATVTEQ--L 281
+ +W LF + +LQ +Q D + ++RQQ LE+ + +TE+ L
Sbjct: 839 WQWWRLFTKVKPLLQVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNL 898
Query: 282 LREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELK 320
L+E LQA + + A +++ ++ L +E +
Sbjct: 899 LQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEAR 937
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 30.0 bits (66), Expect = 3.0
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 235 YTFWNLF---EAILQFQMNHSVLQKARDMYAEERKRQQ--------LERDQATVTEQ--L 281
+ +W LF + +LQ +Q D + ++RQQ LE+ + +TE+ L
Sbjct: 839 WQWWRLFTKVKPLLQVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNL 898
Query: 282 LREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELK 320
L+E LQA + + A +++ ++ L +E +
Sbjct: 899 LQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEAR 937
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 30.0 bits (66), Expect = 3.0
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 235 YTFWNLF---EAILQFQMNHSVLQKARDMYAEERKRQQ--------LERDQATVTEQ--L 281
+ +W LF + +LQ +Q D + ++RQQ LE+ + +TE+ L
Sbjct: 832 WQWWRLFTKVKPLLQVTRQEEEMQAKEDELQKTKERQQKAENELKELEQKHSQLTEEKNL 891
Query: 282 LREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELK 320
L+E LQA + + A +++ ++ L +E +
Sbjct: 892 LQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEAR 930
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 30.0 bits (66), Expect = 3.0
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 255 QKARDMYAEERKR--QQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREE---- 308
Q+ AEER+R QQ R +A + E LR+ L+ S A R R R E+
Sbjct: 791 QRLYSEVAEERERLGQQAARQRAELEE--LRQQLEESSSALTRALRAEFEKGREEQERRH 848
Query: 309 --RVQGFLQALELKRADWLA 326
+ Q LEL+R W A
Sbjct: 849 QMELNTLKQQLELERQAWEA 868
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 29.6 bits (65), Expect = 3.9
Identities = 17/80 (21%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 239 NLFEAILQFQMNHSVLQKARDMYAEERKRQ-----QLERDQATVTEQLLREGLQASGDAQ 293
+L EA Q + +++ + + EE KR+ +L + + E+++ Q +
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 294 LRRTRLHKLSARREERVQGF 313
+ +T +H+L+ ++EE G+
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGY 1391
>gi|55742857 ankyrin repeat domain 6 [Homo sapiens]
Length = 722
Score = 29.6 bits (65), Expect = 3.9
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 244 ILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLS 303
+L+F S L+K R+ EER+ Q + RD+ ++ + G S + +
Sbjct: 265 VLRFSRGRS-LRKKRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAV--------- 314
Query: 304 ARREERVQGFLQALELKRA 322
AR+EE + FL A RA
Sbjct: 315 ARKEEAREEFLSASPEPRA 333
>gi|221554543 suppressor of cancer cell invasion isoform 2 [Homo
sapiens]
Length = 606
Score = 29.3 bits (64), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 265 RKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHK 301
R Q LER+ + Q+ + G+Q S D RR HK
Sbjct: 299 RMLQALEREPMNLASQMNKPGMQESADKPTRRENPHK 335
>gi|116256473 suppressor of cancer cell invasion isoform 1 [Homo
sapiens]
Length = 629
Score = 29.3 bits (64), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 265 RKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHK 301
R Q LER+ + Q+ + G+Q S D RR HK
Sbjct: 322 RMLQALEREPMNLASQMNKPGMQESADKPTRRENPHK 358
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 29.3 bits (64), Expect = 5.1
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 228 QPVLWPEYTFWNL-------FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQ 280
QP +W + W+L A+ Q Q L+KA+ E+ +R+ R + E+
Sbjct: 694 QPTVWEGGSVWDLPLDTTTPGPALEQLQQ----LEKAKAAKLEQERREAEMRAKREEEER 749
Query: 281 LLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKR 321
+E L+ + LRR + + R EE + Q L+R
Sbjct: 750 KRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRR 790
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 29.3 bits (64), Expect = 5.1
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 228 QPVLWPEYTFWNL-------FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQ 280
QP +W + W+L A+ Q Q L+KA+ E+ +R+ R + E+
Sbjct: 721 QPTVWEGGSVWDLPLDTTTPGPALEQLQQ----LEKAKAAKLEQERREAEMRAKREEEER 776
Query: 281 LLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKR 321
+E L+ + LRR + + R EE + Q L+R
Sbjct: 777 KRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRR 817
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 29.3 bits (64), Expect = 5.1
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 228 QPVLWPEYTFWNL-------FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQ 280
QP +W + W+L A+ Q Q L+KA+ E+ +R+ R + E+
Sbjct: 700 QPTVWEGGSVWDLPLDTTTPGPALEQLQQ----LEKAKAAKLEQERREAEMRAKREEEER 755
Query: 281 LLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKR 321
+E L+ + LRR + + R EE + Q L+R
Sbjct: 756 KRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRR 796
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 29.3 bits (64), Expect = 5.1
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 228 QPVLWPEYTFWNL-------FEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQ 280
QP +W + W+L A+ Q Q L+KA+ E+ +R+ R + E+
Sbjct: 700 QPTVWEGGSVWDLPLDTTTPGPALEQLQQ----LEKAKAAKLEQERREAEMRAKREEEER 755
Query: 281 LLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKR 321
+E L+ + LRR + + R EE + Q L+R
Sbjct: 756 KRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRR 796
>gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens]
Length = 530
Score = 28.9 bits (63), Expect = 6.7
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 238 WNLFEAILQFQMNHSVLQKARDM--YAEERKRQQLERDQATVTEQLLREGLQASGDAQLR 295
W E + FQ + +Q YAE RKR++ E D A+V ++ R+ L+ G R
Sbjct: 217 WFPKENLFSFQTATTTMQAISVFRGYAE-RKRRKRENDSASVIQRNFRKHLRMVGS---R 272
Query: 296 RTRLHKLSARRE 307
R + + RRE
Sbjct: 273 RVKAQTFAERRE 284
>gi|32528306 replication factor C large subunit [Homo sapiens]
Length = 1147
Score = 28.9 bits (63), Expect = 6.7
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 243 AILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHK 301
++L + SV + + M A +RK D++ + ++ + + LQ DA+L R +LH+
Sbjct: 164 SVLDYFGTGSVQRSNKKMVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELER-QLHE 221
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 28.9 bits (63), Expect = 6.7
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 17/77 (22%)
Query: 254 LQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGF 313
LQK + Y EE++R++ E + E+ LRE L A+REE VQ
Sbjct: 2591 LQKQQAQYLEEKRRREREWE---ARERELRE--------------REALLAQREEEVQQG 2633
Query: 314 LQALELKRADWLARLGT 330
Q LE +R + + GT
Sbjct: 2634 QQDLEKEREELQQKKGT 2650
>gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens]
Length = 1058
Score = 28.9 bits (63), Expect = 6.7
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 17/77 (22%)
Query: 254 LQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGF 313
LQK + Y EE++R++ E + E+ LRE L A+REE VQ
Sbjct: 832 LQKQQAQYLEEKRRREREWE---ARERELRE--------------REALLAQREEEVQQG 874
Query: 314 LQALELKRADWLARLGT 330
Q LE +R + + GT
Sbjct: 875 QQDLEKEREELQQKKGT 891
>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
Length = 2813
Score = 28.9 bits (63), Expect = 6.7
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 17/77 (22%)
Query: 254 LQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGF 313
LQK + Y EE++R++ E + E+ LRE L A+REE VQ
Sbjct: 2587 LQKQQAQYLEEKRRREREWE---ARERELRE--------------REALLAQREEEVQQG 2629
Query: 314 LQALELKRADWLARLGT 330
Q LE +R + + GT
Sbjct: 2630 QQDLEKEREELQQKKGT 2646
>gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]
Length = 403
Score = 28.5 bits (62), Expect = 8.7
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 271 ERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKR--ADW 324
E+D Q L G + + D + R L ++ A ++ER+ FL+ +++ R DW
Sbjct: 167 EKDANQTRLQQLLLGAELNRDLRFRLKHLLRMYANKQERLPNFLELIKMIREEEDW 222
>gi|40254464 leptin receptor isoform 1 [Homo sapiens]
Length = 1165
Score = 28.5 bits (62), Expect = 8.7
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 172 GVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVL 231
G EQGL++ S + KC + SP D +S E+ F + H ++
Sbjct: 999 GEEQGLINSS------VTKCFSSKNSPLKDSFSNSSWEIEAQAFFILSDQH-----PNII 1047
Query: 232 WPEYTFWNLFEAILQFQMN 250
P TF + +L+ + N
Sbjct: 1048 SPHLTFSEGLDELLKLEGN 1066
>gi|219555718 synaptonemal complex central element protein 1 isoform
4 [Homo sapiens]
Length = 351
Score = 28.5 bits (62), Expect = 8.7
Identities = 55/269 (20%), Positives = 100/269 (37%), Gaps = 23/269 (8%)
Query: 48 QEGHSQGFNKLAETLRWCLNLGILE--VTVYAFSIENFKRSKSEVDGLMDLARQKFSRLM 105
Q+ SQ L E ++ +G LE V V I +++K + + + AR L
Sbjct: 26 QDTSSQKIEDLMEMVQKLQKVGSLEPRVEVLINRINEVQQAKKKANKDLGEARTICEALQ 85
Query: 106 EEKEKLQKHGVCIRVL-----GDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRH 160
+E + L V ++ + L +L L QE ++A + +C +
Sbjct: 86 KELDSLHGEKVHLKEILSKKQETLRILRLHCQEKESEAHRKHTMLQECKERISALNLQIE 145
Query: 161 EISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQT 220
E N R++ E+ L D + L D + + L + ++ + L+ T
Sbjct: 146 EEKNKQRQLRLAFEEQLEDLMGQHKDLWDFHMPERLAKEICALDSSKEQLLKEEKLVKAT 205
Query: 221 SHS--------CLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARDMYAE--------E 264
C P E F EA Q+ +KA ++ A +
Sbjct: 206 LEDVKHQLCSLCGAEGPSTLDEGLFLRSQEAAATVQLFQEEHRKAEELLAAAAQRHQQLQ 265
Query: 265 RKRQQLERDQATVTEQLLREGLQASGDAQ 293
+K QQ ++ + + E+L + G+Q AQ
Sbjct: 266 QKCQQQQQKRQRLKEELEKHGMQVPAQAQ 294
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,884,505
Number of Sequences: 37866
Number of extensions: 488667
Number of successful extensions: 1882
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1821
Number of HSP's gapped (non-prelim): 79
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.