Guide to the Human Genome
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Name: SCAI Sequence: fasta or formatted (606aa) NCBI GI: 221554543
Description:

suppressor of cancer cell invasion isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {629aa} suppressor of cancer cell invasion isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         31           2
 C cysteine            1.2          7           1
 D aspartate           5.4         33           2
 E glutamate           5.9         36           1
 F phenylalanine       5.8         35           2
 G glycine             4.6         28           2
 H histidine           2.0         12           1
 I isoleucine          4.6         28           2
 K lysine              5.3         32           2
 L leucine            11.7         71           3
 M methionine          2.5         15           1
 N asparagine          5.1         31           2
 P proline             4.8         29           2
 Q glutamine           6.1         37           3
 R arginine            7.3         44           2
 S serine              6.8         41           2
 T threonine           5.1         31           1
 V valine              5.3         32           2
 W tryptophan          0.8          5           1
 Y tyrosine            4.6         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of cancer cell invasion isoform 2 
SCAI                  0.988   suppressor of cancer cell invasion isoform 1 
MEP1B                 0.006   meprin A beta 
IFT74                 0.006   coiled-coil domain containing 2 isoform b 
IFT74                 0.006   coiled-coil domain containing 2 isoform a 
IFT74                 0.006   coiled-coil domain containing 2 isoform a 
IFT74                 0.006   coiled-coil domain containing 2 isoform a 
USP9Y                 0.006   ubiquitin specific protease 9, Y-linked 
RIF1                  0.005   RAP1 interacting factor 1 
AGT                   0.005   angiotensinogen preproprotein 
USP9X                 0.005   ubiquitin specific protease 9, X-linked isoform 4 [...
USP9X                 0.005   ubiquitin specific protease 9, X-linked isoform 3 [...
LY75                  0.005   lymphocyte antigen 75 
EIF4G3                0.005   eukaryotic translation initiation factor 4 gamma, 3 ...
SUNC1                 0.004   Sad1 and UNC84 domain containing 1 
SUNC1                 0.004   Sad1 and UNC84 domain containing 1 
DHDDS                 0.004   dehydrodolichyl diphosphate synthase isoform a [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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