Guide to the Human Genome
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Name: DHDDS Sequence: fasta or formatted (333aa) NCBI GI: 45580738
Description:

dehydrodolichyl diphosphate synthase isoform b

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [334aa] dehydrodolichyl diphosphate synthase isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         25           1
 C cysteine            2.4          8           1
 D aspartate           4.2         14           1
 E glutamate           8.4         28           2
 F phenylalanine       4.2         14           1
 G glycine             4.8         16           1
 H histidine           2.7          9           1
 I isoleucine          4.2         14           2
 K lysine              5.7         19           2
 L leucine            13.5         45           2
 M methionine          2.4          8           1
 N asparagine          3.6         12           1
 P proline             2.4          8           1
 Q glutamine           6.6         22           2
 R arginine            8.1         27           2
 S serine              6.3         21           1
 T threonine           3.6         12           1
 V valine              4.8         16           1
 W tryptophan          2.4          8           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dehydrodolichyl diphosphate synthase isoform b [Homo... 
DHDDS                 0.994   dehydrodolichyl diphosphate synthase isoform a [Homo...
TCHH                  0.017   trichohyalin 
NUS1                  0.015   nuclear undecaprenyl pyrophosphate synthase 1 homolo...
SFRS17A               0.012   DNA segment on chromosome X and Y (unique) 155 expre...
NELF                  0.012   nasal embryonic LHRH factor isoform b 
INCENP                0.009   inner centromere protein antigens 135/155kDa isofor...
CCDC88C               0.009   DVL-binding protein DAPLE 
INCENP                0.008   inner centromere protein antigens 135/155kDa isofor...
MYH11                 0.008   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.008   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.008   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.008   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
AZI1                  0.008   5-azacytidine induced 1 isoform a 
DSP                   0.008   desmoplakin isoform I 
ANKRD6                0.008   ankyrin repeat domain 6 
SCAI                  0.006   suppressor of cancer cell invasion isoform 2 
SCAI                  0.006   suppressor of cancer cell invasion isoform 1 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform b 
NELF                  0.006   nasal embryonic LHRH factor isoform a 
RFC1                  0.006   replication factor C large subunit 
AKAP13                0.006   A-kinase anchor protein 13 isoform 1 
AKAP13                0.006   A-kinase anchor protein 13 isoform 3 
AKAP13                0.006   A-kinase anchor protein 13 isoform 2 
ZCCHC18               0.005   zinc finger, CCHC domain containing 18 
LEPR                  0.005   leptin receptor isoform 1 
SYCE1                 0.005   synaptonemal complex central element protein 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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