BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|45580709 unc-93 homolog B1 [Homo sapiens] (597 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|45580709 unc-93 homolog B1 [Homo sapiens] 1220 0.0 gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 438 e-123 gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 418 e-117 gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 418 e-117 gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 369 e-102 gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] 120 4e-27 gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] 115 9e-26 gi|40548372 tetratricopeptide repeat domain 15 [Homo sapiens] 37 0.040 gi|52353302 transmembrane protein 198 [Homo sapiens] 37 0.052 gi|5729790 CCCTC-binding factor [Homo sapiens] 37 0.067 gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 36 0.088 gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 36 0.088 gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 36 0.088 gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 36 0.088 gi|59814146 BTB (POZ) domain containing 1 isoform 2 [Homo sapiens] 36 0.088 gi|13376848 BTB (POZ) domain containing 1 isoform 1 [Homo sapiens] 36 0.088 gi|185136021 spinster homolog 2 [Homo sapiens] 35 0.20 gi|4505949 proopiomelanocortin preproprotein [Homo sapiens] 35 0.20 gi|80861463 proopiomelanocortin preproprotein [Homo sapiens] 35 0.20 gi|195947401 doublesex and mab-3 related transcription factor 2 ... 35 0.26 gi|5729806 doublesex and mab-3 related transcription factor 2 is... 35 0.26 gi|153945850 doublesex and mab-3 related transcription factor 2 ... 35 0.26 gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.33 gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.33 gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.33 gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.33 gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.33 gi|93204881 Rab interacting lysosomal protein [Homo sapiens] 34 0.44 gi|13236549 major facilitator superfamily domain containing 11 [... 34 0.44 gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 33 0.57 >gi|45580709 unc-93 homolog B1 [Homo sapiens] Length = 597 Score = 1220 bits (3156), Expect = 0.0 Identities = 597/597 (100%), Positives = 597/597 (100%) Query: 1 MEAEPPLYPMAGAAGPQGDEDLLGVPDGPEAPLDELVGAYPNYNEEEEERRYYRRKRLGV 60 MEAEPPLYPMAGAAGPQGDEDLLGVPDGPEAPLDELVGAYPNYNEEEEERRYYRRKRLGV Sbjct: 1 MEAEPPLYPMAGAAGPQGDEDLLGVPDGPEAPLDELVGAYPNYNEEEEERRYYRRKRLGV 60 Query: 61 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI 120 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI Sbjct: 61 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI 120 Query: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG Sbjct: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 Query: 181 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI 240 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI Sbjct: 181 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI 240 Query: 241 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM 300 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM Sbjct: 241 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM 300 Query: 301 LLVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDYRLRHLVPFFIYSGFEVLFACTG 360 LLVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDYRLRHLVPFFIYSGFEVLFACTG Sbjct: 301 LLVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDYRLRHLVPFFIYSGFEVLFACTG 360 Query: 361 IALGYGVCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILF 420 IALGYGVCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILF Sbjct: 361 IALGYGVCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILF 420 Query: 421 FWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV 480 FWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV Sbjct: 421 FWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV 480 Query: 481 AIFTVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYR 540 AIFTVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYR Sbjct: 481 AIFTVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYR 540 Query: 541 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ Sbjct: 541 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 >gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo sapiens] Length = 319 Score = 438 bits (1127), Expect = e-123 Identities = 218/232 (93%), Positives = 221/232 (95%), Gaps = 2/232 (0%) Query: 364 GYGVCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWA 423 GYGVCSVGLE LAYLLV YSLGASA SLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWA Sbjct: 4 GYGVCSVGLEWLAYLLVPYSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWA 63 Query: 424 PVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIF 483 PVPRVLQHSWILYVAAALW VGS+LNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIF Sbjct: 64 PVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIF 123 Query: 484 TVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLE 543 TVYLGSSLHMKAKLA+LLVTLVAA VSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLE Sbjct: 124 TVYLGSSLHMKAKLALLLVTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLE 183 Query: 544 EDNSDESDAEGEHGDG--AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDG 593 EDNSDESDAEG+ GDG AE EAPPAGPRPGPEPAGLGRRPCPYEQAQG G Sbjct: 184 EDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMG 235 >gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 312 Score = 418 bits (1074), Expect = e-117 Identities = 206/217 (94%), Positives = 210/217 (96%), Gaps = 1/217 (0%) Query: 380 VAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAA 439 +AYSLG SAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWIL VAA Sbjct: 1 MAYSLGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAA 60 Query: 440 ALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAV 499 ALWGVGSALN TGLSTLLGILY+DKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLA+ Sbjct: 61 ALWGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAM 120 Query: 500 LLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDG 559 LLVTLVAAAVSYLRMEQKLRRGVAP QPRIPRPQHKVRGYRYL EDNS+ESDAE EHGDG Sbjct: 121 LLVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRGYRYL-EDNSEESDAEDEHGDG 179 Query: 560 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEE 596 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQ GDGPEE Sbjct: 180 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEE 216 >gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 529 Score = 418 bits (1074), Expect = e-117 Identities = 206/217 (94%), Positives = 210/217 (96%), Gaps = 1/217 (0%) Query: 380 VAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAA 439 +AYSLG SAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWIL VAA Sbjct: 1 MAYSLGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAA 60 Query: 440 ALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAV 499 ALWGVGSALN TGLSTLLGILY+DKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLA+ Sbjct: 61 ALWGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAM 120 Query: 500 LLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDG 559 LLVTLVAAAVSYLRMEQKLRRGVAP QPRIPRPQHKVRGYRYL EDNS+ESDAE EHGDG Sbjct: 121 LLVTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRGYRYL-EDNSEESDAEDEHGDG 179 Query: 560 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEE 596 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQ GDGPEE Sbjct: 180 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEE 216 >gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 503 Score = 369 bits (946), Expect = e-102 Identities = 181/191 (94%), Positives = 184/191 (96%), Gaps = 1/191 (0%) Query: 406 VAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKE 465 +AGAGVHLLLTFILFFWAPVPRVLQH WIL VAAALWGVGSALN TGLSTLLGILYEDKE Sbjct: 1 MAGAGVHLLLTFILFFWAPVPRVLQHIWILCVAAALWGVGSALNNTGLSTLLGILYEDKE 60 Query: 466 RQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPR 525 RQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLA+LLVTLVAAAVSYLRMEQKLRRGVAP Sbjct: 61 RQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVAPP 120 Query: 526 QPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPY 585 QPRIPRPQHKVRGYRYL EDNS+ESDAE EHGDGAEEEAPPAGPRPGPEPAGLGRRPCPY Sbjct: 121 QPRIPRPQHKVRGYRYL-EDNSEESDAEDEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPY 179 Query: 586 EQAQGGDGPEE 596 EQAQ GDGPEE Sbjct: 180 EQAQRGDGPEE 190 >gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] Length = 457 Score = 120 bits (301), Expect = 4e-27 Identities = 115/461 (24%), Positives = 192/461 (41%), Gaps = 50/461 (10%) Query: 61 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI 120 L+NVL S G +L + Y GL +Q L Y E G L + ML+ Sbjct: 5 LRNVLVVSFGFLLLFTAYGGLQSLQSSL-----YSEEGLGVTALSTLYGGMLL------- 52 Query: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 +++ P+LI G K + L++ Y F N++ +YTL+P+++ LG+ PLW++ Sbjct: 53 SSMFLPPLLIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQC 112 Query: 181 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI 240 Y+T + E + + +D + IF+ F S L I Sbjct: 113 TYLTITGNTHAEKAGKRGKDMVNQ---------------YFGIFFLIFQSSGVWGNL--I 155 Query: 241 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM 300 L TL Q + L T P + + + LA+ Sbjct: 156 SSLVFGQTPSQETLPEEQLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAV 215 Query: 301 LLVLGLCGAAYRPTEEIDLRSVG-------WGNIFQLPFKHVRDYRLRHLVPFFIYSGFE 353 L++ A +P ++ S G W + FK RD RL L+ +YSG + Sbjct: 216 LMI----AAFLQPIRDVQRESEGEKKSVPFWSTLLST-FKLYRDKRLCLLILLPLYSGLQ 270 Query: 354 VLFACTGIALGYGVCSVGLERLAYLLVAYSLGASAASLL-GLLGLWLPRPVPLVAGAGVH 412 F + Y C++G++ + Y+++ +S + S+L G + + R V V GA H Sbjct: 271 QGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTH 330 Query: 413 LLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFT 472 + L W P H + +V + LWGV A+ +T + L G+L+E + ++ F Sbjct: 331 VSCMIALLLWRP---RADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFA 385 Query: 473 IYHWWQAVAIFTVYLGSSLHM--KAKLAVLLVTLVAAAVSY 511 Y W+A+ F + G S+ + KL +LL L V+Y Sbjct: 386 NYRLWEALG-FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425 >gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] Length = 415 Score = 115 bits (289), Expect = 9e-26 Identities = 116/454 (25%), Positives = 195/454 (42%), Gaps = 78/454 (17%) Query: 61 LKNVLAASAGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPI 120 L+NVL S G +L + Y GL +Q L Y E G L + ML+ Sbjct: 5 LRNVLVVSFGFLLLFTAYGGLQSLQSSL-----YSEEGLGVTALSTLYGGMLL------- 52 Query: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 +++ P+LI G K + L++ Y F N++ +YTL+P+++ LG+ PLW++ Sbjct: 53 SSMFLPPLLIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQC 112 Query: 181 NYITRMAQKYHEYSHYKEQDGQGMKQRPPRGSHAPYLLVFQAIFYSFFHLSFACAQLPMI 240 Y+T + E + + +D +V Q ++ F L F Sbjct: 113 TYLTITGNTHAEKAGKRGKD-----------------MVNQ--YFGIFFLIF-------- 145 Query: 241 YFLNHYLYDLNHTLYNVQSCGTNSHGILSGFNKTVLRTLPRSGNLIVVESVLMAVAFLAM 300 QS G + I S V P G+ ++ +VLM AFL Sbjct: 146 -----------------QSSGVWGNLISS----LVFGQTPSQGSGVL--AVLMIAAFLQP 182 Query: 301 LLVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDYRLRHLVPFFIYSGFEVLFACTG 360 + + + E + +SV + + FK RD RL L+ +YSG + F + Sbjct: 183 IRDV-------QRESEGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSE 235 Query: 361 IALGYGVCSVGLERLAYLLVAYSLGASAASLL-GLLGLWLPRPVPLVAGAGVHLLLTFIL 419 Y C++G++ + Y+++ +S + S+L G + + R V V GA H+ L Sbjct: 236 YTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIAL 295 Query: 420 FFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQA 479 W P H + +V + LWGV A+ +T + L G+L+E + ++ F Y W+A Sbjct: 296 LLWRP---RADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFANYRLWEA 350 Query: 480 VAIFTVYLGSSLHM--KAKLAVLLVTLVAAAVSY 511 + F + G S+ + KL +LL L V+Y Sbjct: 351 LG-FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 383 >gi|40548372 tetratricopeptide repeat domain 15 [Homo sapiens] Length = 735 Score = 37.4 bits (85), Expect = 0.040 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 6/53 (11%) Query: 547 SDESDAEGEHGD--GAEEEAPPAGPR-PGPEPAGLGRRPCPYEQAQGGDGPEE 596 SD ++EG+ GD +EA P G PGPEPAG P P +A G PE+ Sbjct: 73 SDSPNSEGDAGDLGRVRDEAEPGGEGDPGPEPAG---TPSPSGEADGDCAPED 122 >gi|52353302 transmembrane protein 198 [Homo sapiens] Length = 360 Score = 37.0 bits (84), Expect = 0.052 Identities = 66/247 (26%), Positives = 100/247 (40%), Gaps = 43/247 (17%) Query: 357 ACTGIALGYG---------VCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPR----PV 403 A GIALG G V SVGL + LL L +AA+LLG + P P+ Sbjct: 94 ASAGIALGIGLLCGLVAMLVRSVGLFLVGLLL---GLLLAAAALLGSAPYYQPGSVWGPL 150 Query: 404 PLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYED 463 L+ G G LL + W PR L AAL + +A + LLG + Sbjct: 151 GLLLGGG--LLCALLTLRW---PRPLTTLATAVTGAAL--IATAADYFAELLLLGRYVVE 203 Query: 464 KERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVA 523 + R + + W++ A+ ++ SL + VL+ V A G + Sbjct: 204 RLRAAPVPPLC--WRSWALLALWPLLSL-----MGVLVQWRVTA------------EGDS 244 Query: 524 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPC 583 + I R + +V+ R ++++ E + + A P A PRPGP RRP Sbjct: 245 HTEVVISRQRRRVQLMRIRQQEDRKEKRRK-KRPPRAPLRGPRAPPRPGPPDPAYRRRPV 303 Query: 584 PYEQAQG 590 P ++ G Sbjct: 304 PIKRFNG 310 >gi|5729790 CCCTC-binding factor [Homo sapiens] Length = 727 Score = 36.6 bits (83), Expect = 0.067 Identities = 19/54 (35%), Positives = 28/54 (51%) Query: 537 RGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQG 590 R R +ED+SD +AE + D +EE P P PEP + P P ++ +G Sbjct: 600 RKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRG 653 >gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1 (predicted) [Homo sapiens] Length = 290 Score = 36.2 bits (82), Expect = 0.088 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 523 APRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPG-PEPAGLGRR 581 AP R P H+ R EE+ DE++A G+EEE P+ +PG P G GRR Sbjct: 90 APTTIRDPEAGHQERP----EEEGEDEAEASS----GSEEEPAPSSLQPGSPASPGPGRR 141 Query: 582 PCPYEQAQG 590 C + +G Sbjct: 142 LCSLDVLRG 150 >gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1 (predicted) [Homo sapiens] Length = 290 Score = 36.2 bits (82), Expect = 0.088 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 523 APRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPG-PEPAGLGRR 581 AP R P H+ R EE+ DE++A G+EEE P+ +PG P G GRR Sbjct: 90 APTTIRDPEAGHQERP----EEEGEDEAEASS----GSEEEPAPSSLQPGSPASPGPGRR 141 Query: 582 PCPYEQAQG 590 C + +G Sbjct: 142 LCSLDVLRG 150 >gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] Length = 290 Score = 36.2 bits (82), Expect = 0.088 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 523 APRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPG-PEPAGLGRR 581 AP R P H+ R EE+ DE++A G+EEE P+ +PG P G GRR Sbjct: 90 APTTIRDPEAGHQERP----EEEGEDEAEASS----GSEEEPAPSSLQPGSPASPGPGRR 141 Query: 582 PCPYEQAQG 590 C + +G Sbjct: 142 LCSLDVLRG 150 >gi|116256464 hypothetical protein LOC343990 [Homo sapiens] Length = 962 Score = 36.2 bits (82), Expect = 0.088 Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 12/62 (19%) Query: 529 IPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLG---RRPCPY 585 +P PQH G R L E +S GD A A PAGPR P+ A R PCP Sbjct: 619 LPEPQHAKPGPRKLAERGPQDS------GDRA---ASPAGPRKSPQEAAAAPGTREPCPA 669 Query: 586 EQ 587 Q Sbjct: 670 AQ 671 >gi|59814146 BTB (POZ) domain containing 1 isoform 2 [Homo sapiens] Length = 385 Score = 36.2 bits (82), Expect = 0.088 Identities = 16/28 (57%), Positives = 17/28 (60%) Query: 552 AEGEHGDGAEEEAPPAGPRPGPEPAGLG 579 A GE GAE E PAGP P P P+ LG Sbjct: 8 AAGEQASGAEAEPGPAGPPPPPSPSSLG 35 >gi|13376848 BTB (POZ) domain containing 1 isoform 1 [Homo sapiens] Length = 482 Score = 36.2 bits (82), Expect = 0.088 Identities = 16/28 (57%), Positives = 17/28 (60%) Query: 552 AEGEHGDGAEEEAPPAGPRPGPEPAGLG 579 A GE GAE E PAGP P P P+ LG Sbjct: 8 AAGEQASGAEAEPGPAGPPPPPSPSSLG 35 >gi|185136021 spinster homolog 2 [Homo sapiens] Length = 549 Score = 35.0 bits (79), Expect = 0.20 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 13/104 (12%) Query: 388 AASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSA 447 AA + G LG R V L G +TF F +P+ Q+ W+L ++ L G+G A Sbjct: 154 AAPIFGYLGDRFNRKVILSCGIFFWSAVTFSSSF---IPQ--QYFWLLVLSRGLVGIGEA 208 Query: 448 LNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFTVYLGSSL 491 T T++G L+ R + Y F + LGS L Sbjct: 209 SYSTIAPTIIGDLFTKNTRTLMLSVFY--------FAIPLGSGL 244 >gi|4505949 proopiomelanocortin preproprotein [Homo sapiens] Length = 267 Score = 35.0 bits (79), Expect = 0.20 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 501 LVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGA 560 L+ + A L E + G QP P+ V G+ + S + G G G Sbjct: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102 Query: 561 EEEAPPAG------PRPGPEPAGLGRRPCPYE 586 + E AG P GPEP G +P P E Sbjct: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134 >gi|80861463 proopiomelanocortin preproprotein [Homo sapiens] Length = 267 Score = 35.0 bits (79), Expect = 0.20 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 501 LVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGA 560 L+ + A L E + G QP P+ V G+ + S + G G G Sbjct: 43 LLECIRACKPDLSAETPMFPGNGDEQPLTENPRKYVMGHFRWDRFGRRNSSSSGSSGAGQ 102 Query: 561 EEEAPPAG------PRPGPEPAGLGRRPCPYE 586 + E AG P GPEP G +P P E Sbjct: 103 KREDVSAGEDCGPLPEGGPEPRSDGAKPGPRE 134 >gi|195947401 doublesex and mab-3 related transcription factor 2 isoform 1 [Homo sapiens] Length = 226 Score = 34.7 bits (78), Expect = 0.26 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 543 EEDNSDESDAEGEHGDGAEEEAPPAGP-----RPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E+D+ + DAE E GDG E A P P R GP+P R P + + G GP E+ Sbjct: 50 EDDDGVDEDAE-EEGDGEEAGASPGMPGQPEQRGGPQP----RPPLAPQASPAGTGPRER 104 >gi|5729806 doublesex and mab-3 related transcription factor 2 isoform 1 [Homo sapiens] Length = 226 Score = 34.7 bits (78), Expect = 0.26 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 543 EEDNSDESDAEGEHGDGAEEEAPPAGP-----RPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E+D+ + DAE E GDG E A P P R GP+P R P + + G GP E+ Sbjct: 50 EDDDGVDEDAE-EEGDGEEAGASPGMPGQPEQRGGPQP----RPPLAPQASPAGTGPRER 104 >gi|153945850 doublesex and mab-3 related transcription factor 2 isoform 2 [Homo sapiens] Length = 561 Score = 34.7 bits (78), Expect = 0.26 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 543 EEDNSDESDAEGEHGDGAEEEAPPAGP-----RPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E+D+ + DAE E GDG E A P P R GP+P R P + + G GP E+ Sbjct: 50 EDDDGVDEDAE-EEGDGEEAGASPGMPGQPEQRGGPQP----RPPLAPQASPAGTGPRER 104 >gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 isoform 1 [Homo sapiens] Length = 1599 Score = 34.3 bits (77), Expect = 0.33 Identities = 16/36 (44%), Positives = 19/36 (52%) Query: 562 EEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E PPAG PGPE G G P P E + D E++ Sbjct: 545 ENQPPAGSNPGPESEGSGVPPRPEEADETWDSKEDK 580 >gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 isoform 2 [Homo sapiens] Length = 1512 Score = 34.3 bits (77), Expect = 0.33 Identities = 16/36 (44%), Positives = 19/36 (52%) Query: 562 EEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E PPAG PGPE G G P P E + D E++ Sbjct: 458 ENQPPAGSNPGPESEGSGVPPRPEEADETWDSKEDK 493 >gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 isoform 3 [Homo sapiens] Length = 1435 Score = 34.3 bits (77), Expect = 0.33 Identities = 16/36 (44%), Positives = 19/36 (52%) Query: 562 EEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E PPAG PGPE G G P P E + D E++ Sbjct: 381 ENQPPAGSNPGPESEGSGVPPRPEEADETWDSKEDK 416 >gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 isoform 1 [Homo sapiens] Length = 1599 Score = 34.3 bits (77), Expect = 0.33 Identities = 16/36 (44%), Positives = 19/36 (52%) Query: 562 EEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E PPAG PGPE G G P P E + D E++ Sbjct: 545 ENQPPAGSNPGPESEGSGVPPRPEEADETWDSKEDK 580 >gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 isoform 4 [Homo sapiens] Length = 1403 Score = 34.3 bits (77), Expect = 0.33 Identities = 16/36 (44%), Positives = 19/36 (52%) Query: 562 EEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEEQ 597 E PPAG PGPE G G P P E + D E++ Sbjct: 349 ENQPPAGSNPGPESEGSGVPPRPEEADETWDSKEDK 384 >gi|93204881 Rab interacting lysosomal protein [Homo sapiens] Length = 401 Score = 33.9 bits (76), Expect = 0.44 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 530 PRPQHKVRG-----YRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPC 583 P P+ K++ YR E + DE+ + G EEEA P P P P + L C Sbjct: 334 PPPESKIQSFFGLWYRGKAESSEDETSSPAPSKLGGEEEAQPQSPAPDPPCSALHEHLC 392 >gi|13236549 major facilitator superfamily domain containing 11 [Homo sapiens] Length = 449 Score = 33.9 bits (76), Expect = 0.44 Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 A+ L TP ++ G + MF + Y+++++ ++ ++V +G+A LW + G Sbjct: 61 ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120 Query: 181 NYIT 184 N +T Sbjct: 121 NCLT 124 Score = 33.5 bits (75), Expect = 0.57 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 25/197 (12%) Query: 349 YSGFEVLF------ACTGIALGYGVCSVGLERLAYLLVAYS--LGASAASLLGLLGLWLP 400 Y+G E+ F C G +G L L+ + + LG S LL + Sbjct: 248 YTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGR 307 Query: 401 RPVPLVAGAGVHLLLTFILFFW----APVPRVLQHSWILYVAAA---------LWGVGSA 447 PV L+ G VH + +++F AP+ V Y+ ++ L G+G + Sbjct: 308 NPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLGLGDS 366 Query: 448 LNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV-AIFTVYLGSSLHMKAKLAVLLVTLVA 506 T L ++LG LY + F I+ + Q++ A + + L + +L V+++ Sbjct: 367 CFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFF 424 Query: 507 AAVSYLRMEQKLRRGVA 523 +S+ +E + VA Sbjct: 425 GTISFFTVEWEAAAFVA 441 >gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] Length = 1132 Score = 33.5 bits (75), Expect = 0.57 Identities = 28/112 (25%), Positives = 37/112 (33%) Query: 485 VYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEE 544 V L + HM + LL + R + + P QP P+ + E Sbjct: 164 VRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEP 223 Query: 545 DNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGPEE 596 S+ E + EE AP P P PA G P P A P E Sbjct: 224 VESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAE 275 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.141 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,115,200 Number of Sequences: 37866 Number of extensions: 1292467 Number of successful extensions: 7328 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 40 Number of HSP's that attempted gapping in prelim test: 7139 Number of HSP's gapped (non-prelim): 194 length of query: 597 length of database: 18,247,518 effective HSP length: 108 effective length of query: 489 effective length of database: 14,157,990 effective search space: 6923257110 effective search space used: 6923257110 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.