Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 45580696
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45580696 hematopoietic signal peptide-containing isoform 2
[Homo sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45580696 hematopoietic signal peptide-containing isoform 2 [H... 524 e-149
gi|89886466 hematopoietic signal peptide-containing isoform 1 [H... 453 e-128
gi|4502565 calpain, small subunit 1 [Homo sapiens] 41 0.001
gi|51599151 calpain, small subunit 1 [Homo sapiens] 41 0.001
gi|238859557 regulatory factor X1 [Homo sapiens] 41 0.001
gi|9558733 transformer-2 alpha [Homo sapiens] 39 0.005
gi|33620755 YEATS domain containing 2 [Homo sapiens] 39 0.005
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 39 0.005
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 39 0.006
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens] 38 0.008
gi|119220564 one cut domain, family member 2 [Homo sapiens] 38 0.008
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 37 0.013
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 37 0.013
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 37 0.013
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 37 0.017
gi|12056465 fibrillarin [Homo sapiens] 37 0.017
gi|24432032 zinc finger protein 503 [Homo sapiens] 37 0.017
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ... 37 0.023
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 37 0.023
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 37 0.023
gi|182765442 homeobox A10 isoform a [Homo sapiens] 37 0.023
gi|5032007 purine-rich element binding protein A [Homo sapiens] 37 0.023
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 37 0.023
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 37 0.023
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 37 0.023
gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 37 0.023
gi|109452587 family with sequence similarity 98, member B isofor... 37 0.023
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 37 0.023
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 37 0.023
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 36 0.030
>gi|45580696 hematopoietic signal peptide-containing isoform 2 [Homo
sapiens]
Length = 262
Score = 524 bits (1349), Expect = e-149
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MAAASAGATRLLLLLLMAVAAPSRARGSGCRAGTGARGAGAEGREGEACGTVGLLLEHSF 60
MAAASAGATRLLLLLLMAVAAPSRARGSGCRAGTGARGAGAEGREGEACGTVGLLLEHSF
Sbjct: 1 MAAASAGATRLLLLLLMAVAAPSRARGSGCRAGTGARGAGAEGREGEACGTVGLLLEHSF 60
Query: 61 EIDDSANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRVRIPRRPGALD 120
EIDDSANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRVRIPRRPGALD
Sbjct: 61 EIDDSANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRVRIPRRPGALD 120
Query: 121 GLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL 180
GLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL
Sbjct: 121 GLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL 180
Query: 181 FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMS 240
FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMS
Sbjct: 181 FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMS 240
Query: 241 GAPDTGGQGGGGGGGGGGGSGR 262
GAPDTGGQGGGGGGGGGGGSGR
Sbjct: 241 GAPDTGGQGGGGGGGGGGGSGR 262
>gi|89886466 hematopoietic signal peptide-containing isoform 1 [Homo
sapiens]
Length = 254
Score = 453 bits (1166), Expect = e-128
Identities = 232/245 (94%), Positives = 235/245 (95%), Gaps = 2/245 (0%)
Query: 1 MAAASAGATRLLLLLLMAVAAPSRARGSGCRAGTGARGAGAEGREGEACGTVGLLLEHSF 60
MAAASAGATRLLLLLLMAVAAPSRARGSGCRAGTGARGAGAEGREGEACGTVGLLLEHSF
Sbjct: 1 MAAASAGATRLLLLLLMAVAAPSRARGSGCRAGTGARGAGAEGREGEACGTVGLLLEHSF 60
Query: 61 EIDDSANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRVRIPRRPGALD 120
EIDDSANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRVRIPRRPGALD
Sbjct: 61 EIDDSANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRVRIPRRPGALD 120
Query: 121 GLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL 180
GLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL
Sbjct: 121 GLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL 180
Query: 181 FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYII--PVVLFLM 238
FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYW I+ V+L +
Sbjct: 181 FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWHIILGGAVLLTAL 240
Query: 239 MSGAP 243
AP
Sbjct: 241 RPAAP 245
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 234 VLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
VL ++SGA GG GGGGGGGGGGG G
Sbjct: 28 VLGGLISGAGGGGGGGGGGGGGGGGGGG 55
Score = 34.7 bits (78), Expect = 0.087
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 241 GAPDTGGQGGGGGGGGGGGS 260
G GG GGGGGGGGGGG+
Sbjct: 38 GGGGGGGGGGGGGGGGGGGT 57
Score = 32.3 bits (72), Expect = 0.43
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 241 GAPDTGGQGGGGGGGGGGGSGR 262
G GG GGGGGGGGGG + R
Sbjct: 39 GGGGGGGGGGGGGGGGGGTAMR 60
Score = 32.0 bits (71), Expect = 0.56
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 248 QGGGGGGGGGGGSG 261
+GGGGGGGGGGG G
Sbjct: 9 KGGGGGGGGGGGLG 22
Score = 31.6 bits (70), Expect = 0.73
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGG GGG G
Sbjct: 11 GGGGGGGGGGLGGGLG 26
Score = 30.4 bits (67), Expect = 1.6
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 235 LFLMMSGAPDTGGQGGGGGGGGGG 258
+FL+ S GG GGGGGG GGG
Sbjct: 1 MFLVNSFLKGGGGGGGGGGGLGGG 24
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 247 GQGGGGGGGGGGGSG 261
G GGGGGGGGG G G
Sbjct: 10 GGGGGGGGGGGLGGG 24
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 234 VLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
VL ++SGA GG GGGGGGGGGGG G
Sbjct: 28 VLGGLISGAGGGGGGGGGGGGGGGGGGG 55
Score = 34.7 bits (78), Expect = 0.087
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 241 GAPDTGGQGGGGGGGGGGGS 260
G GG GGGGGGGGGGG+
Sbjct: 38 GGGGGGGGGGGGGGGGGGGT 57
Score = 32.3 bits (72), Expect = 0.43
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 241 GAPDTGGQGGGGGGGGGGGSGR 262
G GG GGGGGGGGGG + R
Sbjct: 39 GGGGGGGGGGGGGGGGGGTAMR 60
Score = 32.0 bits (71), Expect = 0.56
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 248 QGGGGGGGGGGGSG 261
+GGGGGGGGGGG G
Sbjct: 9 KGGGGGGGGGGGLG 22
Score = 31.6 bits (70), Expect = 0.73
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGG GGG G
Sbjct: 11 GGGGGGGGGGLGGGLG 26
Score = 30.4 bits (67), Expect = 1.6
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 235 LFLMMSGAPDTGGQGGGGGGGGGG 258
+FL+ S GG GGGGGG GGG
Sbjct: 1 MFLVNSFLKGGGGGGGGGGGLGGG 24
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 247 GQGGGGGGGGGGGSG 261
G GGGGGGGGG G G
Sbjct: 10 GGGGGGGGGGGLGGG 24
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 40.8 bits (94), Expect = 0.001
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
SG +GG GGGGGGGGGGGSG
Sbjct: 380 SGGGGSGGGGGGGGGGGGGGSG 401
Score = 37.4 bits (85), Expect = 0.013
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
S + GG GGGGGGGGGGG G
Sbjct: 377 SNSSGGGGSGGGGGGGGGGGGG 398
Score = 36.2 bits (82), Expect = 0.030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
+GA ++ G GG GGGGGGGG G
Sbjct: 374 AGASNSSGGGGSGGGGGGGGGG 395
Score = 33.9 bits (76), Expect = 0.15
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 241 GAPDTGGQGGGGGGGGGGGS 260
G GG GGGGGGGGG GS
Sbjct: 383 GGSGGGGGGGGGGGGGGSGS 402
Score = 33.5 bits (75), Expect = 0.19
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 233 VVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
VV +GA + GGGG GGGGGG G
Sbjct: 365 VVASSTSTGAGASNSSGGGGSGGGGGGGG 393
Score = 32.7 bits (73), Expect = 0.33
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G+ GG GGGGGGGG G +G
Sbjct: 384 GSGGGGGGGGGGGGGGSGSTG 404
Score = 32.0 bits (71), Expect = 0.56
Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 240 SGAPDTGGQGGGGGGG---GGGGSG 261
SG GG GGGGGG GGGGSG
Sbjct: 385 SGGGGGGGGGGGGGGSGSTGGGGSG 409
>gi|9558733 transformer-2 alpha [Homo sapiens]
Length = 282
Score = 38.9 bits (89), Expect = 0.005
Identities = 16/26 (61%), Positives = 18/26 (69%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGGSGR 262
+ M +GG GGGGGGGGGGG GR
Sbjct: 207 IYMGRPTHSGGGGGGGGGGGGGGGGR 232
Score = 35.0 bits (79), Expect = 0.066
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 246 GGQGGGGGGGGGGGSGR 262
GG GGGGGGGGGGG R
Sbjct: 217 GGGGGGGGGGGGGGGRR 233
Score = 34.7 bits (78), Expect = 0.087
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 246 GGQGGGGGGGGGGGSGR 262
GG GGGGGGGGGGG R
Sbjct: 218 GGGGGGGGGGGGGGRRR 234
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 38.9 bits (89), Expect = 0.005
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 238 MMSGAPDTGGQGGGGGGGGGGGSG 261
+ SG+ +GG G GGGGGGGGG G
Sbjct: 791 LQSGSAASGGSGAGGGGGGGGGGG 814
Score = 34.7 bits (78), Expect = 0.087
Identities = 14/22 (63%), Positives = 14/22 (63%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
SG GG GGGGGGGG G G
Sbjct: 798 SGGSGAGGGGGGGGGGGSGSGG 819
Score = 32.7 bits (73), Expect = 0.33
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 240 SGAPDTGGQGGGGGGGGGGG 259
SGA GG GGGGG G GGG
Sbjct: 801 SGAGGGGGGGGGGGSGSGGG 820
Score = 32.0 bits (71), Expect = 0.56
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G+ GG GGGGGGG G G G
Sbjct: 800 GSGAGGGGGGGGGGGSGSGGG 820
Score = 31.6 bits (70), Expect = 0.73
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGG G GG G
Sbjct: 806 GGGGGGGGGSGSGGGG 821
Score = 29.6 bits (65), Expect = 2.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG G GGGG GGG G
Sbjct: 808 GGGGGGGSGSGGGGSTGGGGG 828
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 38.9 bits (89), Expect = 0.005
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGGSG 261
++ S A GG GGGGGGGGGGG+G
Sbjct: 21 IVHSDAAGAGGGGGGGGGGGGGGAG 45
Score = 36.2 bits (82), Expect = 0.030
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
+GA GG GGGGGGGG GG G
Sbjct: 27 AGAGGGGGGGGGGGGGGAGGGG 48
Score = 34.7 bits (78), Expect = 0.087
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
+G GG GGGGGG GGGG G
Sbjct: 29 AGGGGGGGGGGGGGGAGGGGGG 50
Score = 28.9 bits (63), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGGSG 261
L+ +G+ G GGGGGGGG G
Sbjct: 15 LLAAGSIVHSDAAGAGGGGGGGGGG 39
Score = 28.5 bits (62), Expect = 6.2
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
Query: 238 MMSGAPDTGGQGGGGGGGGGG 258
M+S P G GGGGGG GGG
Sbjct: 233 MLSAPP---GPGGGGGGAGGG 250
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 38.5 bits (88), Expect = 0.006
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 211 QKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
+ A++ + FF + + + +VL + G GG GGGGGGGGGGG G
Sbjct: 3478 EAARSHLKSLCFFGQSVVNLQEMVLHVPTGGGG--GGSGGGGGGGGGGGGG 3526
>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
Length = 391
Score = 38.1 bits (87), Expect = 0.008
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 239 MSGAPDTGGQGGGGGGGGGGGSGR 262
+SG GG GGGGGGGGGGG +
Sbjct: 22 LSGPAGAGGGGGGGGGGGGGGGAK 45
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 38.1 bits (87), Expect = 0.008
Identities = 15/19 (78%), Positives = 15/19 (78%)
Query: 243 PDTGGQGGGGGGGGGGGSG 261
P GG GGGGGGGGGGG G
Sbjct: 35 PAGGGSGGGGGGGGGGGGG 53
Score = 36.2 bits (82), Expect = 0.030
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 245 TGGQGGGGGGGGGGGSG 261
+GG GGGGGGGGGGG G
Sbjct: 40 SGGGGGGGGGGGGGGPG 56
Score = 34.7 bits (78), Expect = 0.087
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 239 MSGAPDTGGQGGGGGGGGGGGSG 261
+ G G GGGGGGGGGGG G
Sbjct: 32 LHGPAGGGSGGGGGGGGGGGGGG 54
Score = 31.6 bits (70), Expect = 0.73
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 241 GAPDTGGQGGGGGGGGGGG 259
G GG GGGGGGGGG G
Sbjct: 38 GGSGGGGGGGGGGGGGGPG 56
Score = 30.0 bits (66), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGGSG 261
L M G GGG GGGGGG G
Sbjct: 24 LTMESLGTLHGPAGGGSGGGGGGGG 48
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 37.4 bits (85), Expect = 0.013
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G+ GG GGGGGGGGGGG+G
Sbjct: 410 GSRGGGGGGGGGGGGGGGGAG 430
Score = 35.4 bits (80), Expect = 0.051
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
+ A G +GGGGGGGGGGG G
Sbjct: 404 AAAAALGSRGGGGGGGGGGGGG 425
Score = 34.3 bits (77), Expect = 0.11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGG G+G
Sbjct: 417 GGGGGGGGGGGGAGAG 432
Score = 32.0 bits (71), Expect = 0.56
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGG G G
Sbjct: 413 GGGGGGGGGGGGGGGGAGAGG 433
Score = 32.0 bits (71), Expect = 0.56
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGG G G G
Sbjct: 414 GGGGGGGGGGGGGGGAGAGGG 434
Score = 31.2 bits (69), Expect = 0.96
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 241 GAPDTGGQGGGGGGGGGGGS 260
G GG GGGGG G GGGS
Sbjct: 416 GGGGGGGGGGGGGAGAGGGS 435
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 37.4 bits (85), Expect = 0.013
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 21/62 (33%)
Query: 200 AFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGG 259
A + RLE A++ NP +K D GG GGGGGGGG GG
Sbjct: 203 ALLSRLEQIAAEQKANPDGKKK---------------------GDGGGAGGGGGGGGSGG 241
Query: 260 SG 261
G
Sbjct: 242 GG 243
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 37.4 bits (85), Expect = 0.013
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 21/62 (33%)
Query: 200 AFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGG 259
A + RLE A++ NP +K D GG GGGGGGGG GG
Sbjct: 187 ALLSRLEQIAAEQKANPDGKKK---------------------GDGGGAGGGGGGGGSGG 225
Query: 260 SG 261
G
Sbjct: 226 GG 227
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 37.0 bits (84), Expect = 0.017
Identities = 15/19 (78%), Positives = 15/19 (78%)
Query: 243 PDTGGQGGGGGGGGGGGSG 261
P GG GGGGGGGGGGG G
Sbjct: 449 PCGGGGGGGGGGGGGGGGG 467
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGGGG G
Sbjct: 451 GGGGGGGGGGGGGGGGGGGGG 471
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGGGG G
Sbjct: 452 GGGGGGGGGGGGGGGGGGGGG 472
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGGGG G
Sbjct: 453 GGGGGGGGGGGGGGGGGGGGG 473
Score = 33.9 bits (76), Expect = 0.15
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGGG +G
Sbjct: 456 GGGGGGGGGGGGGGGGGGEAG 476
Score = 32.7 bits (73), Expect = 0.33
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
G GGGGGGGGGGG G
Sbjct: 448 GPCGGGGGGGGGGGGG 463
Score = 29.3 bits (64), Expect = 3.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 241 GAPDTGGQGGGGGGGGGGGS 260
G GG GGGGGGGG G+
Sbjct: 458 GGGGGGGGGGGGGGGGEAGA 477
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 37.0 bits (84), Expect = 0.017
Identities = 14/16 (87%), Positives = 15/16 (93%)
Query: 247 GQGGGGGGGGGGGSGR 262
G+GGGGGGGGGGG GR
Sbjct: 44 GRGGGGGGGGGGGGGR 59
Score = 33.5 bits (75), Expect = 0.19
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 247 GQGGGGGGGGGGGSG 261
G GGGGGGGGGGG G
Sbjct: 46 GGGGGGGGGGGGGRG 60
Score = 33.1 bits (74), Expect = 0.25
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGGG G
Sbjct: 46 GGGGGGGGGGGGGRGG 61
Score = 33.1 bits (74), Expect = 0.25
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGG G G
Sbjct: 47 GGGGGGGGGGGGRGGG 62
Score = 33.1 bits (74), Expect = 0.25
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGG GG G
Sbjct: 48 GGGGGGGGGGGRGGGG 63
Score = 32.0 bits (71), Expect = 0.56
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 247 GQGGGGGGGGGGGSG 261
G+G GGGGGGGGG G
Sbjct: 42 GRGRGGGGGGGGGGG 56
Score = 30.8 bits (68), Expect = 1.3
Identities = 12/14 (85%), Positives = 12/14 (85%)
Query: 246 GGQGGGGGGGGGGG 259
G GGGGGGGGGGG
Sbjct: 44 GRGGGGGGGGGGGG 57
Score = 30.0 bits (66), Expect = 2.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G D GG+GG GG GGG G G
Sbjct: 17 GFGDRGGRGGRGGFGGGRGRG 37
Score = 28.9 bits (63), Expect = 4.8
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 241 GAPDTGGQGGGGGGGGGG 258
G GG GGGGG GGGG
Sbjct: 46 GGGGGGGGGGGGGRGGGG 63
Score = 28.5 bits (62), Expect = 6.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGG GGGG SG
Sbjct: 47 GGGGGGGGGGGGRGGGGFHSG 67
>gi|24432032 zinc finger protein 503 [Homo sapiens]
Length = 646
Score = 37.0 bits (84), Expect = 0.017
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
S + GG GGGGGGGGGGG G
Sbjct: 183 SDKKEPGGGGGGGGGGGGGGGG 204
Score = 32.0 bits (71), Expect = 0.56
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGGG S
Sbjct: 192 GGGGGGGGGGGGGVS 206
Score = 30.4 bits (67), Expect = 1.6
Identities = 11/12 (91%), Positives = 12/12 (100%)
Query: 249 GGGGGGGGGGGS 260
GGGGGGGGGGG+
Sbjct: 17 GGGGGGGGGGGA 28
Score = 29.6 bits (65), Expect = 2.8
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGG S
Sbjct: 193 GGGGGGGGGGGGVSS 207
Score = 28.1 bits (61), Expect = 8.1
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Query: 239 MSGAPDTGG----QGGGGGGGGGGGSG 261
MS AP + GGGGGGGGG G
Sbjct: 1 MSTAPSLSALRSSKHSGGGGGGGGGGG 27
Score = 28.1 bits (61), Expect = 8.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 243 PDTGGQGGGGGGGGGGGSG 261
P + + GGGGGGGGG G
Sbjct: 181 PGSDKKEPGGGGGGGGGGG 199
>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
sapiens]
Length = 3258
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G D GG GG GGGGGGGG G
Sbjct: 746 GGGDGGGGGGDGGGGGGGGGG 766
Score = 36.2 bits (82), Expect = 0.030
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 239 MSGAPDTGGQGGGGGGGGGGG 259
+SGA D GG+ GGGG GGGGG
Sbjct: 734 VSGAGDGGGEEGGGGDGGGGG 754
Score = 34.3 bits (77), Expect = 0.11
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGG GGGGGGG G
Sbjct: 745 GGGGDGGGGGGDGGGGGGGGG 765
Score = 29.6 bits (65), Expect = 2.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G P G G GGG GGGG G
Sbjct: 730 GGPAVSGAGDGGGEEGGGGDG 750
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/21 (76%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
GAP GG GGGGGGG GGG+G
Sbjct: 444 GAPG-GGNGGGGGGGSGGGAG 463
Score = 32.7 bits (73), Expect = 0.33
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 205 LEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
+ +E +K + ++KS F+ + M+G+ GG GGG GGGGG G
Sbjct: 409 IRIEPPKKVPSADKRKSVFS--------LAELGQMNGSVGGGGGAPGGGNGGGGGGG 457
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GG GGG G GG+G
Sbjct: 448 GGNGGGGGGGSGGGAGSGGAG 468
Score = 28.9 bits (63), Expect = 4.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 240 SGAPDTGGQGGGGGGGGGGGS 260
+G GG GGG G GG GG+
Sbjct: 450 NGGGGGGGSGGGAGSGGAGGT 470
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/21 (76%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
GAP GG GGGGGGG GGG+G
Sbjct: 444 GAPG-GGNGGGGGGGSGGGAG 463
Score = 32.7 bits (73), Expect = 0.33
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 205 LEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
+ +E +K + ++KS F+ + M+G+ GG GGG GGGGG G
Sbjct: 409 IRIEPPKKVPSADKRKSVFS--------LAELGQMNGSVGGGGGAPGGGNGGGGGGG 457
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GG GGG G GG+G
Sbjct: 448 GGNGGGGGGGSGGGAGSGGAG 468
Score = 28.9 bits (63), Expect = 4.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 240 SGAPDTGGQGGGGGGGGGGGS 260
+G GG GGG G GG GG+
Sbjct: 450 NGGGGGGGSGGGAGSGGAGGT 470
>gi|182765442 homeobox A10 isoform a [Homo sapiens]
Length = 410
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGG 259
L+ SG + GG GGG GGGGGGG
Sbjct: 34 LISSGRGEAGGGGGGAGGGGGGG 56
Score = 31.6 bits (70), Expect = 0.73
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 236 FLMMSGAPDTGGQGGGGGGGGGGGSG 261
FL+ S G+ GGGGGG GGG G
Sbjct: 29 FLVDSLISSGRGEAGGGGGGAGGGGG 54
Score = 31.2 bits (69), Expect = 0.96
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 246 GGQGGGGGGGGGGGSG 261
G GGGGGG GGGG G
Sbjct: 40 GEAGGGGGGAGGGGGG 55
>gi|5032007 purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
SG+ GG GGGGGGGG GG G
Sbjct: 26 SGSGSGGGGGGGGGGGGSGGGG 47
Score = 36.2 bits (82), Expect = 0.030
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
SG+ GG GGGGGG GGGG G
Sbjct: 28 SGSGGGGGGGGGGGGSGGGGGG 49
Score = 35.8 bits (81), Expect = 0.039
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G P +G GGGGGGGGGG G
Sbjct: 22 GHPGSGSGSGGGGGGGGGGGG 42
Score = 33.9 bits (76), Expect = 0.15
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 240 SGAPDTGGQGGGGGGGGGGGS 260
SG GG GGGG GGGGGG+
Sbjct: 30 SGGGGGGGGGGGGSGGGGGGA 50
Score = 32.7 bits (73), Expect = 0.33
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G+ G GGGGGGGGGG G
Sbjct: 25 GSGSGSGGGGGGGGGGGGSGG 45
Score = 31.6 bits (70), Expect = 0.73
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGG GGGGGG G
Sbjct: 32 GGGGGGGGGGGSGGGGGGAPG 52
Score = 28.9 bits (63), Expect = 4.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GG GGGGGG G
Sbjct: 33 GGGGGGGGGGSGGGGGGAPGG 53
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSGR 262
SG GG GGGGGGGGG GS R
Sbjct: 168 SGRSSAGGGGGGGGGGGGRGSRR 190
Score = 32.7 bits (73), Expect = 0.33
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G+ + GGGGGGGGGGG G
Sbjct: 167 GSGRSSAGGGGGGGGGGGGRG 187
Score = 30.8 bits (68), Expect = 1.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 241 GAPDTGGQGGGGGGGGGGG 259
G GGGGGGGGGGG
Sbjct: 166 GGSGRSSAGGGGGGGGGGG 184
Score = 29.3 bits (64), Expect = 3.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G + GG G GGGGGG G
Sbjct: 161 GGAERGGSGRSSAGGGGGGGG 181
Score = 29.3 bits (64), Expect = 3.6
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 246 GGQGGGGGGGGGGGSGR 262
GG GGGGGGG G GR
Sbjct: 176 GGGGGGGGGGRGSRRGR 192
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGGGG G
Sbjct: 68 GGGGGGGGGGGGGGGGGGGGG 88
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGGGG G
Sbjct: 70 GGGGGGGGGGGGGGGGGGGDG 90
Score = 34.7 bits (78), Expect = 0.087
Identities = 15/23 (65%), Positives = 15/23 (65%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGG 259
L G GG GGGGGGGGGGG
Sbjct: 65 LSHGGGGGGGGGGGGGGGGGGGG 87
Score = 33.1 bits (74), Expect = 0.25
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 241 GAPDTGGQGGGGGGGGGGGS 260
G GG GGGGGGGGG GS
Sbjct: 72 GGGGGGGGGGGGGGGGGDGS 91
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo
sapiens]
Length = 1343
Score = 36.6 bits (83), Expect = 0.023
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 6/39 (15%)
Query: 223 FAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
F + W PV L +G+ +GG G GGGGG GGGSG
Sbjct: 358 FTEQWY---PVTL---PTGSGGSGGMGSGGGGGSGGGSG 390
Score = 31.6 bits (70), Expect = 0.73
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
SG +GG GG GGG GG G G
Sbjct: 374 SGGMGSGGGGGSGGGSGGKGKG 395
Score = 31.2 bits (69), Expect = 0.96
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 243 PDTGGQGGGGGGGGGGGSG 261
P G GGG GGG GGG G
Sbjct: 1044 PAPSGPGGGSGGGSGGGGG 1062
Score = 30.0 bits (66), Expect = 2.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 246 GGQGGGGGGGGGG 258
GG GGG GGGGGG
Sbjct: 1051 GGSGGGSGGGGGG 1063
Score = 30.0 bits (66), Expect = 2.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 246 GGQGGGGGGGGGG 258
GG GG GGGGGGG
Sbjct: 1116 GGSGGSGGGGGGG 1128
Score = 29.6 bits (65), Expect = 2.8
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 242 APDTGGQGGGGGGGGGGG 259
AP G G GGG GGGGG
Sbjct: 1045 APSGPGGGSGGGSGGGGG 1062
Score = 29.3 bits (64), Expect = 3.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 245 TGGQGGGGGGGGGGGSGR 262
+G GG GGG GGGG G+
Sbjct: 1047 SGPGGGSGGGSGGGGGGQ 1064
Score = 28.9 bits (63), Expect = 4.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Query: 246 GGQGGGGGGGGGGGSG 261
G GG GG GGGGG G
Sbjct: 1113 GSIGGSGGSGGGGGGG 1128
>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
Length = 474
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 238 MMSGAPDTGGQGGGGGGGGGGG 259
M S T G GGGGGGGGGGG
Sbjct: 23 MQSSCSSTSGGGGGGGGGGGGG 44
Score = 35.4 bits (80), Expect = 0.051
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 237 LMMSGAPDTGGQGGGGGGGGGGGSG 261
+ S + +GG GGGGGGGGGG SG
Sbjct: 23 MQSSCSSTSGGGGGGGGGGGGGKSG 47
Score = 33.1 bits (74), Expect = 0.25
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 249 GGGGGGGGGGGSGR 262
GGGGGGGGGGG G+
Sbjct: 32 GGGGGGGGGGGGGK 45
Score = 30.8 bits (68), Expect = 1.3
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGG G
Sbjct: 33 GGGGGGGGGGGGKSGG 48
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/22 (72%), Positives = 16/22 (72%)
Query: 241 GAPDTGGQGGGGGGGGGGGSGR 262
G P GG GGGGGGGGGGG R
Sbjct: 411 GDPYGGGGGGGGGGGGGGGYRR 432
Score = 35.4 bits (80), Expect = 0.051
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G D G GGGGGGGGGGG G
Sbjct: 409 GYGDPYGGGGGGGGGGGGGGG 429
Score = 35.0 bits (79), Expect = 0.066
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 246 GGQGGGGGGGGGGGSGR 262
GG GGGG GGGGGG GR
Sbjct: 340 GGGGGGGRGGGGGGGGR 356
Score = 35.0 bits (79), Expect = 0.066
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 246 GGQGGGGGGGGGGGSGR 262
GG GGGGG GGGGG GR
Sbjct: 368 GGGGGGGGWGGGGGGGR 384
Score = 33.9 bits (76), Expect = 0.15
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGG GG G
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGG 351
Score = 33.9 bits (76), Expect = 0.15
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGG GGGG G
Sbjct: 352 GGGGRGGWGGGGGGWGGGGGG 372
Score = 33.5 bits (75), Expect = 0.19
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG+GGGGGGGG GG G
Sbjct: 340 GGGGGGGRGGGGGGGGRGGWG 360
Score = 33.1 bits (74), Expect = 0.25
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGG GGGGG G
Sbjct: 339 GGGGGGGGRGGGGGGG 354
Score = 33.1 bits (74), Expect = 0.25
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGG GGGGGGG G
Sbjct: 360 GGGGGGWGGGGGGGGG 375
Score = 32.7 bits (73), Expect = 0.33
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGG GGGGGGG G
Sbjct: 370 GGGGGGWGGGGGGGRG 385
Score = 32.0 bits (71), Expect = 0.56
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 246 GGQGGGGGGGGGGGSGR 262
GG G GG GGGGGG GR
Sbjct: 331 GGGGRGGWGGGGGGGGR 347
Score = 32.0 bits (71), Expect = 0.56
Identities = 14/22 (63%), Positives = 14/22 (63%)
Query: 241 GAPDTGGQGGGGGGGGGGGSGR 262
G GG GGGGGGG GG GR
Sbjct: 369 GGGGGGGWGGGGGGGRGGFQGR 390
Score = 31.6 bits (70), Expect = 0.73
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG+GG GGGGGG G G
Sbjct: 349 GGGGGGGRGGWGGGGGGWGGG 369
Score = 31.2 bits (69), Expect = 0.96
Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 5/21 (23%)
Query: 246 GGQG-----GGGGGGGGGGSG 261
GG+G GGGGGGGGGG G
Sbjct: 406 GGRGYGDPYGGGGGGGGGGGG 426
Score = 30.8 bits (68), Expect = 1.3
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGG GG GG G
Sbjct: 343 GGGGRGGGGGGGGRGGWGGGG 363
Score = 30.4 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGG GG GGGG G
Sbjct: 345 GGRGGGGGGGGRGGWGGGGGG 365
Score = 30.4 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G G GGGGGGGG GG G
Sbjct: 360 GGGGGGWGGGGGGGGGWGGGG 380
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 246 GGQGGGGGGGGGGGSG 261
G GGGGGGG GGG G
Sbjct: 337 GWGGGGGGGGRGGGGG 352
Score = 29.6 bits (65), Expect = 2.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G D GG+GG GG GG GG G
Sbjct: 389 GRGDYGGRGGYGGRGGYGGRG 409
Score = 28.1 bits (61), Expect = 8.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 241 GAPDTGGQGGGGGGGGGGG 259
G GG GGGGGGGG G
Sbjct: 339 GGGGGGGGRGGGGGGGGRG 357
Score = 28.1 bits (61), Expect = 8.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 241 GAPDTGGQGGGGGGGGGGG 259
G GG G GGGGGGG G
Sbjct: 367 GGGGGGGGGWGGGGGGGRG 385
Score = 28.1 bits (61), Expect = 8.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 241 GAPDTGGQGGGGGGGGGGG 259
G GG GGGGGGG GG
Sbjct: 368 GGGGGGGGWGGGGGGGRGG 386
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo
sapiens]
Length = 2603
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
S D G GGGGGGGGGGG G
Sbjct: 89 SSDSDNSGGGGGGGGGGGGGGG 110
Score = 34.3 bits (77), Expect = 0.11
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGGGG+
Sbjct: 97 GGGGGGGGGGGGGGT 111
Score = 33.1 bits (74), Expect = 0.25
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 214 KNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
K P +Q+ AK P S + ++GG GGGGGGGGGG G
Sbjct: 64 KKPPQQQHHKAKRNRTCRPPSSSESSSDSDNSGG--GGGGGGGGGGGG 109
Score = 32.3 bits (72), Expect = 0.43
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGGG S
Sbjct: 98 GGGGGGGGGGGGGTS 112
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGG S
Sbjct: 99 GGGGGGGGGGGGTSS 113
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo
sapiens]
Length = 2352
Score = 36.6 bits (83), Expect = 0.023
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
S D G GGGGGGGGGGG G
Sbjct: 89 SSDSDNSGGGGGGGGGGGGGGG 110
Score = 34.3 bits (77), Expect = 0.11
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGGGG+
Sbjct: 97 GGGGGGGGGGGGGGT 111
Score = 33.1 bits (74), Expect = 0.25
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 214 KNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDTGGQGGGGGGGGGGGSG 261
K P +Q+ AK P S + ++GG GGGGGGGGGG G
Sbjct: 64 KKPPQQQHHKAKRNRTCRPPSSSESSSDSDNSGG--GGGGGGGGGGGG 109
Score = 32.3 bits (72), Expect = 0.43
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGGG S
Sbjct: 98 GGGGGGGGGGGGGTS 112
Score = 30.0 bits (66), Expect = 2.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 246 GGQGGGGGGGGGGGS 260
GG GGGGGGGGG S
Sbjct: 99 GGGGGGGGGGGGTSS 113
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 36.2 bits (82), Expect = 0.030
Identities = 14/16 (87%), Positives = 14/16 (87%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGGGG G
Sbjct: 60 GGGGGGGGGGGGGGGG 75
Score = 36.2 bits (82), Expect = 0.030
Identities = 14/16 (87%), Positives = 14/16 (87%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGGGG G
Sbjct: 61 GGGGGGGGGGGGGGGG 76
Score = 36.2 bits (82), Expect = 0.030
Identities = 14/16 (87%), Positives = 14/16 (87%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGGGG G
Sbjct: 62 GGGGGGGGGGGGGGGG 77
Score = 35.4 bits (80), Expect = 0.051
Identities = 14/16 (87%), Positives = 14/16 (87%)
Query: 246 GGQGGGGGGGGGGGSG 261
GG GGGGGGGGGGG G
Sbjct: 64 GGGGGGGGGGGGGGVG 79
Score = 34.7 bits (78), Expect = 0.087
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
S A G GGGGGGGGGGG G
Sbjct: 53 SPAVRAAGGGGGGGGGGGGGGG 74
Score = 33.5 bits (75), Expect = 0.19
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 240 SGAPDTGGQGGGGGGGGGGGSG 261
+G GG GGGGGGGGGG G
Sbjct: 59 AGGGGGGGGGGGGGGGGGGVGG 80
Score = 33.5 bits (75), Expect = 0.19
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGG GGGG+G
Sbjct: 64 GGGGGGGGGGGGGGVGGGGAG 84
Score = 33.1 bits (74), Expect = 0.25
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGGG G G
Sbjct: 61 GGGGGGGGGGGGGGGGGVGGG 81
Score = 33.1 bits (74), Expect = 0.25
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGGGGG GG G
Sbjct: 62 GGGGGGGGGGGGGGGGVGGGG 82
Score = 31.2 bits (69), Expect = 0.96
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GG GGGG GGG+G
Sbjct: 68 GGGGGGGGGGVGGGGAGGGAG 88
Score = 30.8 bits (68), Expect = 1.3
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGGG GGGG G
Sbjct: 65 GGGGGGGGGGGGGVGGGGAGG 85
Score = 30.8 bits (68), Expect = 1.3
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG GGGG GGGG G G
Sbjct: 66 GGGGGGGGGGGGVGGGGAGGG 86
Score = 30.4 bits (67), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Query: 241 GAPDTGGQGGGGGGGGGGGSGR 262
G GG GGGG GGG G GR
Sbjct: 70 GGGGGGGGVGGGGAGGGAGGGR 91
Score = 28.5 bits (62), Expect = 6.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 241 GAPDTGGQGGGGGGGGGGGSG 261
G GG G GGGG GGG G
Sbjct: 69 GGGGGGGGGVGGGGAGGGAGG 89
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,526,894
Number of Sequences: 37866
Number of extensions: 590579
Number of successful extensions: 13458
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7251
Number of HSP's gapped (non-prelim): 3772
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.