Guide to the Human Genome
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Name: C19orf63 Sequence: fasta or formatted (262aa) NCBI GI: 45580696
Description:

hematopoietic signal peptide-containing isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {254aa} hematopoietic signal peptide-containing isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         28           3
 C cysteine            1.5          4           1
 D aspartate           3.8         10           2
 E glutamate           6.9         18           3
 F phenylalanine       3.1          8           2
 G glycine            15.3         40          11
 H histidine           1.9          5           1
 I isoleucine          1.9          5           2
 K lysine              1.9          5           1
 L leucine            11.1         29           6
 M methionine          2.3          6           2
 N asparagine          2.3          6           1
 P proline             4.6         12           2
 Q glutamine           4.6         12           2
 R arginine            7.3         19           2
 S serine              7.3         19           2
 T threonine           4.2         11           2
 V valine              7.3         19           2
 W tryptophan          0.8          2           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hematopoietic signal peptide-containing isoform 2 [H... 
C19orf63              0.858   hematopoietic signal peptide-containing isoform 1 [H...
CAPNS1                0.032   calpain, small subunit 1 
CAPNS1                0.032   calpain, small subunit 1 
RFX1                  0.032   regulatory factor X1 
TRA2A                 0.028   transformer-2 alpha 
YEATS2                0.028   YEATS domain containing 2 
POU3F3                0.028   POU class 3 homeobox 3 
ZFHX3                 0.028   AT-binding transcription factor 1 
SOX1                  0.026   SRY (sex determining region Y)-box 1 
ONECUT2               0.026   one cut domain, family member 2 
EVX2                  0.024   even-skipped homeobox 2 
RALY                  0.024   RNA binding protein (autoantigenic, hnRNP-associated ...
RALY                  0.024   RNA binding protein (autoantigenic, hnRNP-associated...
AR                    0.024   androgen receptor isoform 1 
FBL                   0.024   fibrillarin 
ZNF503                0.024   zinc finger protein 503 
C2orf21               0.024   chromosome 2 open reading frame 21 isoform 1 
SLC4A5                0.024   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.024   sodium bicarbonate transporter 4 isoform c 
HOXA10                0.024   homeobox A10 isoform a 
PURA                  0.024   purine-rich element binding protein A 
LOC100292082          0.024   PREDICTED: hypothetical protein XP_002345881 
POU3F2                0.024   POU domain, class 3, transcription factor 2 
SYNGAP1               0.024   synaptic Ras GTPase activating protein 1 
CCDC6                 0.024   coiled-coil domain containing 6 
FAM98B                0.024   family with sequence similarity 98, member B isofor...
ANKRD17               0.024   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.024   ankyrin repeat domain protein 17 isoform b 
SHOX2                 0.022   short stature homeobox 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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