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Search of human proteins with 13129054
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13129054 zinc finger, FYVE domain containing 21 [Homo
sapiens]
(234 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13129054 zinc finger, FYVE domain containing 21 [Homo sapiens] 486 e-138
gi|121583483 phosphatidylinositol-3-phosphate 5-kinase type III ... 81 7e-16
gi|55741864 zinc finger, FYVE domain containing 28 [Homo sapiens] 80 1e-15
gi|157426866 zinc finger, FYVE domain containing 16 [Homo sapiens] 75 6e-14
gi|157426864 zinc finger, FYVE domain containing 16 [Homo sapiens] 75 6e-14
gi|23510389 myotubularin-related protein 3 isoform b [Homo sapiens] 73 2e-13
gi|10835109 myotubularin-related protein 3 isoform c [Homo sapiens] 72 3e-13
gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Hom... 71 7e-13
gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Hom... 70 2e-12
gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo... 70 2e-12
gi|217272865 myotubularin related protein 4 [Homo sapiens] 68 6e-12
gi|23510387 myotubularin-related protein 3 isoform a [Homo sapiens] 65 5e-11
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens] 64 1e-10
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 61 7e-10
gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo sap... 61 7e-10
gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo sap... 61 7e-10
gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo sap... 61 7e-10
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 61 7e-10
gi|153791377 apoptosis-inducing protein D [Homo sapiens] 61 9e-10
gi|110815813 ankyrin repeat and FYVE domain containing 1 isoform... 60 2e-09
gi|189217917 FYVE, RhoGEF and PH domain containing 2 [Homo sapiens] 60 2e-09
gi|31317270 WD repeat and FYVE domain containing 3 isoform 3 [Ho... 59 3e-09
gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Ho... 59 3e-09
gi|30795182 zinc finger, FYVE domain containing 1 isoform 2 [Hom... 58 6e-09
gi|30795180 zinc finger, FYVE domain containing 1 isoform 1 [Hom... 58 6e-09
gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens] 57 2e-08
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 57 2e-08
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 53 3e-07
gi|13375827 phafin 2 [Homo sapiens] 53 3e-07
gi|198041928 FYVE, RhoGEF and PH domain containing 4 [Homo sapiens] 52 4e-07
>gi|13129054 zinc finger, FYVE domain containing 21 [Homo sapiens]
Length = 234
Score = 486 bits (1252), Expect = e-138
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MSSEVSARRDAKKLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFL 60
MSSEVSARRDAKKLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFL
Sbjct: 1 MSSEVSARRDAKKLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFL 60
Query: 61 TRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECALVSLKEAEFYDKQLKVLLSG 120
TRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECALVSLKEAEFYDKQLKVLLSG
Sbjct: 61 TRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECALVSLKEAEFYDKQLKVLLSG 120
Query: 121 ATFLVTFGNSEKPETMTCRLSNNQRYLFLDGDSHYEIEIVHISTVQILTEGFPPGGGNAR 180
ATFLVTFGNSEKPETMTCRLSNNQRYLFLDGDSHYEIEIVHISTVQILTEGFPPGGGNAR
Sbjct: 121 ATFLVTFGNSEKPETMTCRLSNNQRYLFLDGDSHYEIEIVHISTVQILTEGFPPGGGNAR 180
Query: 181 ATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQAVAWLVAMHKAAKLLYESRDQ 234
ATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQAVAWLVAMHKAAKLLYESRDQ
Sbjct: 181 ATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQAVAWLVAMHKAAKLLYESRDQ 234
>gi|121583483 phosphatidylinositol-3-phosphate 5-kinase type III
isoform 2 [Homo sapiens]
Length = 2098
Score = 81.3 bits (199), Expect = 7e-16
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECA 100
W+PD +C+ C C KF R+HHCR CG+ FC RCC+Q++P + M + +R C C
Sbjct: 155 WMPDSQCKECYDCSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCR 214
Query: 101 LVSLKEAEFYD-----KQLKVLLSGATFLVTFGNSEKPETMTCRLSNNQRYLFLDGDSHY 155
++L A D + L L A + SE + R ++ R +FL+ D +
Sbjct: 215 KIALSYAHSTDSNSIGEDLNALSDSACSVSVLDPSEPRTPVGSRKAS--RNIFLEDDLAW 272
Query: 156 EIEIVH 161
+ ++H
Sbjct: 273 Q-SLIH 277
>gi|55741864 zinc finger, FYVE domain containing 28 [Homo sapiens]
Length = 887
Score = 80.5 bits (197), Expect = 1e-15
Identities = 33/63 (52%), Positives = 37/63 (58%)
Query: 37 EEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQC 96
+ P+WVPD+ C C C A F + RKHHCR CGK FC RC S PL R V PVR C
Sbjct: 810 DPPEWVPDEACGFCTACKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVC 869
Query: 97 AEC 99
C
Sbjct: 870 THC 872
>gi|157426866 zinc finger, FYVE domain containing 16 [Homo sapiens]
Length = 1539
Score = 74.7 bits (182), Expect = 6e-14
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 24 VPEHRAF-GSPFGLEEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKV 82
VPE+ G G ++P WVPD E CM C KF F R+HHCR CGK FC CC++K
Sbjct: 726 VPENTCKEGLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKC 785
Query: 83 PLRRMCFVDPVRQCAECALVSLKEAEFYDKQL 114
L+ + R C C ++ +A+ +++ +
Sbjct: 786 KLQYL--EKEARVCVVC-YETISKAQAFERMM 814
>gi|157426864 zinc finger, FYVE domain containing 16 [Homo sapiens]
Length = 1539
Score = 74.7 bits (182), Expect = 6e-14
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 24 VPEHRAF-GSPFGLEEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKV 82
VPE+ G G ++P WVPD E CM C KF F R+HHCR CGK FC CC++K
Sbjct: 726 VPENTCKEGLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKC 785
Query: 83 PLRRMCFVDPVRQCAECALVSLKEAEFYDKQL 114
L+ + R C C ++ +A+ +++ +
Sbjct: 786 KLQYL--EKEARVCVVC-YETISKAQAFERMM 814
>gi|23510389 myotubularin-related protein 3 isoform b [Homo sapiens]
Length = 1161
Score = 72.8 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 30 FGSPFGLEE-PQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMC 88
F FG E +W+PD C CD+ F +RKHHCR CG FC CC+QKVP+
Sbjct: 1067 FNGDFGDEVMTRWLPDHLAAHCYACDSAFWLASRKHHCRNCGNVFCSSCCNQKVPVPSQQ 1126
Query: 89 FVDPVRQCAEC 99
+P R C C
Sbjct: 1127 LFEPSRVCKSC 1137
>gi|10835109 myotubularin-related protein 3 isoform c [Homo sapiens]
Length = 1198
Score = 72.4 bits (176), Expect = 3e-13
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 37 EEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQC 96
E +W+PD C CD+ F +RKHHCR CG FC CC+QKVP+ +P R C
Sbjct: 1112 EMTRWLPDHLAAHCYACDSAFWLASRKHHCRNCGNVFCSSCCNQKVPVPSQQLFEPSRVC 1171
Query: 97 AEC 99
C
Sbjct: 1172 KSC 1174
>gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Homo
sapiens]
Length = 1366
Score = 71.2 bits (173), Expect = 7e-13
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 39 PQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAE 98
P WVPD + CM+C+A+F F R+HHCR CGK FC CCS K L M + R C
Sbjct: 694 PVWVPDSQAPNCMKCEARFTFTKRRHHCRACGKVFCASCCSLKCKLLYMDRKE-ARVCVI 752
Query: 99 CALVSLKEAE 108
C V + A+
Sbjct: 753 CHSVLMNVAQ 762
>gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Homo
sapiens]
Length = 1425
Score = 70.1 bits (170), Expect = 2e-12
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 39 PQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAE 98
P WVPD + CM+C+A+F F R+HHCR CGK FC CCS K L M + R C
Sbjct: 694 PVWVPDSQAPNCMKCEARFTFTKRRHHCRACGKVFCASCCSLKCKLLYMDRKE-ARVCVI 752
Query: 99 CALVSLKEAEFYDKQL 114
C V L A+ ++ +
Sbjct: 753 CHSV-LMNAQAWENMM 767
>gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo
sapiens]
Length = 762
Score = 69.7 bits (169), Expect = 2e-12
Identities = 27/49 (55%), Positives = 32/49 (65%)
Query: 39 PQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRM 87
P WVPD + CM+C+A+F F R+HHCR CGK FC CCS K L M
Sbjct: 694 PVWVPDSQAPNCMKCEARFTFTKRRHHCRACGKVFCASCCSLKCKLLYM 742
>gi|217272865 myotubularin related protein 4 [Homo sapiens]
Length = 1195
Score = 68.2 bits (165), Expect = 6e-12
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 37 EEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQC 96
E +WVPD C CD +F R+HHCR CG FC CC K+P+ DPV C
Sbjct: 1107 EVTRWVPDHMASHCYNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVC 1166
Query: 97 AEC--ALVSLKEAEFYDKQLKVLLSGAT 122
C + + E +QLK ++ A+
Sbjct: 1167 NSCYEHIQVSRARELMSQQLKKPIATAS 1194
>gi|23510387 myotubularin-related protein 3 isoform a [Homo sapiens]
Length = 1170
Score = 65.1 bits (157), Expect = 5e-11
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 30 FGSPFGLEE-PQWVPDKECRRCMQCDAKFDFLTRKHHCR---------RCGKCFCDRCCS 79
F FG E +W+PD C CD+ F +RKHHCR CG FC CC+
Sbjct: 1067 FNGDFGDEVMTRWLPDHLAAHCYACDSAFWLASRKHHCRDTDRVDQTWNCGNVFCSSCCN 1126
Query: 80 QKVPLRRMCFVDPVRQCAEC 99
QKVP+ +P R C C
Sbjct: 1127 QKVPVPSQQLFEPSRVCKSC 1146
>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
Length = 1430
Score = 63.9 bits (154), Expect = 1e-10
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 26 EHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLR 85
E++ SP G + P W+PD CM C ++F R+HHCR CGK C C S K L
Sbjct: 1204 ENKEEVSPLGSKAPIWIPDTRATMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKYGLD 1263
Query: 86 RMCFVDPVRQCAEC 99
+ P R C C
Sbjct: 1264 YL-KNQPARVCEHC 1276
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 61.2 bits (147), Expect = 7e-10
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 25 PEHRAFGSPFGLEE-PQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVP 83
PE + + F E P WV +EC RC +F +TRKHHCR CG+ FC +C S+
Sbjct: 143 PEFKESDAMFAAERAPDWVDAEECHRCR---VQFGVMTRKHHCRACGQIFCGKCSSKYST 199
Query: 84 LRRMCFVDPVRQCAEC 99
+ + VR C C
Sbjct: 200 IPKFGIEKEVRVCEPC 215
>gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 61.2 bits (147), Expect = 7e-10
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECA 100
W+ D E C QC+ +F RKHHCR CG FC+ C S ++ L + PVR C C
Sbjct: 531 WLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELAL--PSYPKPVRVCDSCH 588
Query: 101 LVSLK 105
+ L+
Sbjct: 589 TLLLQ 593
>gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 61.2 bits (147), Expect = 7e-10
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECA 100
W+ D E C QC+ +F RKHHCR CG FC+ C S ++ L + PVR C C
Sbjct: 531 WLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELAL--PSYPKPVRVCDSCH 588
Query: 101 LVSLK 105
+ L+
Sbjct: 589 TLLLQ 593
>gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo
sapiens]
Length = 708
Score = 61.2 bits (147), Expect = 7e-10
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAECA 100
W+ D E C QC+ +F RKHHCR CG FC+ C S ++ L + PVR C C
Sbjct: 639 WLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELAL--PSYPKPVRVCDSCH 696
Query: 101 LVSLK 105
+ L+
Sbjct: 697 TLLLQ 701
>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
sapiens]
Length = 641
Score = 61.2 bits (147), Expect = 7e-10
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAEC 99
W+ DKE C C+ +F RKHHCR CG+ FC+ C ++PL PVR C C
Sbjct: 572 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNELPLPSS--PKPVRVCDSC 628
>gi|153791377 apoptosis-inducing protein D [Homo sapiens]
Length = 279
Score = 60.8 bits (146), Expect = 9e-10
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 28 RAFGSPFGLEEPQ-WVPDKECRRCMQC-DAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLR 85
RA G P E W+PDK CM+C +F LTR+HHCR+CG C C Q+ L
Sbjct: 135 RATGRPPSTEHAAPWIPDKATDICMRCTQTRFSALTRRHHCRKCGFVVCAECSRQRFLLP 194
Query: 86 RMCFVDPVRQCAEC 99
R+ PVR C+ C
Sbjct: 195 RLS-PKPVRVCSLC 207
>gi|110815813 ankyrin repeat and FYVE domain containing 1 isoform 1
[Homo sapiens]
Length = 1170
Score = 60.1 bits (144), Expect = 2e-09
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 37 EEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQC 96
+EP W C +C A+F TRKHHCR CG+ C +C ++++P+ + PVR C
Sbjct: 1101 KEPPWCDGSYC---YECTARFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVC 1157
Query: 97 AEC 99
C
Sbjct: 1158 NIC 1160
>gi|189217917 FYVE, RhoGEF and PH domain containing 2 [Homo sapiens]
Length = 655
Score = 59.7 bits (143), Expect = 2e-09
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 12 KKLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFLT-RKHHCRRCG 70
K + P G + E GL PQWV DK CM+C F+ LT R+HHCR CG
Sbjct: 428 KAAAQGPEG--DIQEQELQSEELGLRAPQWVRDKMVTMCMRCQEPFNALTRRRHHCRACG 485
Query: 71 KCFCDRCCSQKVPLRRMCFVD--PVRQCAEC 99
C RC + L+ + D P R C C
Sbjct: 486 YVVCARCSDYRAELK---YDDNRPNRVCLHC 513
>gi|31317270 WD repeat and FYVE domain containing 3 isoform 3 [Homo
sapiens]
Length = 281
Score = 59.3 bits (142), Expect = 3e-09
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAEC 99
WV D+ C C +F R+HHCR CG+ FC +C + ++R+ PVR C C
Sbjct: 206 WVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLFCQKCSRFQSEIKRLKISSPVRVCQNC 264
>gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 3526
Score = 59.3 bits (142), Expect = 3e-09
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAEC 99
WV D+ C C +F R+HHCR CG+ FC +C + ++R+ PVR C C
Sbjct: 3451 WVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLFCQKCSRFQSEIKRLKISSPVRVCQNC 3509
>gi|30795182 zinc finger, FYVE domain containing 1 isoform 2 [Homo
sapiens]
Length = 362
Score = 58.2 bits (139), Expect = 6e-09
Identities = 24/59 (40%), Positives = 29/59 (49%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAEC 99
WVPD E C C +F KHHCR CG+ FCD C + + + PVR C C
Sbjct: 297 WVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNC 355
Score = 51.2 bits (121), Expect = 7e-07
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPL-RRMCFVDPVRQCAEC 99
W P+ + C +C F KHHCR CG+ FCD C S+ P+ R PVR C C
Sbjct: 180 WRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNC 239
>gi|30795180 zinc finger, FYVE domain containing 1 isoform 1 [Homo
sapiens]
Length = 777
Score = 58.2 bits (139), Expect = 6e-09
Identities = 24/59 (40%), Positives = 29/59 (49%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAEC 99
WVPD E C C +F KHHCR CG+ FCD C + + + PVR C C
Sbjct: 712 WVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNC 770
Score = 51.2 bits (121), Expect = 7e-07
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 41 WVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQKVPL-RRMCFVDPVRQCAEC 99
W P+ + C +C F KHHCR CG+ FCD C S+ P+ R PVR C C
Sbjct: 595 WRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNC 654
>gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]
Length = 2539
Score = 56.6 bits (135), Expect = 2e-08
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 40 QWVPDKECRRCMQCDAK-FDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAE 98
QWVPD+ CM C + F R+HHCRRCG+ C C ++K+ + C +P R C +
Sbjct: 1808 QWVPDETESICMVCCREHFTMFNRRHHCRRCGRLVCSSCSTKKMVVEG-CRENPARVCDQ 1866
Query: 99 C 99
C
Sbjct: 1867 C 1867
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapiens]
Length = 1478
Score = 56.6 bits (135), Expect = 2e-08
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 13 KLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKC 72
+L+R L + F EE +W+ D E C+ C +F ++ R+HHCR CG+
Sbjct: 1143 ELLRDKDALWQKSDALEFQQKLSAEE-RWLGDTEANHCLDCKREFSWMVRRHHCRICGRI 1201
Query: 73 FCDRCCSQKV 82
FC CC+ V
Sbjct: 1202 FCYYCCNNYV 1211
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 52.8 bits (125), Expect = 3e-07
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 40 QWVPDKECRRCMQCDAKFDFLTRKHHCRRCGKCFCDRCCSQK--VPLRRMCFVDPVRQCA 97
+W D E + CM C F R+HHCR+CG FC C ++ P + PVR C
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSK----KPVRVCD 1403
Query: 98 EC 99
C
Sbjct: 1404 AC 1405
>gi|13375827 phafin 2 [Homo sapiens]
Length = 249
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 41 WVPDKECRRCMQCD-AKFDFLTRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCAEC 99
WVPD E CM+C AKF + R+HHCR+CG C CS+K L PVR C C
Sbjct: 149 WVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGP-CSEKRFLLPSQSSKPVRICDFC 207
>gi|198041928 FYVE, RhoGEF and PH domain containing 4 [Homo sapiens]
Length = 766
Score = 52.0 bits (123), Expect = 4e-07
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 35 GLEEPQWVPDKECRRCMQCDAKFDFLT-RKHHCRRCGKCFCDRCCSQKVPL 84
G P+W+ D E CM+C F+ LT R+HHCR CG C +C K L
Sbjct: 550 GKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGYVVCWKCSDYKAQL 600
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,488,637
Number of Sequences: 37866
Number of extensions: 439476
Number of successful extensions: 2947
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 2734
Number of HSP's gapped (non-prelim): 305
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.