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Search of human proteins with 109150431
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109150431 ring finger protein 31 [Homo sapiens]
(1072 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109150431 ring finger protein 31 [Homo sapiens] 2243 0.0
gi|50284696 IBR domain containing 2 [Homo sapiens] 75 4e-13
gi|38045938 ring finger protein 144 [Homo sapiens] 72 3e-12
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 71 6e-12
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 68 5e-11
gi|5453557 ariadne homolog 2 [Homo sapiens] 67 7e-11
gi|150418007 RAN binding protein 2 [Homo sapiens] 64 1e-09
gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding pro... 62 3e-09
gi|35493801 ring finger protein 19 [Homo sapiens] 62 4e-09
gi|35493782 ring finger protein 19 [Homo sapiens] 62 4e-09
gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo... 59 3e-08
gi|5032105 small optic lobes [Homo sapiens] 56 2e-07
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 56 2e-07
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 56 2e-07
gi|22749145 ring finger protein 217 [Homo sapiens] 52 4e-06
gi|110815809 zinc finger, RAN-binding domain containing 1 protei... 49 3e-05
gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens] 47 7e-05
gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens] 47 7e-05
gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens] 47 7e-05
gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens] 47 7e-05
gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens] 47 7e-05
gi|24430146 nucleoporin 153kDa [Homo sapiens] 45 4e-04
gi|169790973 parkin isoform 3 [Homo sapiens] 41 0.007
gi|169790971 parkin isoform 2 [Homo sapiens] 41 0.007
gi|169790969 parkin isoform 1 [Homo sapiens] 41 0.007
gi|46370057 ring finger protein 216 isoform b [Homo sapiens] 40 0.009
gi|46358403 ring finger protein 216 isoform a [Homo sapiens] 40 0.009
gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo sa... 39 0.026
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 38 0.059
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 37 0.076
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 2243 bits (5813), Expect = 0.0
Identities = 1072/1072 (100%), Positives = 1072/1072 (100%)
Query: 1 MPGEEEERAFLVAREELASALRRDSGQAFSLEQLRPLLASSLPLAARYLQLDAARLVRCN 60
MPGEEEERAFLVAREELASALRRDSGQAFSLEQLRPLLASSLPLAARYLQLDAARLVRCN
Sbjct: 1 MPGEEEERAFLVAREELASALRRDSGQAFSLEQLRPLLASSLPLAARYLQLDAARLVRCN 60
Query: 61 AHGEPRNYLNTLSTALNILEKYGRNLLSPQRPRYWRGVKFNNPVFRSTVDAVQGGRDVLR 120
AHGEPRNYLNTLSTALNILEKYGRNLLSPQRPRYWRGVKFNNPVFRSTVDAVQGGRDVLR
Sbjct: 61 AHGEPRNYLNTLSTALNILEKYGRNLLSPQRPRYWRGVKFNNPVFRSTVDAVQGGRDVLR 120
Query: 121 LYGYTEEQPDGLSFPEGQEEPDEHQVATVTLEVLLLRTELSLLLQNTHPRQQALEQLLED 180
LYGYTEEQPDGLSFPEGQEEPDEHQVATVTLEVLLLRTELSLLLQNTHPRQQALEQLLED
Sbjct: 121 LYGYTEEQPDGLSFPEGQEEPDEHQVATVTLEVLLLRTELSLLLQNTHPRQQALEQLLED 180
Query: 181 KVEDDMLQLSEFDPLLREIAPGPLTTPSVPGSTPGPCFLCGSAPGTLHCPSCKQALCPAC 240
KVEDDMLQLSEFDPLLREIAPGPLTTPSVPGSTPGPCFLCGSAPGTLHCPSCKQALCPAC
Sbjct: 181 KVEDDMLQLSEFDPLLREIAPGPLTTPSVPGSTPGPCFLCGSAPGTLHCPSCKQALCPAC 240
Query: 241 DHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQPRPQSTSLLALGDSSLSSPNPASA 300
DHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQPRPQSTSLLALGDSSLSSPNPASA
Sbjct: 241 DHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQPRPQSTSLLALGDSSLSSPNPASA 300
Query: 301 HLPWHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTGGLEPDLARGRWACQSCT 360
HLPWHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTGGLEPDLARGRWACQSCT
Sbjct: 301 HLPWHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTGGLEPDLARGRWACQSCT 360
Query: 361 FENEAAAVLCSICERPRLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTF 420
FENEAAAVLCSICERPRLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTF
Sbjct: 361 FENEAAAVLCSICERPRLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTF 420
Query: 421 CNSSPGWVCVMCNRTSSPIPAQHAPRPYASSLEKGPPKPGPPRRLSAPLPSSCGDPEKQR 480
CNSSPGWVCVMCNRTSSPIPAQHAPRPYASSLEKGPPKPGPPRRLSAPLPSSCGDPEKQR
Sbjct: 421 CNSSPGWVCVMCNRTSSPIPAQHAPRPYASSLEKGPPKPGPPRRLSAPLPSSCGDPEKQR 480
Query: 481 QDKMREEGLQLVSMIREGEAAGACPEEIFSALQYSGTEVPLQWLRSELPYVLEMVAELAG 540
QDKMREEGLQLVSMIREGEAAGACPEEIFSALQYSGTEVPLQWLRSELPYVLEMVAELAG
Sbjct: 481 QDKMREEGLQLVSMIREGEAAGACPEEIFSALQYSGTEVPLQWLRSELPYVLEMVAELAG 540
Query: 541 QQDPGLGAFSCQEARRAWLDRHGNLDEAVEECVRTRRRKVQELQSLGFGPEEGSLQALFQ 600
QQDPGLGAFSCQEARRAWLDRHGNLDEAVEECVRTRRRKVQELQSLGFGPEEGSLQALFQ
Sbjct: 541 QQDPGLGAFSCQEARRAWLDRHGNLDEAVEECVRTRRRKVQELQSLGFGPEEGSLQALFQ 600
Query: 601 HGGDVSRALTELQRQRLEPFRQRLWDSGPEPTPSWDGPDKQSLVRRLLAVYALPSWGRAE 660
HGGDVSRALTELQRQRLEPFRQRLWDSGPEPTPSWDGPDKQSLVRRLLAVYALPSWGRAE
Sbjct: 601 HGGDVSRALTELQRQRLEPFRQRLWDSGPEPTPSWDGPDKQSLVRRLLAVYALPSWGRAE 660
Query: 661 LALSLLQETPRNYELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCECT 720
LALSLLQETPRNYELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCECT
Sbjct: 661 LALSLLQETPRNYELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCECT 720
Query: 721 ICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYAL 780
ICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYAL
Sbjct: 721 ICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYAL 780
Query: 781 FHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRS 840
FHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRS
Sbjct: 781 FHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRS 840
Query: 841 CEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSG 900
CEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSG
Sbjct: 841 CEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSG 900
Query: 901 CYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAG 960
CYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAG
Sbjct: 901 CYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAG 960
Query: 961 ARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATL 1020
ARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATL
Sbjct: 961 ARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATL 1020
Query: 1021 YEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK 1072
YEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK
Sbjct: 1021 YEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK 1072
>gi|50284696 IBR domain containing 2 [Homo sapiens]
Length = 303
Score = 74.7 bits (182), Expect = 4e-13
Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 22/209 (10%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C +C ++M L C+C C C +Q+ +A++E CG P D
Sbjct: 30 CKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIRE---------GCGSPITCPDMVC 80
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWC------AQCSFGFIYEREQ 812
L++ + + ++ + D + L+ + E + DP WC C +
Sbjct: 81 LNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQP 140
Query: 813 LEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCP 872
+ CP CH FC CK W H SC D Q + E++A + CP
Sbjct: 141 VLVECPSCHLKFCSCCKDAW---HAEVSCRDSQ--PIVLPTEHRAL-FGTDAEAPIKQCP 194
Query: 873 KCKFSYALARGGCMHFHCTQCRHQFCSGC 901
C+ Y GC C C+H FC C
Sbjct: 195 VCRV-YIERNEGCAQMMCKNCKHTFCWYC 222
>gi|38045938 ring finger protein 144 [Homo sapiens]
Length = 292
Score = 72.0 bits (175), Expect = 3e-12
Identities = 53/212 (25%), Positives = 79/212 (37%), Gaps = 26/212 (12%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCP--ACGRPDLTDDT 756
C +C P +M + C+C C C +Q+ + +KE T + CP AC + +
Sbjct: 20 CKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQEN 79
Query: 757 QLLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWC------AQCSFGFIYER 810
++ + +Q + L+ + LF DP WC A C + +
Sbjct: 80 EIECMVAAEIMQRYKKLQFEREVLF-----------DPCRTWCPASTCQAVCQLQDVGLQ 128
Query: 811 EQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGID 870
C C FC CK W H G+ C + + P + M + I
Sbjct: 129 TPQPVQCKACRMEFCSTCKASW---HPGQGCPETMPITFL--PGETSAAFKMEEDDAPIK 183
Query: 871 -CPKCKFSYALARGGCMHFHCTQCRHQFCSGC 901
CPKCK Y GC C C+H FC C
Sbjct: 184 RCPKCKV-YIERDEGCAQMMCKNCKHAFCWYC 214
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 70.9 bits (172), Expect = 6e-12
Identities = 69/284 (24%), Positives = 102/284 (35%), Gaps = 51/284 (17%)
Query: 698 ECAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQ 757
EC +C LP R L SC C DC R + + + E + + CP C D +
Sbjct: 118 ECPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRV-PISCPECSERLNPHDIR 176
Query: 758 LLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATC 817
LL +P + + + L DP WC G+ A+C
Sbjct: 177 LL------------LADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGC-ASC 223
Query: 818 PQ-------CHQTFCVRCKRQWEEQHRGRSCE--DFQNWKRMNDPEYQAQGLAMYLQENG 868
P+ C FC CK+ W H ++C+ Q + + GL+ Y QE+G
Sbjct: 224 PKLTCEREGCQTEFCYHCKQIW---HPNQTCDMARQQRAQTLRVRTKHTSGLS-YGQESG 279
Query: 869 ID----CPKCK-FSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLH 923
D CP+C + + G C H C C +FC C LH
Sbjct: 280 PDDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEI--------------SDLH 325
Query: 924 GHHPRDCLFY-LRDWTALRLQKLLQDNNVMFNTEPPAGARAVPG 966
P C F+ + W+ R +K+L + P G + G
Sbjct: 326 YLSPSGCTFWGKKPWS--RKKKILWQLGTLIGA--PVGISLIAG 365
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 67.8 bits (164), Expect = 5e-11
Identities = 68/285 (23%), Positives = 101/285 (35%), Gaps = 52/285 (18%)
Query: 698 ECAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQ 757
EC +C LP R L SC C DC R + + + E + + CP C D +
Sbjct: 118 ECPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRV-PISCPECSERLNPHDIR 176
Query: 758 LLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATC 817
LL +P + + + L DP WC G+ A+C
Sbjct: 177 LL------------LADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGC-ASC 223
Query: 818 PQ-------CHQTFCVRCKRQWEEQHRGRSCE--DFQNWKRMNDPEYQAQGLAMYLQENG 868
P+ C FC CK+ W H ++C+ Q + + GL+ Y QE+G
Sbjct: 224 PKLTCEREGCQTEFCYHCKQIW---HPNQTCDMARQQRAQTLRVRTKHTSGLS-YGQESG 279
Query: 869 -----IDCPKCK-FSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSL 922
CP+C + + G C H C C +FC C L
Sbjct: 280 PADDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEI--------------SDL 325
Query: 923 HGHHPRDCLFY-LRDWTALRLQKLLQDNNVMFNTEPPAGARAVPG 966
H P C F+ + W+ R +K+L + P G + G
Sbjct: 326 HYLSPSGCTFWGKKPWS--RKKKILWQLGTLIGA--PVGISLIAG 366
>gi|5453557 ariadne homolog 2 [Homo sapiens]
Length = 493
Score = 67.4 bits (163), Expect = 7e-11
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 25/208 (12%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
CAVC + + +L +C+ C C+ QH ++ +K+ + C A P T + +
Sbjct: 139 CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFV 197
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWC--AQCSFGF-IYEREQLEA 815
+ +LRE + + L + + C A C + E
Sbjct: 198 FPLLP--NEELREK--------YRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRARRV 247
Query: 816 TCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNW--KRMNDPEYQAQGLAMYLQENGIDCPK 873
C +C++ FC +C++ + H C + W K +D E A Y+ + DCPK
Sbjct: 248 QCNRCNEVFCFKCRQMY---HAPTDCATIRKWLTKCADDSE-----TANYISAHTKDCPK 299
Query: 874 CKFSYALARGGCMHFHCTQCRHQFCSGC 901
C GGC H C++C+H FC C
Sbjct: 300 CNICIE-KNGGCNHMQCSKCKHDFCWMC 326
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 63.5 bits (153), Expect = 1e-09
Identities = 41/180 (22%), Positives = 65/180 (36%), Gaps = 23/180 (12%)
Query: 304 WHCAACAMLNEPWAVLCVACDRPRGCKGLGLG----TEGPQGTGGLEPDL---------- 349
W C+ C + NEP C+AC + G G G L +
Sbjct: 1419 WDCSICLVRNEPTVSRCIACQNTKSANKSGSSFVHQASFKFGQGDLPKPINSDFRSVFST 1478
Query: 350 ARGRWACQSCTFENEAAAVLCSICERPRLAQPPSLVVDSR-----DAGICLQPLQQGDAL 404
G+W C +C +NE ++ C+ C+ PR P+ + + + L+ G
Sbjct: 1479 KEGQWDCSACLVQNEGSSTKCAACQNPRKQSLPATSIPTPASFKFGTSETSKTLKSGFED 1538
Query: 405 LASAQSQVWYCIHCTFCNSSPGWVCVMCNRTSSPIPAQHAPRP----YASSLEKGPPKPG 460
+ + + W C C N + CV C P P+ P P + +S PK G
Sbjct: 1539 MFAKKEGQWDCSSCLVRNEANATRCVACQNPDKPSPSTSVPAPASFKFGTSETSKAPKSG 1598
Score = 60.1 bits (144), Expect = 1e-08
Identities = 56/212 (26%), Positives = 74/212 (34%), Gaps = 25/212 (11%)
Query: 270 SLPASAQPRPQSTSLLALGDSSLSSPNP-------ASAHLPWHCAACAMLNEPWAVLCVA 322
SLPA++ P P S G S S A W C++C + NE A CVA
Sbjct: 1509 SLPATSIPTPAS---FKFGTSETSKTLKSGFEDMFAKKEGQWDCSSCLVRNEANATRCVA 1565
Query: 323 C---DRPRGCKGLGLGTEGPQGTG--------GLEPDLAR--GRWACQSCTFENEAAAVL 369
C D+P + GT G E + G+W C C NEA+A
Sbjct: 1566 CQNPDKPSPSTSVPAPASFKFGTSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATK 1625
Query: 370 CSICERP-RLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTFCNSSPGWV 428
C C+ P + Q S V + P + + + Q W C C N +
Sbjct: 1626 CIACQNPGKQNQTTSAVSTPASSETSKAPKSGFEGMFTKKEGQ-WDCSVCLVRNEASATK 1684
Query: 429 CVMCNRTSSPIPAQHAPRPYASSLEKGPPKPG 460
C+ C A ASS PK G
Sbjct: 1685 CIACQNPGKQNQTTSAVSTPASSETSKAPKSG 1716
Score = 59.3 bits (142), Expect = 2e-08
Identities = 40/163 (24%), Positives = 57/163 (34%), Gaps = 11/163 (6%)
Query: 304 WHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGT-------GGLEPDLAR--GRW 354
W C+ C + NE A C+AC P P + G E + G+W
Sbjct: 1610 WDCSVCLVRNEASATKCIACQNPGKQNQTTSAVSTPASSETSKAPKSGFEGMFTKKEGQW 1669
Query: 355 ACQSCTFENEAAAVLCSICERP-RLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVW 413
C C NEA+A C C+ P + Q S V + P + + + Q W
Sbjct: 1670 DCSVCLVRNEASATKCIACQNPGKQNQTTSAVSTPASSETSKAPKSGFEGMFTKKEGQ-W 1728
Query: 414 YCIHCTFCNSSPGWVCVMCNRTSSPIPAQHAPRPYASSLEKGP 456
C C N + C+ C S P +S + K P
Sbjct: 1729 DCSVCLVRNEASATKCIACQCPSKQNQTTAISTPASSEISKAP 1771
Score = 56.6 bits (135), Expect = 1e-07
Identities = 48/190 (25%), Positives = 68/190 (35%), Gaps = 20/190 (10%)
Query: 280 QSTSLLALGDSSLSSPNPASAHL--------PWHCAACAMLNEPWAVLCVACDRPRGCKG 331
Q+TS ++ SS +S P S W C+ C + NE A C+AC P
Sbjct: 1637 QTTSAVSTPASSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQ 1696
Query: 332 LGLGTEGPQGT-------GGLEPDLAR--GRWACQSCTFENEAAAVLCSICERPRLAQPP 382
P + G E + G+W C C NEA+A C C+ P
Sbjct: 1697 TTSAVSTPASSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQCPSKQNQT 1756
Query: 383 SLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTFCNSSPGWVCVMCNRTSSPIPAQ 442
+ + + I P + + + W C C N S CV C+ S P
Sbjct: 1757 TAISTPASSEISKAPKSGFEGMF--IRKGQWDCSVCCVQNESSSLKCVACD-ASKPTHKP 1813
Query: 443 HAPRPYASSL 452
A P A +L
Sbjct: 1814 IAEAPSAFTL 1823
Score = 47.4 bits (111), Expect = 7e-05
Identities = 39/163 (23%), Positives = 53/163 (32%), Gaps = 19/163 (11%)
Query: 304 WHCAACAMLNEPWAVLCVACD--RPRGCKGLG-----------LGTEGPQGTGGLEPDLA 350
WHC +C++ N A CV+C P + +G E Q L
Sbjct: 1356 WHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAETVFTPKTSPENVQDRFALVTPKK 1415
Query: 351 RGRWACQSCTFENEAAAVLCSICERPRLAQP--PSLVVDSR---DAGICLQPLQQGDALL 405
G W C C NE C C+ + A S V + G +P+ +
Sbjct: 1416 EGHWDCSICLVRNEPTVSRCIACQNTKSANKSGSSFVHQASFKFGQGDLPKPINSDFRSV 1475
Query: 406 ASAQSQVWYCIHCTFCNSSPGWVCVMC-NRTSSPIPAQHAPRP 447
S + W C C N C C N +PA P P
Sbjct: 1476 FSTKEGQWDCSACLVQNEGSSTKCAACQNPRKQSLPATSIPTP 1518
>gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
Length = 557
Score = 62.0 bits (149), Expect = 3e-09
Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 32/257 (12%)
Query: 678 VVEAVRHSQDRAFLRRLLAQE--CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALK 735
V+ + S+ R R AQ+ C +C P++ L C C C+ ++ T +
Sbjct: 163 VINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGL-ECGHKFCMQCWSEYLTTKIM 221
Query: 736 EKHITDMV-CPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDP 794
E+ + + CPA G L DD ++ + ++L+ + +T + +
Sbjct: 222 EEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLK----------YQHLITNSFVECNR 271
Query: 795 KFLWCA--QCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMND 852
WC C + + +C + FC C W H C+ + W + D
Sbjct: 272 LLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENW---HDPVKCKWLKKWIKKCD 328
Query: 853 PEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHC--TQCRHQFCSGCY-------N 903
+ + ++ N +CPKC + GGC H C C+ +FC C +
Sbjct: 329 DDSETSN---WIAANTKECPKCHVTIE-KDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGS 384
Query: 904 AFYAKNKCPEPNCRVKK 920
A+Y N+ E + + +
Sbjct: 385 AWYNCNRYNEDDAKAAR 401
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 61.6 bits (148), Expect = 4e-09
Identities = 67/293 (22%), Positives = 106/293 (36%), Gaps = 67/293 (22%)
Query: 698 ECAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQ 757
EC +C +R + +C C DC RQ+ I + E + ++ CP C D +
Sbjct: 131 ECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCPECTERFNPHDIR 189
Query: 758 LLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATC 817
L+ L + + + Y F + L+ DP WC G+ A+C
Sbjct: 190 LI---------LSDDVLMEKYEEF---MLRRWLVADPDCRWCPAPDCGYAVIAFGC-ASC 236
Query: 818 PQ-------CHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAM-------- 862
P+ C FC CK+ W H ++C+ + + +AQ L +
Sbjct: 237 PKLTCGREGCGTEFCYHCKQIW---HPNQTCDAAR--------QERAQSLRLRTIRSSSI 285
Query: 863 -YLQENGI------DCPKC-KFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEP 914
Y QE+G CP+C + + G C H C C +FC C
Sbjct: 286 SYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEI--------- 336
Query: 915 NCRVKKSLHGHHPRDCLFY-LRDWTALRLQKLLQDNNVMFNTEPPAGARAVPG 966
LH P C F+ + W+ R +K+L + P G + G
Sbjct: 337 -----SDLHYLSPSGCTFWGKKPWS--RKKKILWQLGTLVGA--PVGIALIAG 380
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 61.6 bits (148), Expect = 4e-09
Identities = 67/293 (22%), Positives = 106/293 (36%), Gaps = 67/293 (22%)
Query: 698 ECAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQ 757
EC +C +R + +C C DC RQ+ I + E + ++ CP C D +
Sbjct: 131 ECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCPECTERFNPHDIR 189
Query: 758 LLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATC 817
L+ L + + + Y F + L+ DP WC G+ A+C
Sbjct: 190 LI---------LSDDVLMEKYEEF---MLRRWLVADPDCRWCPAPDCGYAVIAFGC-ASC 236
Query: 818 PQ-------CHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAM-------- 862
P+ C FC CK+ W H ++C+ + + +AQ L +
Sbjct: 237 PKLTCGREGCGTEFCYHCKQIW---HPNQTCDAAR--------QERAQSLRLRTIRSSSI 285
Query: 863 -YLQENGI------DCPKC-KFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEP 914
Y QE+G CP+C + + G C H C C +FC C
Sbjct: 286 SYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEI--------- 336
Query: 915 NCRVKKSLHGHHPRDCLFY-LRDWTALRLQKLLQDNNVMFNTEPPAGARAVPG 966
LH P C F+ + W+ R +K+L + P G + G
Sbjct: 337 -----SDLHYLSPSGCTFWGKKPWS--RKKKILWQLGTLVGA--PVGIALIAG 380
>gi|24307991 p53-associated parkin-like cytoplasmic protein [Homo
sapiens]
Length = 2517
Score = 58.5 bits (140), Expect = 3e-08
Identities = 47/223 (21%), Positives = 78/223 (34%), Gaps = 29/223 (13%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C VC L + C C C+ ++ T +++ + + CP P +
Sbjct: 2070 CPVCVSPLGCDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAFI 2129
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ---CSFGFIYEREQLEA 815
+ S+ P+ + + K L G + WC C +
Sbjct: 2130 RAIVSS----------PEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCGT 2179
Query: 816 TCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEY--------QAQGLAMYLQEN 867
TC +C C C + E H SC W ++D Y Q++ LA + +
Sbjct: 2180 TCSKCGWASCFNCS--FPEAHYPASCGHMSQW--VDDGGYYDGMSVEAQSKHLAKLISKR 2235
Query: 868 GIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNK 910
CP C+ GC+H C +C H FC C ++ +K
Sbjct: 2236 ---CPSCQAPIE-KNEGCLHMTCAKCNHGFCWRCLKSWKPNHK 2274
Score = 35.0 bits (79), Expect = 0.38
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 16/125 (12%)
Query: 799 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHR------------GRSCEDFQN 846
C C L TC +C+ FC RC + W+ H+ R + FQ+
Sbjct: 2236 CPSCQAPIEKNEGCLHMTCAKCNHGFCWRCLKSWKPNHKDYYNCSAMVSKAARQEKRFQD 2295
Query: 847 WKRMNDPEYQAQGLAMYLQE--NGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNA 904
+ +QA+ A+ L+ + I S+ C Q R C +
Sbjct: 2296 YNERCTFHHQAREFAVNLRNRVSAIHEVPPPRSFTFLNDACQGLE--QARKVLAYACVYS 2353
Query: 905 FYAKN 909
FY+++
Sbjct: 2354 FYSQD 2358
>gi|5032105 small optic lobes [Homo sapiens]
Length = 1086
Score = 56.2 bits (134), Expect = 2e-07
Identities = 43/152 (28%), Positives = 56/152 (36%), Gaps = 35/152 (23%)
Query: 352 GRWACQSCTFENEAAAVLCSICERPRLAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQ 411
G W+C CTF N A CSICE PR P L L S + Q
Sbjct: 5 GEWSCVRCTFLNPAGQRQCSICEAPR--HKPDL----------------NHILRLSVEEQ 46
Query: 412 VWYCIHCTFCNSSPGWVCVMCNRTSSPIPAQHAPRPYASSLEKGPP------------KP 459
W C CTF N C +C T P P A P + + PP +
Sbjct: 47 KWPCARCTFRNFLGKEACEVCGFTPEPAPGA-AFLPVLNGVLPKPPAILGEPKGSCQEEA 105
Query: 460 GPPRR----LSAPLPSSCGDPEKQRQDKMREE 487
GP R + P C D +++ +++ EE
Sbjct: 106 GPVRTAGLVATEPARGQCEDKDEEEKEEQEEE 137
Score = 43.1 bits (100), Expect = 0.001
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 35/141 (24%)
Query: 297 PASAHLP----WHCAACAMLNEPWAVLCVAC------------DRPRGCKGLGLGTEGPQ 340
PAS P W CA C + N A C AC + P C G P
Sbjct: 333 PASPSSPDFTTWSCAKCTLRNPTVAPRCSACGCSKLHGFQEHGEPPTHCPDCGADKPSPC 392
Query: 341 GTGGLEPDLAR----------GRWACQSCTFENEAAAVLCSICERPRLAQPPSLVVDSRD 390
G A+ G+WAC +CT N A C+ C P+L LV R
Sbjct: 393 GRSCGRVSSAQKAARVLPERPGQWACPACTLLNALRAKHCAACHTPQL-----LVAQRRG 447
Query: 391 AGICLQPLQQGDALLASAQSQ 411
A PL++ +++ + Q
Sbjct: 448 AA----PLRRRESMHVEQRRQ 464
Score = 38.5 bits (88), Expect = 0.034
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 337 EGPQGTGGLEPDLARGRWACQSCTFENEAAAVLCSICERPRLAQPPSL 384
E + G EP RG WAC CT N A CS+C PR P +
Sbjct: 133 EQEEEEGAAEP---RGGWACPRCTLHNTPVASSCSVCGGPRRLSLPRI 177
Score = 38.1 bits (87), Expect = 0.045
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 9/70 (12%)
Query: 304 WHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTGGLEPDLARGRWACQSCTFEN 363
W C C LN C C+ PR P L + +W C CTF N
Sbjct: 7 WSCVRCTFLNPAGQRQCSICEAPR---------HKPDLNHILRLSVEEQKWPCARCTFRN 57
Query: 364 EAAAVLCSIC 373
C +C
Sbjct: 58 FLGKEACEVC 67
Score = 33.1 bits (74), Expect = 1.4
Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 17/95 (17%)
Query: 354 WACQSCTFENEAAAVLCSICERPRL------AQPPSLVVD---------SRDAGICLQPL 398
W+C CT N A CS C +L +PP+ D R G +
Sbjct: 344 WSCAKCTLRNPTVAPRCSACGCSKLHGFQEHGEPPTHCPDCGADKPSPCGRSCGR-VSSA 402
Query: 399 QQGDALLASAQSQVWYCIHCTFCNSSPGWVCVMCN 433
Q+ +L Q W C CT N+ C C+
Sbjct: 403 QKAARVLPERPGQ-WACPACTLLNALRAKHCAACH 436
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 55.8 bits (133), Expect = 2e-07
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 31/250 (12%)
Query: 660 ELALSLLQETPRNYELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCEC 719
E AL Q+ + + G+ ++ V+ Q R+ + EC VC L L C
Sbjct: 202 EEALRQYQQRKQQQQEGNYLQHVQLDQ-RSLVLNTEPAECPVCYSVLAPGEAVVLRECLH 260
Query: 720 TICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYA 779
T C +C + ++ ++ CP D+T S L+ +++ L P+ Y
Sbjct: 261 TFCRECLQG----TIRNSQEAEVSCP------FIDNTYSCSG-KLLEREIKALLTPEDYQ 309
Query: 780 LFHKKLTEGVLMRDPKFLWCAQCSFG-----FIYEREQLEATCPQCHQTFCVRCKRQWEE 834
F L G+ + + + + C +E + E TCP C C+ CK
Sbjct: 310 RF---LDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCK----A 362
Query: 835 QHRGRSCEDFQN---WKRMND--PEYQAQGLAMYLQE-NGIDCPKCKFSYALARGGCMHF 888
H +C+++Q + ND + L + LQ+ + CP+C+ + GC
Sbjct: 363 IHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQI-VVQKKDGCDWI 421
Query: 889 HCTQCRHQFC 898
CT C + C
Sbjct: 422 RCTVCHTEIC 431
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 55.8 bits (133), Expect = 2e-07
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 31/250 (12%)
Query: 660 ELALSLLQETPRNYELGDVVEAVRHSQDRAFLRRLLAQECAVCGWALPHNRMQALTSCEC 719
E AL Q+ + + G+ ++ V+ Q R+ + EC VC L L C
Sbjct: 244 EEALRQYQQRKQQQQEGNYLQHVQLDQ-RSLVLNTEPAECPVCYSVLAPGEAVVLRECLH 302
Query: 720 TICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDIQLRESLEPDAYA 779
T C +C + ++ ++ CP D+T S L+ +++ L P+ Y
Sbjct: 303 TFCRECLQG----TIRNSQEAEVSCP------FIDNTYSCSG-KLLEREIKALLTPEDYQ 351
Query: 780 LFHKKLTEGVLMRDPKFLWCAQCSFG-----FIYEREQLEATCPQCHQTFCVRCKRQWEE 834
F L G+ + + + + C +E + E TCP C C+ CK
Sbjct: 352 RF---LDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCK----A 404
Query: 835 QHRGRSCEDFQN---WKRMND--PEYQAQGLAMYLQE-NGIDCPKCKFSYALARGGCMHF 888
H +C+++Q + ND + L + LQ+ + CP+C+ + GC
Sbjct: 405 IHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQI-VVQKKDGCDWI 463
Query: 889 HCTQCRHQFC 898
CT C + C
Sbjct: 464 RCTVCHTEIC 473
>gi|22749145 ring finger protein 217 [Homo sapiens]
Length = 275
Score = 51.6 bits (122), Expect = 4e-06
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 817 CPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKF 876
CP C +C +C W H G +C++++ ++ + A + + Q N CPKCK
Sbjct: 83 CPTCQFVWCFKCHSPW---HEGVNCKEYKKGDKLL--RHWASEIE-HGQRNAQKCPKCKI 136
Query: 877 SYALARGGCMHFHCTQCRHQFCSGC 901
G C H C+QC FC C
Sbjct: 137 HIQRTEG-CDHMTCSQCNTNFCYRC 160
>gi|110815809 zinc finger, RAN-binding domain containing 1 protein
[Homo sapiens]
Length = 708
Score = 48.9 bits (115), Expect = 3e-05
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 36/168 (21%)
Query: 302 LPWHCAACAMLNEPWAVLCVACDRPR-------------GCKGLGLGTEGPQGTGGLEPD 348
+ W C C N P A+ C C R G +G + GG P
Sbjct: 6 IKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPL 65
Query: 349 LA-----------------RGRWACQSCTFENEAAAVLCSIC-----ERPRLAQPPSLVV 386
+ +W+C CT+ N A+ C+ C R P S
Sbjct: 66 ICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGS 125
Query: 387 DSRDAGICLQPLQQ-GDALLASAQSQVWYCIHCTFCNSSPGWVCVMCN 433
SR + P ++ D + ++Q W C CT+ N + CV+C+
Sbjct: 126 GSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCD 173
Score = 48.5 bits (114), Expect = 3e-05
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 21/92 (22%)
Query: 304 WHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTG-GLEP--------------- 347
W C C LN P A+ C C R + TE PQ +G G P
Sbjct: 88 WSCHMCTYLNWPRAIRCTQCLSQRRTRS---PTESPQSSGSGSRPVAFSVDPCEEYNDRN 144
Query: 348 --DLARGRWACQSCTFENEAAAVLCSICERPR 377
+ W C CT+EN A A C +C+ PR
Sbjct: 145 KLNTRTQHWTCSVCTYENWAKAKRCVVCDHPR 176
>gi|34577102 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.4 bits (111), Expect = 7e-05
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C++C + C C C + +F I +++ + + CP P +
Sbjct: 220 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG-- 277
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ--CSFGFIYEREQLEAT 816
Q++E +E + +A + + L + L ++C + C + E
Sbjct: 278 ---------QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGI 328
Query: 817 CPQCHQTFCVRCKRQWEEQHRGRSCE-------DFQNW--------KRMNDPEYQAQGLA 861
C C+ FC C+ + H C+ D +N KR+ D Y + +
Sbjct: 329 CSSCNFAFCTLCRLTY---HGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQ 385
Query: 862 M---------YLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKN 909
+L++N CP C GC CT C FC C + N
Sbjct: 386 KALEEMESKEWLEKNSKSCPCCGTPIE-KLDGCNKMTCTGCMQYFCWICMGSLSRAN 441
>gi|34577100 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.4 bits (111), Expect = 7e-05
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C++C + C C C + +F I +++ + + CP P +
Sbjct: 220 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG-- 277
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ--CSFGFIYEREQLEAT 816
Q++E +E + +A + + L + L ++C + C + E
Sbjct: 278 ---------QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGI 328
Query: 817 CPQCHQTFCVRCKRQWEEQHRGRSCE-------DFQNW--------KRMNDPEYQAQGLA 861
C C+ FC C+ + H C+ D +N KR+ D Y + +
Sbjct: 329 CSSCNFAFCTLCRLTY---HGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQ 385
Query: 862 M---------YLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKN 909
+L++N CP C GC CT C FC C + N
Sbjct: 386 KALEEMESKEWLEKNSKSCPCCGTPIE-KLDGCNKMTCTGCMQYFCWICMGSLSRAN 441
>gi|34577098 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.4 bits (111), Expect = 7e-05
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C++C + C C C + +F I +++ + + CP P +
Sbjct: 220 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG-- 277
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ--CSFGFIYEREQLEAT 816
Q++E +E + +A + + L + L ++C + C + E
Sbjct: 278 ---------QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGI 328
Query: 817 CPQCHQTFCVRCKRQWEEQHRGRSCE-------DFQNW--------KRMNDPEYQAQGLA 861
C C+ FC C+ + H C+ D +N KR+ D Y + +
Sbjct: 329 CSSCNFAFCTLCRLTY---HGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQ 385
Query: 862 M---------YLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKN 909
+L++N CP C GC CT C FC C + N
Sbjct: 386 KALEEMESKEWLEKNSKSCPCCGTPIE-KLDGCNKMTCTGCMQYFCWICMGSLSRAN 441
>gi|34577096 ring finger protein 14 isoform 2 [Homo sapiens]
Length = 348
Score = 47.4 bits (111), Expect = 7e-05
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C++C + C C C + +F I +++ + + CP P +
Sbjct: 94 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG-- 151
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ--CSFGFIYEREQLEAT 816
Q++E +E + +A + + L + L ++C + C + E
Sbjct: 152 ---------QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGI 202
Query: 817 CPQCHQTFCVRCKRQWEEQHRGRSCE-------DFQNW--------KRMNDPEYQAQGLA 861
C C+ FC C+ + H C+ D +N KR+ D Y + +
Sbjct: 203 CSSCNFAFCTLCRLTY---HGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQ 259
Query: 862 M---------YLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKN 909
+L++N CP C GC CT C FC C + N
Sbjct: 260 KALEEMESKEWLEKNSKSCPCCGTPIE-KLDGCNKMTCTGCMQYFCWICMGSLSRAN 315
>gi|4757762 ring finger protein 14 isoform 1 [Homo sapiens]
Length = 474
Score = 47.4 bits (111), Expect = 7e-05
Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)
Query: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
C++C + C C C + +F I +++ + + CP P +
Sbjct: 220 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG-- 277
Query: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQ--CSFGFIYEREQLEAT 816
Q++E +E + +A + + L + L ++C + C + E
Sbjct: 278 ---------QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGI 328
Query: 817 CPQCHQTFCVRCKRQWEEQHRGRSCE-------DFQNW--------KRMNDPEYQAQGLA 861
C C+ FC C+ + H C+ D +N KR+ D Y + +
Sbjct: 329 CSSCNFAFCTLCRLTY---HGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQ 385
Query: 862 M---------YLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKN 909
+L++N CP C GC CT C FC C + N
Sbjct: 386 KALEEMESKEWLEKNSKSCPCCGTPIE-KLDGCNKMTCTGCMQYFCWICMGSLSRAN 441
>gi|24430146 nucleoporin 153kDa [Homo sapiens]
Length = 1475
Score = 45.1 bits (105), Expect = 4e-04
Identities = 57/270 (21%), Positives = 88/270 (32%), Gaps = 42/270 (15%)
Query: 226 TLHCPSCKQALCPACDHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPA-SAQPRPQST-- 282
T++ +CK+ C+ F P+ L + SP + + +AQP S
Sbjct: 579 TVNSTNCKKTPPEDCEGPFR--PAEILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVV 636
Query: 283 ----SLLALGDSSLSSPNPASAHLPWHCAACAMLNEPWAVLCVACDR----PRG-CKGLG 333
++ + S + A W C C + N+ C+AC PR K G
Sbjct: 637 YTRPAISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTG 696
Query: 334 LGTEGPQGTGGLEPDLAR---------GRWACQSCTFENEAAAVLCSICERPR------- 377
+ T G L G W C +C +N+ A+ C CE P+
Sbjct: 697 IETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKR 756
Query: 378 -------LAQPPSLVVDSRDAGICLQPLQQGDALLASAQSQVWYCIHCTFCNSSPGWVCV 430
++ S + L GD S W C C N++ CV
Sbjct: 757 ALTLTVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGS--WECSVCCVSNNAEDNKCV 814
Query: 431 MCNRTSSPIPAQHAPRPYASSLEKGPPKPG 460
C S P P +S++ P G
Sbjct: 815 SC---MSEKPGSSVPASSSSTVPVSLPSGG 841
Score = 37.0 bits (84), Expect = 0.100
Identities = 40/164 (24%), Positives = 60/164 (36%), Gaps = 26/164 (15%)
Query: 225 GTLHCPSC------KQALCPACDHLFHGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQPR 278
GT C +C + C AC+ P TL V + ++ AS+
Sbjct: 724 GTWDCDTCLVQNKPEAIKCVACET---PKPGTCVKRALTLTVVSESAE---TMTASSSSC 777
Query: 279 PQSTSLLALGDSSLSSPNPASAHLPWHCAACAMLNEPWAVLCVAC--DRPRGCKGLGLGT 336
+T L GD P + W C+ C + N CV+C ++P +
Sbjct: 778 TVTTGTLGFGDKF---KRPIGS---WECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSS 831
Query: 337 EGPQ-----GTGGLEP-DLARGRWACQSCTFENEAAAVLCSICE 374
P G+ GLE G W C+ C +N+A + C CE
Sbjct: 832 TVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACE 875
>gi|169790973 parkin isoform 3 [Homo sapiens]
Length = 316
Score = 40.8 bits (94), Expect = 0.007
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Query: 802 CSFGFIYEREQLEATCPQ-----CHQTFCVRCKRQWEE-------QHRGRSCEDFQNWKR 849
C G + E +Q + TC C FC CK + E + G + + ++ +R
Sbjct: 188 CGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGECSAVFEASGTTTQAYRVDER 247
Query: 850 MNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHC--TQCRHQFCSGC 901
+ +++ CP+C GGCMH C QCR ++C C
Sbjct: 248 AAEQARWEAASKETIKKTTKPCPRCHVPVE-KNGGCMHMKCPQPQCRLEWCWNC 300
>gi|169790971 parkin isoform 2 [Homo sapiens]
Length = 437
Score = 40.8 bits (94), Expect = 0.007
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Query: 802 CSFGFIYEREQLEATCPQ-----CHQTFCVRCKRQWEE-------QHRGRSCEDFQNWKR 849
C G + E +Q + TC C FC CK + E + G + + ++ +R
Sbjct: 309 CGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGECSAVFEASGTTTQAYRVDER 368
Query: 850 MNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHC--TQCRHQFCSGC 901
+ +++ CP+C GGCMH C QCR ++C C
Sbjct: 369 AAEQARWEAASKETIKKTTKPCPRCHVPVE-KNGGCMHMKCPQPQCRLEWCWNC 421
>gi|169790969 parkin isoform 1 [Homo sapiens]
Length = 465
Score = 40.8 bits (94), Expect = 0.007
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Query: 802 CSFGFIYEREQLEATCPQ-----CHQTFCVRCKRQWEE-------QHRGRSCEDFQNWKR 849
C G + E +Q + TC C FC CK + E + G + + ++ +R
Sbjct: 337 CGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGECSAVFEASGTTTQAYRVDER 396
Query: 850 MNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHC--TQCRHQFCSGC 901
+ +++ CP+C GGCMH C QCR ++C C
Sbjct: 397 AAEQARWEAASKETIKKTTKPCPRCHVPVE-KNGGCMHMKCPQPQCRLEWCWNC 449
>gi|46370057 ring finger protein 216 isoform b [Homo sapiens]
Length = 866
Score = 40.4 bits (93), Expect = 0.009
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 15/149 (10%)
Query: 778 YALFHKKLTEGVLMR-DPKFLWCAQCSFGFIYEREQLEATCPQ--CHQTFCVRCKRQWEE 834
Y + +K E V + + C CSF + + + +CP C + C +C+ W+E
Sbjct: 583 YKYYERKAEEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKE 642
Query: 835 QHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCR 894
H G +CE+ +D +Y+ C KC + + GC C +C
Sbjct: 643 -HNGLTCEEL---AEKDDIKYRTSIEEKMTAARIRKCHKCG-TGLIKSEGCNRMSC-RCG 696
Query: 895 HQFCSGC------YNAFYAKNKCPEPNCR 917
Q C C Y+ F + P C+
Sbjct: 697 AQMCYLCRVSINGYDHFCQHPRSPGAPCQ 725
>gi|46358403 ring finger protein 216 isoform a [Homo sapiens]
Length = 923
Score = 40.4 bits (93), Expect = 0.009
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 15/149 (10%)
Query: 778 YALFHKKLTEGVLMR-DPKFLWCAQCSFGFIYEREQLEATCPQ--CHQTFCVRCKRQWEE 834
Y + +K E V + + C CSF + + + +CP C + C +C+ W+E
Sbjct: 640 YKYYERKAEEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKE 699
Query: 835 QHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCR 894
H G +CE+ +D +Y+ C KC + + GC C +C
Sbjct: 700 -HNGLTCEEL---AEKDDIKYRTSIEEKMTAARIRKCHKCG-TGLIKSEGCNRMSC-RCG 753
Query: 895 HQFCSGC------YNAFYAKNKCPEPNCR 917
Q C C Y+ F + P C+
Sbjct: 754 AQMCYLCRVSINGYDHFCQHPRSPGAPCQ 782
>gi|148596953 ankyrin repeat and IBR domain containing 1 [Homo
sapiens]
Length = 1089
Score = 38.9 bits (89), Expect = 0.026
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 15/89 (16%)
Query: 824 FCVRCKRQWEEQHRGRSCEDFQNWKRM---NDPE--------YQAQGLAMYLQENGIDCP 872
FC C E H C+ ++NW + PE Y+ ++L N C
Sbjct: 464 FCWECLG---EAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCA 520
Query: 873 KCKFSYALARGGCMHFHCTQCRHQFCSGC 901
CK S GC H C +C++ FC C
Sbjct: 521 NCK-SPIQKNEGCNHMQCAKCKYDFCWIC 548
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 37.7 bits (86), Expect = 0.059
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 11/174 (6%)
Query: 221 GSAPGTLHCPSCKQALCPACDHLFHGHPSRAHHLRQTLPGVLQGTHLSPS-LPASA-QPR 278
G G+ HC +C+ ALC + H A H +T+ + PS LP SA P
Sbjct: 3523 GGGGGSYHCLACESALCG--EEALSQHLESALHKHRTITRAARNAKEHPSLLPHSACFPD 3580
Query: 279 PQSTSLLALGDSSLSSPNPASAHLPWHCAACAMLNE-PWAVLCVACDRPRGCKGLGLG-- 335
P + S S SP P SA P + A P V + +P L
Sbjct: 3581 PSTASTSQSAAHSNDSPPPPSAAAPSSASPHASRKSWPQVVSRASAAKPPSFPPLSSSST 3640
Query: 336 -TEGPQGTGGLEPDLARGRWACQSCTFENEAAAVLCSICERPRLAQPPSLVVDS 388
T T G++P + ++ +S T ++ + S E P+ PS DS
Sbjct: 3641 VTSSSCSTSGVQPSMPTDDYSEESDTDLSQKSDGPASPVEGPK---DPSCPKDS 3691
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 37.4 bits (85), Expect = 0.076
Identities = 39/145 (26%), Positives = 51/145 (35%), Gaps = 12/145 (8%)
Query: 421 CNSSPGWVCVMCNRTSSPIPAQHAPRPYASSLEKGPPKPGPPRRLSAPLPSSCGDPEKQR 480
C SP WVC SP Q +P E PP P P L P P +R
Sbjct: 270 CRFSPLWVCPAAAPARSPARQQGSPGVLRVPPEAAPPLPRPRPHLLTRCPPRA--PRLRR 327
Query: 481 QD---KMREEGLQLVSMIREGEAAGACPEEIFSALQYSGTEVPLQWLRSELPYVLEMVAE 537
+ ++R L + G + G P AL S P E P+ L A
Sbjct: 328 LEAGRRLRRTAAPLGPVAGAGSSFGGRPHRPSLALG-SDRRSP------EAPHYLLWAAA 380
Query: 538 LAGQQDPGLGAFSCQEARRAWLDRH 562
+ GQ+ L + R+ DRH
Sbjct: 381 VRGQEAHSLWPLQPRARRQGGSDRH 405
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,565,824
Number of Sequences: 37866
Number of extensions: 2798123
Number of successful extensions: 12587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 12133
Number of HSP's gapped (non-prelim): 503
length of query: 1072
length of database: 18,247,518
effective HSP length: 113
effective length of query: 959
effective length of database: 13,968,660
effective search space: 13395944940
effective search space used: 13395944940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.