MSH2 29980

Name: MSH2	Sequence: fasta or formatted (934aa)		NCBI GI: 4557761
Description: mutS homolog 2		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 69 2 C cysteine 1.4 13 1 D aspartate 5.1 48 2 E glutamate 7.9 74 2 F phenylalanine 5.0 47 2 G glycine 6.1 57 2 H histidine 1.3 12 1 I isoleucine 6.1 57 3 K lysine 7.5 70 2 L leucine 10.0 93 3 M methionine 2.8 26 1 N asparagine 4.9 46 2 P proline 3.0 28 1 Q glutamine 6.3 59 1 R arginine 4.0 37 2 S serine 5.9 55 2 T threonine 5.1 48 3 V valine 7.2 67 2 W tryptophan 0.3 3 1 Y tyrosine 2.7 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mutS homolog 2 MSH3 0.121 mutS homolog 3 MSH6 0.115 mutS homolog 6 MSH4 0.101 mutS homolog 4 MSH5 0.069 mutS homolog 5 isoform c MSH5 0.069 mutS homolog 5 isoform a MSH5 0.069 mutS homolog 5 isoform c MSH5 0.066 mutS homolog 5 isoform b CYTSA 0.008 cytospin A CYTSA 0.008 cytospin A CCDC18 0.008 sarcoma antigen NY-SAR-41 TBC1D5 0.006 TBC1 domain family, member 5 isoform a TBC1D5 0.006 TBC1 domain family, member 5 isoform b TBC1D5 0.006 TBC1 domain family, member 5 isoform b GOLGB1 0.006 golgi autoantigen, golgin subfamily b, macrogolgin ... FYCO1 0.004 FYVE and coiled-coil domain containing 1 MYO18A 0.004 myosin 18A isoform b MYO18A 0.004 myosin 18A isoform a ZNF280C 0.004 zinc finger protein 280C ARID1A 0.004 AT rich interactive domain 1A isoform a ARID1A 0.004 AT rich interactive domain 1A isoform b IFT74 0.004 coiled-coil domain containing 2 isoform a IFT74 0.004 coiled-coil domain containing 2 isoform a IFT74 0.004 coiled-coil domain containing 2 isoform a CCDC147 0.004 coiled-coil domain containing 147 STMN2 0.004 superiorcervical ganglia, neural specific 10 KIF5B 0.004 kinesin family member 5B CEP135 0.004 centrosome protein 4 TJAP1 0.004 tight junction associated protein 1 isoform b [Homo... TJAP1 0.004 tight junction associated protein 1 isoform b [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.