MSH3 34806

Name: MSH3	Sequence: fasta or formatted (1137aa)		NCBI GI: 68303635
Description: mutS homolog 3		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 86 12 C cysteine 1.5 17 2 D aspartate 5.2 59 2 E glutamate 7.2 82 2 F phenylalanine 3.9 44 2 G glycine 4.7 53 2 H histidine 2.8 32 2 I isoleucine 6.5 74 2 K lysine 8.2 93 3 L leucine 9.7 110 3 M methionine 1.8 21 1 N asparagine 3.7 42 2 P proline 3.9 44 2 Q glutamine 4.6 52 2 R arginine 4.7 54 2 S serine 8.5 97 3 T threonine 5.8 66 2 V valine 6.5 74 2 W tryptophan 0.5 6 1 Y tyrosine 2.7 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mutS homolog 3 MSH6 0.120 mutS homolog 6 MSH4 0.100 mutS homolog 4 MSH2 0.099 mutS homolog 2 MSH5 0.071 mutS homolog 5 isoform c MSH5 0.071 mutS homolog 5 isoform a MSH5 0.071 mutS homolog 5 isoform c MSH5 0.068 mutS homolog 5 isoform b CHD5 0.007 chromodomain helicase DNA binding protein 5 TRRAP 0.006 transformation/transcription domain-associated protei... AMOT 0.006 angiomotin isoform 2 AMOT 0.006 angiomotin isoform 1 CHD3 0.006 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.006 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.006 chromodomain helicase DNA binding protein 3 isoform... BTBD2 0.006 BTB (POZ) domain containing 2 CASKIN1 0.006 CASK interacting protein 1 NKX6-1 0.006 NK6 transcription factor related, locus 1 FAM48B1 0.006 hypothetical protein LOC100130302 PACS1 0.006 phosphofurin acidic cluster sorting protein 1 KCTD19 0.006 potassium channel tetramerisation domain containing... SRRM2 0.005 splicing coactivator subunit SRm300 KDM6B 0.005 lysine (K)-specific demethylase 6B RASAL2 0.005 RAS protein activator like 2 isoform 2 RASAL2 0.005 RAS protein activator like 2 isoform 1 MAZ 0.005 MYC-associated zinc finger protein isoform 2 MAZ 0.005 MYC-associated zinc finger protein isoform 1 PAK4 0.005 p21-activated kinase 4 isoform 1 PAK4 0.005 p21-activated kinase 4 isoform 2 PAK4 0.005 p21-activated kinase 4 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.