CD40LG 29893

Name: CD40LG	Sequence: fasta or formatted (261aa)		NCBI GI: 4557433
Description: CD40 ligand		Referenced in: Neutrophils, Eosinophils, and Basophils TNF and Related Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 16 2 C cysteine 1.9 5 1 D aspartate 2.3 6 1 E glutamate 6.9 18 2 F phenylalanine 5.7 15 1 G glycine 6.1 16 2 H histidine 2.3 6 1 I isoleucine 5.7 15 1 K lysine 6.1 16 2 L leucine 10.0 26 2 M methionine 3.1 8 1 N asparagine 5.0 13 2 P proline 3.1 8 1 Q glutamine 6.1 16 2 R arginine 4.2 11 2 S serine 9.6 25 2 T threonine 6.9 18 2 V valine 5.4 14 1 W tryptophan 0.4 1 1 Y tyrosine 3.1 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD40 ligand TNFSF11 0.055 tumor necrosis factor ligand superfamily, member 11 ... TNFSF11 0.055 tumor necrosis factor ligand superfamily, member 11 i... TNFSF10 0.049 tumor necrosis factor (ligand) superfamily, member 10... TNF 0.045 tumor necrosis factor alpha FASLG 0.039 fas ligand LTB 0.034 lymphotoxin-beta isoform a TNFSF15 0.024 tumor necrosis factor (ligand) superfamily, member 1... CD70 0.016 tumor necrosis factor ligand superfamily, member 7 [H... TNFSF14 0.016 tumor necrosis factor ligand superfamily, member 14 ... TNFSF14 0.016 tumor necrosis factor ligand superfamily, member 14 ... TNFSF12 0.012 tumor necrosis factor (ligand) superfamily, member 12... RBL2 0.008 retinoblastoma-like 2 (p130) KIAA0586 0.008 talpid3 protein FLJ44817 0.008 similar to pleckstrin homology domain protein (5V32... TCF20 0.008 transcription factor 20 isoform 2 TCF20 0.008 transcription factor 20 isoform 1 NASP 0.008 nuclear autoantigenic sperm protein isoform 2 NASP 0.008 nuclear autoantigenic sperm protein isoform 1 SMC2 0.006 structural maintenance of chromosomes 2 SMC2 0.006 structural maintenance of chromosomes 2 SMC2 0.006 structural maintenance of chromosomes 2 LTA 0.006 lymphotoxin alpha precursor LTA 0.006 lymphotoxin alpha precursor TEX11 0.006 testis expressed sequence 11 isoform 2 TEX11 0.006 testis expressed sequence 11 isoform 1 ZNF583 0.006 zinc finger protein 583 ZNF583 0.006 zinc finger protein 583 ZNF583 0.006 zinc finger protein 583 ARID4A 0.006 retinoblastoma-binding protein 1 isoform III Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.