Guide to the Human Genome
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Name: TNFSF14 Sequence: fasta or formatted (240aa) NCBI GI: 25952144
Description:

tumor necrosis factor ligand superfamily, member 14 isoform 1 precursor

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [204aa] tumor necrosis factor ligand superfamily, member 14 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         14           2
 C cysteine            1.2          3           1
 D aspartate           2.9          7           1
 E glutamate           5.4         13           2
 F phenylalanine       2.9          7           1
 G glycine            12.1         29           2
 H histidine           2.9          7           1
 I isoleucine          1.7          4           1
 K lysine              1.7          4           1
 L leucine            14.6         35           5
 M methionine          1.7          4           1
 N asparagine          0.8          2           1
 P proline             4.2         10           1
 Q glutamine           4.2         10           2
 R arginine            8.3         20           2
 S serine              8.8         21           3
 T threonine           5.0         12           1
 V valine             10.0         24           3
 W tryptophan          2.5          6           2
 Y tyrosine            3.3          8           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor ligand superfamily, member 14 ... 
TNFSF14               0.803   tumor necrosis factor ligand superfamily, member 14 ...
FASLG                 0.124   fas ligand 
TNFSF15               0.106   tumor necrosis factor (ligand) superfamily, member 1...
TNF                   0.091   tumor necrosis factor alpha 
LTB                   0.076   lymphotoxin-beta isoform a 
TNFSF10               0.069   tumor necrosis factor (ligand) superfamily, member 10...
TNFSF9                0.048   tumor necrosis factor (ligand) superfamily, member 9 ...
TNFSF11               0.048   tumor necrosis factor ligand superfamily, member 11 ...
TNFSF11               0.048   tumor necrosis factor ligand superfamily, member 11 i...
LTA                   0.043   lymphotoxin alpha precursor 
LTA                   0.043   lymphotoxin alpha precursor 
CD40LG                0.017   CD40 ligand 
SRD5A2                0.007   3-oxo-5 alpha-steroid 4-dehydrogenase 2 
PCYT1B                0.007   choline phosphate cytidylyltransferase 1 beta isofo...
PCYT1B                0.007   choline phosphate cytidylyltransferase 1 beta isofor...
D2HGDH                0.007   D-2-hydroxyglutarate dehydrogenase precursor 
LOC100293413          0.007   PREDICTED: hypothetical protein 
TNFSF12               0.007   tumor necrosis factor (ligand) superfamily, member 12...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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