Guide to the Human Genome
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Name: ZNF238 Sequence: fasta or formatted (531aa) NCBI GI: 45439302
Description:

zinc finger protein 238 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [522aa] zinc finger protein 238 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         34           3
 C cysteine            3.8         20           1
 D aspartate           7.5         40           2
 E glutamate           8.1         43           2
 F phenylalanine       3.0         16           1
 G glycine             4.1         22           2
 H histidine           4.1         22           1
 I isoleucine          2.4         13           1
 K lysine              6.2         33           3
 L leucine             9.4         50           3
 M methionine          2.4         13           2
 N asparagine          2.6         14           2
 P proline             4.5         24           1
 Q glutamine           3.6         19           1
 R arginine            4.9         26           2
 S serine             12.1         64           2
 T threonine           4.5         24           2
 V valine              6.8         36           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 238 isoform 1 
ZNF238                0.980   zinc finger protein 238 isoform 2 
ZBTB3                 0.223   zinc finger and BTB domain containing 3 
ZBTB42                0.203   zinc finger and BTB domain containing 42 
ZBTB17                0.136   zinc finger and BTB domain containing 17 
MYNN                  0.131   myoneurin 
ZNF509                0.122   zinc finger protein 509 
ZBTB43                0.096   zinc finger and BTB domain containing 43 
ZBTB43                0.096   zinc finger and BTB domain containing 43 
ZBTB5                 0.087   zinc finger and BTB domain containing 5 
ZNF14                 0.073   zinc finger protein 14 
ZNF236                0.073   zinc finger protein 236 
ZNF670                0.072   zinc finger protein 670 
ZNF250                0.072   zinc finger protein 250 isoform b 
ZNF250                0.072   zinc finger protein 250 isoform a 
ZNF700                0.072   zinc finger protein 700 
ZNF264                0.071   zinc finger protein 264 
ZNF101                0.071   zinc finger protein 101 
ZNF263                0.071   zinc finger protein 263 
HIC2                  0.071   hypermethylated in cancer 2 
ZNF846                0.070   zinc finger protein 846 
ZNF136                0.070   zinc finger protein 136 
ZNF607                0.070   zinc finger protein 607 
ZNF643                0.070   zinc finger protein 643 
ZNF135                0.070   zinc finger protein 135 
ZNF572                0.069   zinc finger protein 572 
ZNF181                0.069   zinc finger protein 181 isoform 2 
ZNF181                0.069   zinc finger protein 181 isoform 1 
ZNF180                0.069   zinc finger protein 180 
ZNF486                0.069   zinc finger protein 486 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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