Guide to the Human Genome
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Name: ZBTB43 Sequence: fasta or formatted (467aa) NCBI GI: 7662100
Description:

zinc finger and BTB domain containing 43

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [467aa] zinc finger and BTB domain containing 43
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         27           2
 C cysteine            2.6         12           1
 D aspartate           4.9         23           1
 E glutamate          10.1         47           3
 F phenylalanine       4.1         19           1
 G glycine             6.4         30           2
 H histidine           5.6         26           2
 I isoleucine          3.4         16           1
 K lysine              5.4         25           2
 L leucine             6.4         30           2
 M methionine          3.2         15           1
 N asparagine          3.6         17           1
 P proline             3.9         18           1
 Q glutamine           5.1         24           2
 R arginine            4.3         20           2
 S serine             10.1         47           4
 T threonine           5.4         25           2
 V valine              6.0         28           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 43 
ZBTB43                1.000   zinc finger and BTB domain containing 43 
ZBTB37                0.190   zinc finger and BTB domain containing 37 isoform a ...
ZBTB22                0.172   zinc finger and BTB domain containing 22 
ZBTB22                0.172   zinc finger and BTB domain containing 22 
ZBTB34                0.161   zinc finger and BTB domain containing 34 
ZBTB6                 0.136   zinc finger and BTB domain containing 6 
ZBTB37                0.123   zinc finger and BTB domain containing 37 isoform b [...
ZNF238                0.108   zinc finger protein 238 isoform 2 
ZNF238                0.108   zinc finger protein 238 isoform 1 
ZBTB9                 0.107   zinc finger and BTB domain containing 9 
ZBTB17                0.104   zinc finger and BTB domain containing 17 
ZBTB26                0.082   zinc finger and BTB domain containing 26 
NACC1                 0.081   transcriptional repressor NAC1 
ZBTB12                0.080   zinc finger and BTB domain containing 12 
NACC2                 0.080   BTB (POZ) domain containing 14A 
ZNF658                0.073   zinc finger protein 658 
ZNF286A               0.072   zinc finger protein 286 
ZNF286A               0.072   zinc finger protein 286 
ZNF461                0.072   gonadotropin inducible transcription repressor 1 [Ho...
ZNF286B               0.070   zinc finger protein 286B 
ZBTB20                0.069   zinc finger and BTB domain containing 20 
ZNF226                0.068   zinc finger protein 226 isoform a 
ZNF226                0.068   zinc finger protein 226 isoform a 
ZNF552                0.067   zinc finger protein 552 
ZNF605                0.067   zinc finger protein 605 
ZSCAN16               0.066   zinc finger and SCAN domain containing 16 
ZNF684                0.066   zinc finger protein 684 
ZNF234                0.066   zinc finger protein 234 
ZNF234                0.066   zinc finger protein 234 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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