Guide to the Human Genome
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Name: ZBTB5 Sequence: fasta or formatted (677aa) NCBI GI: 7662074
Description:

zinc finger and BTB domain containing 5

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         44           2
 C cysteine            2.2         15           2
 D aspartate           4.7         32           2
 E glutamate           6.9         47           2
 F phenylalanine       4.1         28           2
 G glycine             5.6         38           2
 H histidine           3.2         22           1
 I isoleucine          2.8         19           1
 K lysine              4.0         27           2
 L leucine             7.2         49           2
 M methionine          3.7         25           2
 N asparagine          4.7         32           2
 P proline             6.2         42           2
 Q glutamine           5.9         40           2
 R arginine            5.3         36           2
 S serine             13.7         93           3
 T threonine           4.9         33           2
 V valine              6.5         44           3
 W tryptophan          0.1          1           1
 Y tyrosine            1.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 5 
ZBTB3                 0.069   zinc finger and BTB domain containing 3 
ZNF238                0.069   zinc finger protein 238 isoform 2 
ZNF238                0.069   zinc finger protein 238 isoform 1 
ZNF509                0.064   zinc finger protein 509 
ZBTB17                0.059   zinc finger and BTB domain containing 17 
ZBTB42                0.056   zinc finger and BTB domain containing 42 
ZBTB7A                0.052   zinc finger and BTB domain containing 7A 
ZBTB44                0.052   zinc finger and BTB domain containing 44 
ZBTB46                0.050   zinc finger and BTB domain containing 46 
MYNN                  0.047   myoneurin 
ZBTB8B                0.044   zinc finger and BTB domain containing 8B 
ZBTB7C                0.044   zinc finger and BTB domain containing 7C 
ZBTB40                0.044   zinc finger and BTB domain containing 40 
ZBTB40                0.044   zinc finger and BTB domain containing 40 
HIC2                  0.043   hypermethylated in cancer 2 
KLHL32                0.042   kelch-like 32 
BCL6                  0.041   B-cell lymphoma 6 protein isoform 1 
BCL6                  0.041   B-cell lymphoma 6 protein isoform 2 
BCL6                  0.041   B-cell lymphoma 6 protein isoform 1 
ZBTB10                0.041   zinc finger and BTB domain containing 10 isoform b ...
ZBTB10                0.041   zinc finger and BTB domain containing 10 isoform a ...
ZBTB8A                0.041   zinc finger and BTB domain containing 8A 
ZBTB7B                0.040   zinc finger and BTB domain containing 7B 
LOC100293130          0.040   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.040   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.040   PREDICTED: similar to kruppel-related zinc finger p...
KLHL20                0.039   kelch-like 20 
HIC1                  0.039   hypermethylated in cancer 1 isoform 2 
HIC1                  0.039   hypermethylated in cancer 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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