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Search of human proteins with 4507937
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507937 xeroderma pigmentosum, complementation group A [Homo
sapiens]
(273 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507937 xeroderma pigmentosum, complementation group A [Homo ... 556 e-159
gi|57164948 solute carrier family 30 (zinc transporter), member ... 51 1e-06
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 36 0.032
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 36 0.041
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 35 0.092
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 35 0.092
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 35 0.092
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 35 0.092
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 35 0.092
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.16
gi|4757900 calreticulin precursor [Homo sapiens] 34 0.16
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 33 0.20
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 33 0.20
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 33 0.27
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 33 0.27
gi|197209974 coiled-coil and C2 domain containing 2A isoform a [... 33 0.35
gi|197209817 coiled-coil and C2 domain containing 2A isoform b [... 33 0.35
gi|62243640 zinc finger protein 107 [Homo sapiens] 33 0.35
gi|7706775 zinc finger protein 107 [Homo sapiens] 33 0.35
gi|20330805 guanine nucleotide binding protein, alpha transducin... 32 0.46
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 0.59
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 32 0.78
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 32 0.78
gi|221307573 zinc finger protein 275 [Homo sapiens] 31 1.0
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 31 1.0
gi|239747149 PREDICTED: hypothetical protein XP_002343926 isofor... 31 1.0
gi|239747147 PREDICTED: hypothetical protein XP_002343925 isofor... 31 1.0
gi|239747145 PREDICTED: hypothetical protein XP_002343927 isofor... 31 1.0
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 31 1.0
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 31 1.0
>gi|4507937 xeroderma pigmentosum, complementation group A [Homo
sapiens]
Length = 273
Score = 556 bits (1433), Expect = e-159
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MAAADGALPEAAALEQPAELPASVRASIERKRQRALMLRQARLAARPYSATAAAATGGMA 60
MAAADGALPEAAALEQPAELPASVRASIERKRQRALMLRQARLAARPYSATAAAATGGMA
Sbjct: 1 MAAADGALPEAAALEQPAELPASVRASIERKRQRALMLRQARLAARPYSATAAAATGGMA 60
Query: 61 NVKAAPKIIDTGGGFILEEEEEEEQKIGKVVHQPGPVMEFDYVICEECGKEFMDSYLMNH 120
NVKAAPKIIDTGGGFILEEEEEEEQKIGKVVHQPGPVMEFDYVICEECGKEFMDSYLMNH
Sbjct: 61 NVKAAPKIIDTGGGFILEEEEEEEQKIGKVVHQPGPVMEFDYVICEECGKEFMDSYLMNH 120
Query: 121 FDLPTCDNCRDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKL 180
FDLPTCDNCRDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKL
Sbjct: 121 FDLPTCDNCRDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKL 180
Query: 181 YLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETI 240
YLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETI
Sbjct: 181 YLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETI 240
Query: 241 VHQHEYGPEENLEDDMYRKTCTMCGHELTYEKM 273
VHQHEYGPEENLEDDMYRKTCTMCGHELTYEKM
Sbjct: 241 VHQHEYGPEENLEDDMYRKTCTMCGHELTYEKM 273
>gi|57164948 solute carrier family 30 (zinc transporter), member 9
[Homo sapiens]
Length = 568
Score = 50.8 bits (120), Expect = 1e-06
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 135 KHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIVKRSLEVW 194
++ IT A E+ LK DLE+ L+ I +++PH +YL+ + +SLEVW
Sbjct: 127 QNNFITGVRAINEFCLKSSDLEQ----LRKIRRRSPHEDT-ESFTVYLRSDVEAKSLEVW 181
Query: 195 GSQEALEEAKEVRQENREKMKQKKF--DKKVKELR 227
GS EAL K++R+E + +++ F K ++E R
Sbjct: 182 GSPEALAREKKLRKEAEIEYRERLFRNQKILREYR 216
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 36.2 bits (82), Expect = 0.032
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKM-----KQKKFDKKVKELRRAVRSSVWKRET 239
+I ++ +VW +E + E +E RQE EKM K ++ ++K++E +R + E
Sbjct: 578 KIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIRE---QEEK 634
Query: 240 IVHQHEYGPEENLEDDMYRKTCTMCGHELTYEKM 273
I Q E E+ E+ M + MC E EKM
Sbjct: 635 IREQEEMTQEQ--EEKMGEQEEKMCEQE---EKM 663
Score = 35.0 bits (79), Expect = 0.070
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQH 244
+I K+ +VW +E + E +E +E EKM ++ ++K++E + +W+ E +H+
Sbjct: 504 KIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQ--EEKIRE-----QEEMWREEEKMHEQ 556
Query: 245 EYGPEE----NLEDDMYRK 259
E EE ED M+R+
Sbjct: 557 EKIWEEEKRQEQEDKMWRQ 575
Score = 31.2 bits (69), Expect = 1.0
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 180 LYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKF----------DKKVKELRRA 229
++ K + ++ E QE + E +E RQE + +Q+K ++K++E
Sbjct: 386 MWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK 445
Query: 230 VRSS---VWKRETIVHQHEYGPEENL---EDDMYRK 259
+R +W++E +H+ E EE +++M+R+
Sbjct: 446 IREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQ 481
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVR---SSVWKRETIVHQHE 245
++W +E ++E +E QE EK++++ ++K++E +R +W++E + + E
Sbjct: 301 KMWRQEEKIQEWEEKIQEQEEKIREQ--EEKIREQEEKMRRQEEMMWEKEEKMRRQE 355
Score = 29.6 bits (65), Expect = 3.0
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 20/95 (21%)
Query: 179 KLYLKLQIVKRSLEVWGSQEALEEAKEV-----RQENREKM---------------KQKK 218
K++ + + ++ E+W +E + E +++ RQE +KM +Q++
Sbjct: 532 KMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEE 591
Query: 219 FDKKVKELRRAVRSSVWKRETIVHQHEYGPEENLE 253
++ +E R+ +WK+E + + E +E E
Sbjct: 592 KIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEE 626
Score = 29.3 bits (64), Expect = 3.9
Identities = 11/63 (17%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKF--DKKVKELRRAVRSSVWKRETIVH 242
+I ++ ++W +E + E +++R+E + + +++ + ++K+ E + +W+++ +H
Sbjct: 445 KIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHE-----QEEIWRQKEKMH 499
Query: 243 QHE 245
+ E
Sbjct: 500 EQE 502
Score = 28.9 bits (63), Expect = 5.0
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEEN 251
E+W +E + E +E+ ++ + +Q++ +K +E VW++E + + E E
Sbjct: 477 EMWRQEEKIHEQEEIWRQKEKMHEQEEKIRKQEE-------KVWRQEEKIREQEEKIREQ 529
Query: 252 LEDDMYRK 259
E+ M+R+
Sbjct: 530 -EEKMWRQ 536
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 35.8 bits (81), Expect = 0.041
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 183 KLQIVKRSLEVWGSQEALEEAKEVRQENREKM---------KQKKFDKKVKELRRAVRSS 233
K +I ++ ++W +E + E +E+ QE EKM +++K ++ +++RR
Sbjct: 584 KEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQ-EEK 642
Query: 234 VWKRETIVHQHEYGPEENLE 253
+W++E + Q E +E+ E
Sbjct: 643 MWEQEVRLRQQEEKMQEHQE 662
Score = 31.2 bits (69), Expect = 1.0
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 180 LYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKF----------DKKVKELRRA 229
++ K + ++ E QE + E +E RQE + +Q+K ++K++E
Sbjct: 372 MWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK 431
Query: 230 VRSS---VWKRETIVHQHEYGPEENL---EDDMYRK 259
+R +W++E +H+ E EE +++M+R+
Sbjct: 432 IREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQ 467
Score = 31.2 bits (69), Expect = 1.0
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEEN 251
E+W +E + E +E+ ++ + +Q+K K+ VW++E +H E E
Sbjct: 463 EMWRQEEKIREQEEIWRQKEKMHEQEKIRKQ--------EEKVWRQEEKMHDQEEKIREQ 514
Query: 252 LEDDMYRK 259
E+ M+R+
Sbjct: 515 -EEKMWRQ 521
Score = 30.4 bits (67), Expect = 1.7
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 11/77 (14%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVR---SSVWKRETIVHQHE--- 245
++W +E ++E +E QE EK++++ ++K++E +R +W++E + + E
Sbjct: 301 KMWRQEEKIQEWEEKIQEQEEKIREQ--EEKIREQEEKMRRQEEMMWEKEEKMRRQEEMM 358
Query: 246 YGPEE---NLEDDMYRK 259
+ EE LE+ M+ K
Sbjct: 359 WEKEEKMRRLEEMMWEK 375
Score = 30.4 bits (67), Expect = 1.7
Identities = 11/63 (17%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKF--DKKVKELRRAVRSSVWKRETIVH 242
+I ++ ++W +E + E +++R+E + + +++ + ++K++E + +W+++ +H
Sbjct: 431 KIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIRE-----QEEIWRQKEKMH 485
Query: 243 QHE 245
+ E
Sbjct: 486 EQE 488
Score = 30.4 bits (67), Expect = 1.7
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 179 KLYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRE 238
K++ + +I K+ +VW +E + + +E +E EKM ++ ++K++E +R + E
Sbjct: 483 KMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQ--EEKIREQEEKIRE---QEE 537
Query: 239 TIVHQHEYGPEE 250
I Q E E+
Sbjct: 538 KIREQEEMMQEQ 549
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 34.7 bits (78), Expect = 0.092
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 182 LKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK---ELRRAVRSSVWKRE 238
LK + + +LE+ ++ EE ++V +E ++ KQ++ D+K++ E RR +R
Sbjct: 293 LKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRA 352
Query: 239 TIVHQHEYGPEENLEDDMYRKTC-TMCGHELTYEK 272
+ + PE+ L DD C T G L E+
Sbjct: 353 EAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEE 387
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 34.7 bits (78), Expect = 0.092
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 182 LKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK---ELRRAVRSSVWKRE 238
LK + + +LE+ ++ EE ++V +E ++ KQ++ D+K++ E RR +R
Sbjct: 319 LKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRA 378
Query: 239 TIVHQHEYGPEENLEDDMYRKTC-TMCGHELTYEK 272
+ + PE+ L DD C T G L E+
Sbjct: 379 EAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEE 413
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 34.7 bits (78), Expect = 0.092
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 182 LKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK---ELRRAVRSSVWKRE 238
LK + + +LE+ ++ EE ++V +E ++ KQ++ D+K++ E RR +R
Sbjct: 325 LKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRA 384
Query: 239 TIVHQHEYGPEENLEDDMYRKTC-TMCGHELTYEK 272
+ + PE+ L DD C T G L E+
Sbjct: 385 EAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEE 419
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 34.7 bits (78), Expect = 0.092
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 182 LKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK---ELRRAVRSSVWKRE 238
LK + + +LE+ ++ EE ++V +E ++ KQ++ D+K++ E RR +R
Sbjct: 299 LKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRA 358
Query: 239 TIVHQHEYGPEENLEDDMYRKTC-TMCGHELTYEK 272
+ + PE+ L DD C T G L E+
Sbjct: 359 EAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEE 393
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 34.7 bits (78), Expect = 0.092
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 182 LKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK---ELRRAVRSSVWKRE 238
LK + + +LE+ ++ EE ++V +E ++ KQ++ D+K++ E RR +R
Sbjct: 554 LKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRA 613
Query: 239 TIVHQHEYGPEENLEDDMYRKTC-TMCGHELTYEK 272
+ + PE+ L DD C T G L E+
Sbjct: 614 EAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEE 648
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.16
Identities = 20/107 (18%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 145 KQEYLLKDCDLEKREPPLKFIVKKNPHHSQWG-DMKLYLKLQIVKRSLEVWGSQEALEEA 203
+QE L + + + RE K ++ W D +L K + ++ ++W +E ++E
Sbjct: 335 RQEERLWEQEKQMREQEQKM---RDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEE 391
Query: 204 KEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEE 250
+ +R+ ++ ++++ ++ +E + ++W++E Q + PE+
Sbjct: 392 ERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQ 438
Score = 30.0 bits (66), Expect = 2.3
Identities = 25/124 (20%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 130 RDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIVKR 189
R+ ++K + K +QE L++ + E RE +++ Q + K++ + + ++
Sbjct: 272 REQEEKMRRQEKRLREQEKELREQEKELREQKK---LREQEEQMQEQEEKMWEQEEKMRE 328
Query: 190 SLE-VWGSQEALEEAKEVRQENREKMKQK-----KFDKKVKELRRAVR--SSVWKRETIV 241
E +W +E L E ++ +E +KM+ + + D++++E +R +W++E +
Sbjct: 329 QEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKM 388
Query: 242 HQHE 245
+ E
Sbjct: 389 QEEE 392
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/85 (16%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 167 KKNPHHSQWG-DMKLYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKE 225
K WG + K++ + ++ ++ ++W +E + + ++ + E+M ++ + KE
Sbjct: 461 KIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKE 520
Query: 226 LRRAVRSSVWKRETIVHQHEYGPEE 250
R + +W++E + + + E+
Sbjct: 521 ERMREQKKMWQQEEKMREEKKTQEQ 545
Score = 28.9 bits (63), Expect = 5.0
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHE---YGP 248
++W +E ++E +E E EKM +++ + K++E +W++E + + E +
Sbjct: 596 KMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQE----QEEMMWEQEEKMQEQEEKMWEQ 651
Query: 249 EENL---EDDMYRKTCTMCGHELTYEKM 273
EE + E+ M + M G E EKM
Sbjct: 652 EEKMREQEEKMREQEEKMQGQE---EKM 676
Score = 28.1 bits (61), Expect = 8.6
Identities = 29/144 (20%), Positives = 63/144 (43%), Gaps = 29/144 (20%)
Query: 130 RDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFI---VKKNPHHSQWGDMKLYLKLQ- 185
++A+ + KL K E L +L+++ KF+ V+ N + + L+ Q
Sbjct: 188 KNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQE 247
Query: 186 --IVKRSLEVWGSQEAL----------------------EEAKEVRQENREKMKQKKFDK 221
I K+ ++W +E L E+ KE+R++ +E +QKK +
Sbjct: 248 KKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLRE 307
Query: 222 KVKELRRAVRSSVWKRETIVHQHE 245
+ ++++ +W++E + + E
Sbjct: 308 QEEQMQEQ-EEKMWEQEEKMREQE 330
>gi|4757900 calreticulin precursor [Homo sapiens]
Length = 417
Score = 33.9 bits (76), Expect = 0.16
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEEN 251
E WG +A E+ + +Q+ +++K+++ DKK KE A + + + E EE+
Sbjct: 345 ETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEED 404
Query: 252 LEDDM 256
E+D+
Sbjct: 405 EEEDV 409
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 33.5 bits (75), Expect = 0.20
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 183 KLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVH 242
KLQ E+W +E K RQE + + +++K ++ ++R +W++E +H
Sbjct: 277 KLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQ-EEKMWRQEEKMH 335
Query: 243 QHEYGPEENLEDDMYRK 259
+ E E ED M+R+
Sbjct: 336 EQEEKIREQ-EDKMWRQ 351
Score = 33.5 bits (75), Expect = 0.20
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQEN--REKMKQKKFDKKVKELRRAVRSSVWKRETIVH 242
+I ++ E+W +E + E +E RQE R++ K ++ D+K++E +W++E +
Sbjct: 382 KIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIRE----QEEEMWRQEEKIR 437
Query: 243 QHE 245
+ E
Sbjct: 438 ELE 440
Score = 33.1 bits (74), Expect = 0.27
Identities = 33/173 (19%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 81 EEEEQKIGKVVHQPGPVMEFDYVICEECGKEFMDSYLMNHFDLPTCDNCRDADDKHKLIT 140
E+EE++ K+ Q + E D I E+ + + + + + +D ++K + +
Sbjct: 399 EQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIRELE----EMMQDQEEKLREVE 454
Query: 141 KTEAKQEYLLKDCD--LEKREPPLKFIVKKNPHHSQWGDMKLYLKLQ-IVKRSLEVWGSQ 197
+ ++E +++ + ++++E ++ +K W KL + + I ++ ++W +
Sbjct: 455 EKMQEEEEKMQEQEEKIQRQEEKIQEQEEKT-----WRQEKLLKQEEKIWEQEEKMWRQE 509
Query: 198 EALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEE 250
E + E +E QE EKM++++ + +E+R +W++E + + E +E
Sbjct: 510 EKMWEQEEKMQEQEEKMQRQEEKMREQEVR------LWQQEEKMQEQEVRLQE 556
Score = 32.7 bits (73), Expect = 0.35
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 128 NCRDADDKHKLITKTEAKQEYLLKDCD--LEKREPPLKFIVKKNPHHSQWGDMKLYLKLQ 185
N + + K+ + E QE K C+ L+ RE K ++ H Q + +
Sbjct: 289 NLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQ--------EEK 340
Query: 186 IVKRSLEVWGSQEALEEAKEVRQENREKM-----KQKKFDKKVKELRRAVRSSVWKRETI 240
I ++ ++W +E + E +E +E EKM K ++ D+K++E +W++E
Sbjct: 341 IREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQE----QEEEMWRQEEK 396
Query: 241 VHQHEYGPEENLEDDMYRK 259
+ + EE ++ M+R+
Sbjct: 397 IREQ----EEKRQEKMWRQ 411
Score = 32.3 bits (72), Expect = 0.46
Identities = 17/75 (22%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQH 244
+I ++ ++W +E + E E QE E+M ++ ++K++E + +W++E + +
Sbjct: 361 KIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQ--EEKIREQEEKRQEKMWRQEKKMREQ 418
Query: 245 EYGPEENLEDDMYRK 259
+ E E++M+R+
Sbjct: 419 DEKIREQ-EEEMWRQ 432
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 33.5 bits (75), Expect = 0.20
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 183 KLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVH 242
KLQ E+W +E K RQE + + +++K ++ ++R +W++E +H
Sbjct: 277 KLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQ-EEKMWRQEEKMH 335
Query: 243 QHEYGPEENLEDDMYRK 259
+ E E ED M+R+
Sbjct: 336 EQEEKIREQ-EDKMWRQ 351
Score = 33.5 bits (75), Expect = 0.20
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQEN--REKMKQKKFDKKVKELRRAVRSSVWKRETIVH 242
+I ++ E+W +E + E +E RQE R++ K ++ D+K++E +W++E +
Sbjct: 382 KIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIRE----QEEEMWRQEEKIR 437
Query: 243 QHE 245
+ E
Sbjct: 438 ELE 440
Score = 33.1 bits (74), Expect = 0.27
Identities = 33/173 (19%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 81 EEEEQKIGKVVHQPGPVMEFDYVICEECGKEFMDSYLMNHFDLPTCDNCRDADDKHKLIT 140
E+EE++ K+ Q + E D I E+ + + + + + +D ++K + +
Sbjct: 399 EQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIRELE----EMMQDQEEKLREVE 454
Query: 141 KTEAKQEYLLKDCD--LEKREPPLKFIVKKNPHHSQWGDMKLYLKLQ-IVKRSLEVWGSQ 197
+ ++E +++ + ++++E ++ +K W KL + + I ++ ++W +
Sbjct: 455 EKMQEEEEKMQEQEEKIQRQEEKIQEQEEKT-----WRQEKLLKQEEKIWEQEEKMWRQE 509
Query: 198 EALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEE 250
E + E +E QE EKM++++ + +E+R +W++E + + E +E
Sbjct: 510 EKMWEQEEKMQEQEEKMQRQEEKMREQEVR------LWQQEEKMQEQEVRLQE 556
Score = 32.7 bits (73), Expect = 0.35
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 128 NCRDADDKHKLITKTEAKQEYLLKDCD--LEKREPPLKFIVKKNPHHSQWGDMKLYLKLQ 185
N + + K+ + E QE K C+ L+ RE K ++ H Q + +
Sbjct: 289 NLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQ--------EEK 340
Query: 186 IVKRSLEVWGSQEALEEAKEVRQENREKM-----KQKKFDKKVKELRRAVRSSVWKRETI 240
I ++ ++W +E + E +E +E EKM K ++ D+K++E +W++E
Sbjct: 341 IREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQE----QEEEMWRQEEK 396
Query: 241 VHQHEYGPEENLEDDMYRK 259
+ + EE ++ M+R+
Sbjct: 397 IREQ----EEKRQEKMWRQ 411
Score = 32.3 bits (72), Expect = 0.46
Identities = 17/75 (22%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQH 244
+I ++ ++W +E + E E QE E+M ++ ++K++E + +W++E + +
Sbjct: 361 KIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQ--EEKIREQEEKRQEKMWRQEKKMREQ 418
Query: 245 EYGPEENLEDDMYRK 259
+ E E++M+R+
Sbjct: 419 DEKIREQ-EEEMWRQ 432
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 165 IVKKNPHHSQWGDMKLYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK 224
IV++ P + ++ KL R + S++ EE + Q+ REK++++K K K
Sbjct: 266 IVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQK 325
Query: 225 ELRRAVRSSVWKRETIVHQHEYGPEENLEDDMYRK 259
L R WK E + + E+ L + R+
Sbjct: 326 LLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKRE 360
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 165 IVKKNPHHSQWGDMKLYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVK 224
IV++ P + ++ KL R + S++ EE + Q+ REK++++K K K
Sbjct: 512 IVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQK 571
Query: 225 ELRRAVRSSVWKRETIVHQHEYGPEENLEDDMYRK 259
L R WK E + + E+ L + R+
Sbjct: 572 LLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKRE 606
>gi|197209974 coiled-coil and C2 domain containing 2A isoform a
[Homo sapiens]
Length = 1620
Score = 32.7 bits (73), Expect = 0.35
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 141 KTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLY----------LKLQIVKRS 190
K+E +Q +D + EK LK I+K W +MK LKL + K
Sbjct: 485 KSEIRQTRKFRDAEQEKDRTLLKTIIK------VWKEMKSLREFQRFTNTPLKLVLRKEK 538
Query: 191 LEVWGSQEALE-----EAKEVRQENREKMKQKKFDKKV-----KELRRAVRSSVWKRETI 240
+ +EA E E E+ +E+ E+ QK + + K R+ R+ KR+
Sbjct: 539 ADQKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQA 598
Query: 241 VHQH------EYGPEENL 252
+H E PEE+L
Sbjct: 599 AEEHPGDEIAEPYPEEDL 616
>gi|197209817 coiled-coil and C2 domain containing 2A isoform b
[Homo sapiens]
Length = 1512
Score = 32.7 bits (73), Expect = 0.35
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 141 KTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLY----------LKLQIVKRS 190
K+E +Q +D + EK LK I+K W +MK LKL + K
Sbjct: 436 KSEIRQTRKFRDAEQEKDRTLLKTIIK------VWKEMKSLREFQRFTNTPLKLVLRKEK 489
Query: 191 LEVWGSQEALE-----EAKEVRQENREKMKQKKFDKKV-----KELRRAVRSSVWKRETI 240
+ +EA E E E+ +E+ E+ QK + + K R+ R+ KR+
Sbjct: 490 ADQKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQA 549
Query: 241 VHQH------EYGPEENL 252
+H E PEE+L
Sbjct: 550 AEEHPGDEIAEPYPEEDL 567
>gi|62243640 zinc finger protein 107 [Homo sapiens]
Length = 783
Score = 32.7 bits (73), Expect = 0.35
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 46 RPYSATAAAATGGMANVKAAPKIIDTGGGFILEEEEEEEQKIGKVVHQPGPVMEFDYVI- 104
+PY + KII TG E+ + ++ GK +Q + E +
Sbjct: 326 KPYKCEECGKVFNQFSTLTRHKIIHTG------EKPYKCKECGKAFNQSSNLTEHKKIHT 379
Query: 105 ------CEECGKEF-MDSYLMNHFDLPT------CDNCRDADDKHKLITKTE----AKQE 147
CEECGK F S L+NH + + C+ C A ++ +T+ + ++
Sbjct: 380 AEKSYKCEECGKAFNQHSNLINHRKIYSGEKPYKCEECGKAFNRSSTLTRHKKIHTGEKP 439
Query: 148 YLLKDCD 154
Y ++CD
Sbjct: 440 YKCEECD 446
>gi|7706775 zinc finger protein 107 [Homo sapiens]
Length = 783
Score = 32.7 bits (73), Expect = 0.35
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 46 RPYSATAAAATGGMANVKAAPKIIDTGGGFILEEEEEEEQKIGKVVHQPGPVMEFDYVI- 104
+PY + KII TG E+ + ++ GK +Q + E +
Sbjct: 326 KPYKCEECGKVFNQFSTLTRHKIIHTG------EKPYKCKECGKAFNQSSNLTEHKKIHT 379
Query: 105 ------CEECGKEF-MDSYLMNHFDLPT------CDNCRDADDKHKLITKTE----AKQE 147
CEECGK F S L+NH + + C+ C A ++ +T+ + ++
Sbjct: 380 AEKSYKCEECGKAFNQHSNLINHRKIYSGEKPYKCEECGKAFNRSSTLTRHKKIHTGEKP 439
Query: 148 YLLKDCD 154
Y ++CD
Sbjct: 440 YKCEECD 446
>gi|20330805 guanine nucleotide binding protein, alpha transducing
activity polypeptide 2 [Homo sapiens]
Length = 354
Score = 32.3 bits (72), Expect = 0.46
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 199 ALEEAKEV--RQENREKMKQKKFDKKVKELRRAV-------RSSVWKRETIVHQHEYGPE 249
A E KE+ R + EK Q+ DK+ K ++ + +S++ K+ I+HQ Y PE
Sbjct: 5 ASAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSPE 64
Query: 250 ENLE 253
E LE
Sbjct: 65 ECLE 68
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.0 bits (71), Expect = 0.59
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 123 LPTCDNCRDADDKHKLITKTEAKQEYLLKDCDLEK----REPP--LKFIVKKNPHHSQWG 176
L T + RD D KLIT+T+A L + +K RE +++ ++ + W
Sbjct: 771 LGTLEEMRD-DRLAKLITRTQAVCRGFLMRVEFQKMVQRRESIFCIQYNIRSFMNVKHWP 829
Query: 177 DMKLYLKLQIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWK 236
MKL+ K++ + +S E +++ + KE Q+ ++++ K + K KEL + + V +
Sbjct: 830 WMKLFFKIKPLLKSAE---TEKEMATMKEEFQKTKDEL--AKSEAKRKELEEKLVTLVQE 884
Query: 237 RETIVHQHEYGPEENLED 254
+ + Q + ENL D
Sbjct: 885 KNDLQLQVQ-AESENLLD 901
Score = 30.4 bits (67), Expect = 1.7
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 127 DNCRDADDKHKLITKTEAKQEYLLKDCDLE-KREPPLKFIVKKNPHHSQWGDMKLYLKLQ 185
D+ + +DK + KT++K E ++D + ++E L+ +++N + GD+KL
Sbjct: 1009 DDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLE-GDLKL----- 1062
Query: 186 IVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFD 220
+QE++ + + +Q+ E++K+K F+
Sbjct: 1063 ----------AQESILDLENDKQQLDERLKKKDFE 1087
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 31.6 bits (70), Expect = 0.78
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 141 KTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIVKRSLEVWGSQEAL 200
+ AK+ + KD ++EK + K++ +W D R E WG ++
Sbjct: 70 RKRAKERHREKDREIEKDRDRQR---KRDRERQRWRDRD---------RKRERWGDRD-- 115
Query: 201 EEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEENL-EDDMYR 258
E + RQE RE+ + +K +K +E +R + K I + + E + E + YR
Sbjct: 116 RETETERQEERERQRDRKREKD-RERQRQREIGIDKDREIETEKDRDREREMGETERYR 173
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 31.6 bits (70), Expect = 0.78
Identities = 29/149 (19%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 127 DNCRDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQI 186
+ R+ ++K + + +QE ++ + + + R K+ Q + ++ K +
Sbjct: 382 EKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQ--EEMMWEKEEK 439
Query: 187 VKRSLEVWGSQEALEEAKEVRQENREKMKQKKF----------DKKVKELRRAVRSS--- 233
++ E QE + E +E RQE + +Q+K ++K++E +R
Sbjct: 440 IRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEK 499
Query: 234 VWKRETIVHQHEYGPEENL---EDDMYRK 259
+W++E +H+ E EE +++M+R+
Sbjct: 500 MWRQEEKIHEQEKIREEEKRQEQEEMWRQ 528
Score = 31.2 bits (69), Expect = 1.0
Identities = 14/77 (18%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKF--DKKVKELRRAVRSSVWKRETIVH 242
+I ++ ++W +E + E +++R+E + + +++ + ++K++E + +W+++ +H
Sbjct: 492 KIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIRE-----QEEIWRQKEKIH 546
Query: 243 QHEYGPEENLEDDMYRK 259
+ E + E+ M+R+
Sbjct: 547 EQEEKIRKQ-EEKMWRQ 562
Score = 30.0 bits (66), Expect = 2.3
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 192 EVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVR---SSVWKRETIVHQHE 245
++W +E ++E +E QE EK++++ ++K++E +R +W++E + + E
Sbjct: 362 KMWRQEEKIQEWEEKIQEQEEKIREQ--EEKIREQEEKMRRQEEMMWEKEEKMRRQE 416
Score = 29.6 bits (65), Expect = 3.0
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 185 QIVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQH 244
+I K+ ++W +E + + +E +E EK+ ++ ++K++E +R + E I Q
Sbjct: 551 KIRKQEEKMWRQEEKMHDQEEKIREQEEKVWRQ--EEKIREQEEKIRE---QEEKIREQE 605
Query: 245 EYGPEENLEDDMYRKTCTMCGHELTYEKM 273
E E+ E+ M + MC E EKM
Sbjct: 606 EMTQEQ--EEKMGEQEEKMCEQE---EKM 629
>gi|221307573 zinc finger protein 275 [Homo sapiens]
Length = 429
Score = 31.2 bits (69), Expect = 1.0
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 105 CEECGKEF-MDSYLMNHFDLPT------CDNC-RDADDKHKLITKTEAKQEYLLKDCD 154
CEECG+ F ++++L H L T C C RD D+ +L+ +L DCD
Sbjct: 211 CEECGRSFKVNTHLFRHQKLHTSEKPFACKACSRDFLDRQELLKHQRMHTGHLPFDCD 268
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 31.2 bits (69), Expect = 1.0
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 20/101 (19%)
Query: 130 RDADDKHKLITKTEAKQEYLLKDCDLEKREPPLKFIVKKN----PHHSQWGDMKLYLKLQ 185
+D +DK ++ +K LL D + L+ +V+K H +W M
Sbjct: 486 KDREDKRSALSCVISKTARLLSSEDRARLPEELRSLVQKRYELLEHKKRWASMS------ 539
Query: 186 IVKRSLEVWGSQEALEEAKEVRQENREKMKQKKFDKKVKEL 226
++ E K+ R+E ++K+K+K +++ KE+
Sbjct: 540 ----------EEQRKEYLKKKREELKKKLKEKAKERREKEM 570
>gi|239747149 PREDICTED: hypothetical protein XP_002343926 isoform 2
[Homo sapiens]
Length = 738
Score = 31.2 bits (69), Expect = 1.0
Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 85 QKIGKVVHQPGPVMEFDYVICEECGKEF-MDSYLMNHFDLPT------CDNCRDA-DDKH 136
+K+ HQ E YV C ECGK F S+L++H T C C A +K
Sbjct: 498 EKLSLTNHQRIHTGEKPYV-CSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKS 556
Query: 137 KLITKTE---AKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIVKRSLEV 193
L T ++ Y +DC+ SQ + + ++ ++ E
Sbjct: 557 SLATHQRTHTGEKPYECRDCE---------------KAFSQKSQLNTHQRIHTGEKPYEC 601
Query: 194 WGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEENLE 253
++A E E+ + R +K ++ E R+A R K I HQ + E+ E
Sbjct: 602 SLCRKAFFEKSELIRHLRTHTGEKPYE--CNECRKAFRE---KSSLINHQRIHTGEKPFE 656
Query: 254 DDMYRKTCTMCG 265
C+ CG
Sbjct: 657 -------CSECG 661
>gi|239747147 PREDICTED: hypothetical protein XP_002343925 isoform 1
[Homo sapiens]
Length = 738
Score = 31.2 bits (69), Expect = 1.0
Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 85 QKIGKVVHQPGPVMEFDYVICEECGKEF-MDSYLMNHFDLPT------CDNCRDA-DDKH 136
+K+ HQ E YV C ECGK F S+L++H T C C A +K
Sbjct: 498 EKLSLTNHQRIHTGEKPYV-CSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKS 556
Query: 137 KLITKTE---AKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIVKRSLEV 193
L T ++ Y +DC+ SQ + + ++ ++ E
Sbjct: 557 SLATHQRTHTGEKPYECRDCE---------------KAFSQKSQLNTHQRIHTGEKPYEC 601
Query: 194 WGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEENLE 253
++A E E+ + R +K ++ E R+A R K I HQ + E+ E
Sbjct: 602 SLCRKAFFEKSELIRHLRTHTGEKPYE--CNECRKAFRE---KSSLINHQRIHTGEKPFE 656
Query: 254 DDMYRKTCTMCG 265
C+ CG
Sbjct: 657 -------CSECG 661
>gi|239747145 PREDICTED: hypothetical protein XP_002343927 isoform 3
[Homo sapiens]
Length = 738
Score = 31.2 bits (69), Expect = 1.0
Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 85 QKIGKVVHQPGPVMEFDYVICEECGKEF-MDSYLMNHFDLPT------CDNCRDA-DDKH 136
+K+ HQ E YV C ECGK F S+L++H T C C A +K
Sbjct: 498 EKLSLTNHQRIHTGEKPYV-CSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKS 556
Query: 137 KLITKTE---AKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIVKRSLEV 193
L T ++ Y +DC+ SQ + + ++ ++ E
Sbjct: 557 SLATHQRTHTGEKPYECRDCE---------------KAFSQKSQLNTHQRIHTGEKPYEC 601
Query: 194 WGSQEALEEAKEVRQENREKMKQKKFDKKVKELRRAVRSSVWKRETIVHQHEYGPEENLE 253
++A E E+ + R +K ++ E R+A R K I HQ + E+ E
Sbjct: 602 SLCRKAFFEKSELIRHLRTHTGEKPYE--CNECRKAFRE---KSSLINHQRIHTGEKPFE 656
Query: 254 DDMYRKTCTMCG 265
C+ CG
Sbjct: 657 -------CSECG 661
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 31.2 bits (69), Expect = 1.0
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 177 DMKLYLKLQIVKRSLEVWGS-----QEALEEAKEVRQENREKMKQKKFDKKVKELR-RAV 230
DMK+ L +K GS +E L+EA ++ ++ RE++K+ K +K+ E A+
Sbjct: 436 DMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEHEKLMEGELEAL 495
Query: 231 RSSVWKRETIVHQHEYGPEENLEDDMYRKTCTMCGHEL 268
R K++ + ++ EE E++ R C +L
Sbjct: 496 RQEFKKKDKTLKENSRKLEE--ENENLRAELQCCSTQL 531
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 31.2 bits (69), Expect = 1.0
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 177 DMKLYLKLQIVKRSLEVWGS-----QEALEEAKEVRQENREKMKQKKFDKKVKELR-RAV 230
DMK+ L +K GS +E L+EA ++ ++ RE++K+ K +K+ E A+
Sbjct: 581 DMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEHEKLMEGELEAL 640
Query: 231 RSSVWKRETIVHQHEYGPEENLEDDMYRKTCTMCGHEL 268
R K++ + ++ EE E++ R C +L
Sbjct: 641 RQEFKKKDKTLKENSRKLEE--ENENLRAELQCCSTQL 676
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,166,841
Number of Sequences: 37866
Number of extensions: 513990
Number of successful extensions: 5709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 4998
Number of HSP's gapped (non-prelim): 907
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.