Guide to the Human Genome
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Name: CC2D2A Sequence: fasta or formatted (1512aa) NCBI GI: 197209817
Description:

coiled-coil and C2 domain containing 2A isoform b

Referenced in:

Coiled-Coil Proteins
Planar Cell Polarity

Other entries for this name:
alt prot [1620aa] coiled-coil and C2 domain containing 2A isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         92           4
 C cysteine            0.8         12           1
 D aspartate           5.0         75           2
 E glutamate           9.5        143           4
 F phenylalanine       4.6         69           2
 G glycine             4.4         66           3
 H histidine           2.4         36           2
 I isoleucine          4.6         69           2
 K lysine              6.2         94           4
 L leucine             9.5        143           2
 M methionine          1.4         21           1
 N asparagine          3.8         57           2
 P proline             7.2        109           2
 Q glutamine           5.3         80           2
 R arginine            7.3        110           3
 S serine              6.8        103           2
 T threonine           4.8         73           3
 V valine              6.4         97           2
 W tryptophan          1.3         19           1
 Y tyrosine            2.9         44           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil and C2 domain containing 2A isoform b [... 
CC2D2A                0.982   coiled-coil and C2 domain containing 2A isoform a [...
CC2D2B                0.123   coiled-coil and C2 domain containing 2B isoform 1 [...
CC2D2B                0.071   coiled-coil and C2 domain containing 2B isoform 2 [...
CEP76                 0.013   centrosomal protein 76kDa 
SMC2                  0.008   structural maintenance of chromosomes 2 
SMC2                  0.008   structural maintenance of chromosomes 2 
SMC2                  0.008   structural maintenance of chromosomes 2 
TCHH                  0.008   trichohyalin 
MAP4K4                0.008   mitogen-activated protein kinase kinase kinase kinas...
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
MYO6                  0.007   myosin VI 
TTN                   0.007   titin isoform N2-A 
LOC727832             0.006   golgi autoantigen, golgin subfamily a-like 
DBNL                  0.006   drebrin-like isoform b 
DBNL                  0.006   drebrin-like isoform a 
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CALD1                 0.006   caldesmon 1 isoform 1 
HMMR                  0.006   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.006   hyaluronan-mediated motility receptor isoform b [Ho...
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TAF3                  0.006   RNA polymerase II transcription factor TAFII140 [Ho...
SFRS12                0.006   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.006   splicing factor, arginine/serine-rich 12 isoform b [...
AZI1                  0.006   5-azacytidine induced 1 isoform b 
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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