Search of human proteins with 4507797

Search of human proteins with 4507797

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]
         (145 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]           299   6e-82
gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens]      272   6e-74
gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d ...   270   4e-73
gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a ...   269   7e-73
gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a ...   269   7e-73
gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c ...   167   2e-42
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa...    54   6e-08
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi...    54   6e-08
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]             49   1e-06
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]          49   2e-06
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap...    47   7e-06
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]             47   7e-06
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]          44   5e-05
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s...    44   5e-05
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa...    44   5e-05
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]           44   5e-05
gi|37577122 ubiquitin-conjugating enzyme E2, J1 [Homo sapiens]         42   2e-04
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi...    41   4e-04
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap...    41   4e-04
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap...    41   4e-04
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]          41   4e-04
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]           41   4e-04
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]          40   5e-04
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]          40   5e-04
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s...    40   7e-04
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa...    40   9e-04
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s...    39   0.002
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa...    39   0.002
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]           39   0.002
gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo sa...    39   0.002

>gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]
          Length = 145

 Score =  299 bits (765), Expect = 6e-82
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYEN 60
           MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYEN
Sbjct: 1   MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYEN 60

Query: 61  RIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQ 120
           RIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQ
Sbjct: 61  RIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQ 120

Query: 121 ELRRLMMSKENMKLPQPPEGQTYNN 145
           ELRRLMMSKENMKLPQPPEGQTYNN
Sbjct: 121 ELRRLMMSKENMKLPQPPEGQTYNN 145


>gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens]
          Length = 370

 Score =  272 bits (696), Expect = 6e-74
 Identities = 129/143 (90%), Positives = 138/143 (96%)

Query: 3   VSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRI 62
           ++TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRT YENRI
Sbjct: 228 ITTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRI 287

Query: 63  YSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQEL 122
           YSLK+ECGPKYPEAPP VRFVTKINMNG+N+S+G+VD R+I VLAKWQNSYSIKVVLQEL
Sbjct: 288 YSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQEL 347

Query: 123 RRLMMSKENMKLPQPPEGQTYNN 145
           RRLMMSKENMKLPQPPEGQ Y+N
Sbjct: 348 RRLMMSKENMKLPQPPEGQCYSN 370


>gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d
           [Homo sapiens]
          Length = 147

 Score =  270 bits (689), Expect = 4e-73
 Identities = 131/147 (89%), Positives = 139/147 (94%), Gaps = 2/147 (1%)

Query: 1   MAVSTG--VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNY 58
           MA +TG  VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRT Y
Sbjct: 1   MAATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIY 60

Query: 59  ENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVV 118
           ENRIYSLK+ECGPKYPEAPP VRFVTKINMNG+N+S+G+VD R+I VLAKWQNSYSIKVV
Sbjct: 61  ENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVV 120

Query: 119 LQELRRLMMSKENMKLPQPPEGQTYNN 145
           LQELRRLMMSKENMKLPQPPEGQ Y+N
Sbjct: 121 LQELRRLMMSKENMKLPQPPEGQCYSN 147


>gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a
           [Homo sapiens]
          Length = 170

 Score =  269 bits (687), Expect = 7e-73
 Identities = 128/140 (91%), Positives = 135/140 (96%)

Query: 6   GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSL 65
           GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRT YENRIYSL
Sbjct: 31  GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90

Query: 66  KVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRL 125
           K+ECGPKYPEAPP VRFVTKINMNG+N+S+G+VD R+I VLAKWQNSYSIKVVLQELRRL
Sbjct: 91  KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150

Query: 126 MMSKENMKLPQPPEGQTYNN 145
           MMSKENMKLPQPPEGQ Y+N
Sbjct: 151 MMSKENMKLPQPPEGQCYSN 170


>gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a
           [Homo sapiens]
          Length = 170

 Score =  269 bits (687), Expect = 7e-73
 Identities = 128/140 (91%), Positives = 135/140 (96%)

Query: 6   GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSL 65
           GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRT YENRIYSL
Sbjct: 31  GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSL 90

Query: 66  KVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRL 125
           K+ECGPKYPEAPP VRFVTKINMNG+N+S+G+VD R+I VLAKWQNSYSIKVVLQELRRL
Sbjct: 91  KIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150

Query: 126 MMSKENMKLPQPPEGQTYNN 145
           MMSKENMKLPQPPEGQ Y+N
Sbjct: 151 MMSKENMKLPQPPEGQCYSN 170


>gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c
           [Homo sapiens]
          Length = 103

 Score =  167 bits (424), Expect = 2e-42
 Identities = 82/107 (76%), Positives = 92/107 (85%), Gaps = 6/107 (5%)

Query: 39  EDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
           ED+ L  +T       +T YENRIYSLK+ECGPKYPEAPP VRFVTKINMNG+N+S+G+V
Sbjct: 3   EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56

Query: 99  DARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN 145
           D R+I VLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ Y+N
Sbjct: 57  DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103


>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
           sapiens]
          Length = 157

 Score = 53.5 bits (127), Expect = 6e-08
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 40  DMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVD 99
           D   T   G I GPP T YE   Y L+++    YP  PP VRF+TKI    I++ +G + 
Sbjct: 33  DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI- 91

Query: 100 ARSIPVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN 145
              + +L  +W  + +++ VL  L+ L+ + E    P  P+     N
Sbjct: 92  --CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132


>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
           sapiens]
          Length = 200

 Score = 53.5 bits (127), Expect = 6e-08
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 40  DMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVD 99
           D   T   G I GPP T YE   Y L+++    YP  PP VRF+TKI    I++ +G + 
Sbjct: 33  DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI- 91

Query: 100 ARSIPVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN 145
              + +L  +W  + +++ VL  L+ L+ + E    P  P+     N
Sbjct: 92  --CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132


>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
          Length = 197

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 11  RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECG 70
           R  RL  EL         G   W  +D + M   R    I+G   T YE  ++ L+V   
Sbjct: 3   RASRLKRELHMLATEPPPGITCW--QDKDQMDDLR--AQILGGANTPYEKGVFKLEVIIP 58

Query: 71  PKYPEAPPSVRFVTKINMNGINNSSGM-VDARSIPVLAKWQNSYSIKVVLQELRRLMMSK 129
            +YP  PP +RF+T I    I+++  + +D   +P    W+ S +I  VL  + +L+MS+
Sbjct: 59  ERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSI-QLLMSE 117

Query: 130 EN 131
            N
Sbjct: 118 PN 119


>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
          Length = 170

 Score = 48.5 bits (114), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 15 LLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYP 74
          L  +L E  K   +G  S GL DD D  L RW  +IIGPP T YE  ++   +     YP
Sbjct: 10 LRRQLAELNKNPVEG-FSAGLIDDND--LYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYP 66

Query: 75 EAPPSVRFVTKI 86
            PP ++F+T+I
Sbjct: 67 LRPPKMKFITEI 78


>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
           sapiens]
          Length = 152

 Score = 46.6 bits (109), Expect = 7e-06
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 7   VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLK 66
           +  P   RL+ + +  Q+    G VS    ++  M    W  +I GP  T +E+  + L 
Sbjct: 1   MSTPARRRLMRDFKRLQEDPPAG-VSGAPSENNIMV---WNAVIFGPEGTPFEDGTFKLT 56

Query: 67  VECGPKYPEAPPSVRFVTKI-NMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRL 125
           +E   +YP  PP+VRFV+K+ + N   + S  +D     +  +W  +Y +  +L  ++ L
Sbjct: 57  IEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDI----LQNRWSPTYDVSSILTSIQSL 112

Query: 126 M 126
           +
Sbjct: 113 L 113


>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
          Length = 152

 Score = 46.6 bits (109), Expect = 7e-06
 Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 7   VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLK 66
           +  P   RL+ + +  Q+    G      E++    + +W  +I GP  T +E+  + L 
Sbjct: 1   MSTPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLV 56

Query: 67  VECGPKYPEAPPSVRFVTKI-NMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRL 125
           +E   +YP  PP+VRF++K+ + N   + S  +D     +  +W  +Y +  +L  ++ L
Sbjct: 57  IEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDI----LQNRWSPTYDVSSILTSIQSL 112

Query: 126 M 126
           +
Sbjct: 113 L 113


>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
          Length = 201

 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPV 105
           W   I+GPP + YE  ++ L +   P YP  PP V F T+I    I NS G++    + +
Sbjct: 87  WRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNI-NSQGVI---CLDI 142

Query: 106 LA-KWQNSYSIKVVLQELRRLM 126
           L   W  + +I  VL  +  L+
Sbjct: 143 LKDNWSPALTISKVLLSICSLL 164


>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
           sapiens]
          Length = 176

 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPV 105
           W   I+GPP + YE  ++ L +   P+YP  PP V F T+I    I NS G++    + +
Sbjct: 62  WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI-NSQGVI---CLDI 117

Query: 106 LA-KWQNSYSIKVVLQELRRLM 126
           L   W  + +I  VL  +  L+
Sbjct: 118 LKDNWSPALTISKVLLSICSLL 139


>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
           sapiens]
          Length = 193

 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPV 105
           W   I+GPP + YE  ++ L +   P+YP  PP V F T+I    I NS G++    + +
Sbjct: 79  WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI-NSQGVI---CLDI 134

Query: 106 LA-KWQNSYSIKVVLQELRRLM 126
           L   W  + +I  VL  +  L+
Sbjct: 135 LKDNWSPALTISKVLLSICSLL 156


>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
          Length = 147

 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)

Query: 14  RLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKY 73
           R+ +EL + Q+       +  + DD    L  W   I+GPP + Y+  ++ L V     Y
Sbjct: 5   RIQKELSDLQRDPPAHCSAGPVGDD----LFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 60

Query: 74  PEAPPSVRFVTKINMNGIN-NSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLM 126
           P  PP + F TKI    IN N S  +D     + ++W  + ++  VL  +  L+
Sbjct: 61  PFKPPKIAFTTKIYHPNINSNGSICLDI----LRSQWSPALTVSKVLLSICSLL 110


>gi|37577122 ubiquitin-conjugating enzyme E2, J1 [Homo sapiens]
          Length = 318

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 1   MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYEN 60
           M     +K P   RL++E  E    + D T  +  +  ED  L  W   + GPP ++++ 
Sbjct: 1   METRYNLKSPAVKRLMKEAAE----LKDPTDHYHAQPLED-NLFEWHFTVRGPPDSDFDG 55

Query: 61  RIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQ 120
            +Y  ++   P+YP  PPS+  +T      +     +  +   P    WQ S+SI+  L 
Sbjct: 56  GVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHP--ETWQPSWSIRTALL 113

Query: 121 ELRRLMMSK 129
            +   M +K
Sbjct: 114 AIIGFMPTK 122


>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
           sapiens]
          Length = 179

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 27  GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKI 86
           GD  +S   E D    L +W G I G   T YE+  Y L +E    YP   P+V+F+T  
Sbjct: 46  GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 102

Query: 87  NMNGINNSSGMVDARSIPVL-AKWQNSYSIKVVLQELRRLM 126
               ++    +     + +L  KW   Y ++ +L  ++ L+
Sbjct: 103 YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 139


>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
           sapiens]
          Length = 140

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 27  GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKI 86
           GD  +S   E D    L +W G I G   T YE+  Y L +E    YP   P+V+F+T  
Sbjct: 7   GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 63

Query: 87  NMNGINNSSGMVDARSIPVL-AKWQNSYSIKVVLQELRRLM 126
               ++    +     + +L  KW   Y ++ +L  ++ L+
Sbjct: 64  YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 100


>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
           sapiens]
          Length = 140

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 27  GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKI 86
           GD  +S   E D    L +W G I G   T YE+  Y L +E    YP   P+V+F+T  
Sbjct: 7   GDKGISAFPESDN---LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC 63

Query: 87  NMNGINNSSGMVDARSIPVL-AKWQNSYSIKVVLQELRRLM 126
               ++    +     + +L  KW   Y ++ +L  ++ L+
Sbjct: 64  YHPNVDTQGNI----CLDILKEKWSALYDVRTILLSIQSLL 100


>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPV 105
           W   I+GPP + YE  ++ L +     YP  PP V F T+I    I NS G++    + +
Sbjct: 93  WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNI-NSQGVI---CLDI 148

Query: 106 LA-KWQNSYSIKVVLQELRRLM 126
           L   W  + +I  VL  +  L+
Sbjct: 149 LKDNWSPALTISKVLLSICSLL 170


>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPV 105
           W   I+GPP + YE  ++ L +     YP  PP V F T+I    I NS G++    + +
Sbjct: 93  WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNI-NSQGVI---CLDI 148

Query: 106 LA-KWQNSYSIKVVLQELRRLM 126
           L   W  + +I  VL  +  L+
Sbjct: 149 LKDNWSPALTISKVLLSICSLL 170


>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
          Length = 236

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKI 86
          L D+ D  L  W   I GPP T YE   +  +++    YP +PP+ RF+TK+
Sbjct: 32 LVDEGD--LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKM 81


>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
          Length = 238

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKI 86
          L D+ D  L  W   I GPP T YE   +   ++    YP +PP+ RF+TK+
Sbjct: 32 LVDESD--LYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKM 81


>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
           sapiens]
          Length = 147

 Score = 40.0 bits (92), Expect = 7e-04
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 43  LTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGIN-NSSGMVDAR 101
           L  W   I+GP  + Y+  ++ L +     YP  PP V F TKI    IN N S  +D  
Sbjct: 30  LFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDI- 88

Query: 102 SIPVLAKWQNSYSIKVVLQELRRLM 126
              + ++W  + ++  VL  +  L+
Sbjct: 89  ---LRSQWSPALTVSKVLLSICSLL 110


>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
           sapiens]
          Length = 154

 Score = 39.7 bits (91), Expect = 9e-04
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 14  RLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKY 73
           RL++ELEE +K    G  ++     ++  L  W G+I+ P    Y+   + +++    +Y
Sbjct: 6   RLMKELEEIRKC---GMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEY 61

Query: 74  PEAPPSVRFVTKINMNGINNSSGMVDARSIPVLA--KWQNSYSIKVVLQELRRLM 126
           P  PP + F TKI    I+    +     +PV++   W+ +     V+Q L  L+
Sbjct: 62  PFKPPKITFKTKIYHPNIDEKGQV----CLPVISAENWKPATKTDQVIQSLIALV 112


>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
           sapiens]
          Length = 118

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGIN-NSSGMVDARSIP 104
           W   I+GP  + Y+  ++ L +     YP  PP V F T+I    IN N S  +D     
Sbjct: 4   WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI---- 59

Query: 105 VLAKWQNSYSIKVVLQELRRLM 126
           + ++W  + +I  VL  +  L+
Sbjct: 60  LRSQWSPALTISKVLLSICSLL 81


>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
           sapiens]
          Length = 147

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 46  WTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGIN-NSSGMVDARSIP 104
           W   I+GP  + Y+  ++ L +     YP  PP V F T+I    IN N S  +D     
Sbjct: 33  WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI---- 88

Query: 105 VLAKWQNSYSIKVVLQELRRLM 126
           + ++W  + +I  VL  +  L+
Sbjct: 89  LRSQWSPALTISKVLLSICSLL 110


>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
          Length = 354

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 12/118 (10%)

Query: 39  EDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVT------KINMNGIN 92
           + + +T+   +I GP  T YE   +     C P YP  PP V+ +T      + N N   
Sbjct: 124 DTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYR 183

Query: 93  NSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLP------QPPEGQTYN 144
           N    +          W  + SI  VL  ++ LM        P       P + + YN
Sbjct: 184 NGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNYN 241


>gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo
           sapiens]
          Length = 153

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 27/126 (21%), Positives = 64/126 (50%), Gaps = 11/126 (8%)

Query: 12  NFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGP 71
           + R+++ELE+ QK       +      +D  +  W  +++ P +  Y  + ++L++   P
Sbjct: 4   SMRVVKELEDLQKKPPPYLRNLS---SDDANVLVWHALLL-PDQPPYHLKAFNLRISFPP 59

Query: 72  KYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLA--KWQNSYSIKVVLQELRRLMMSK 129
           +YP  PP ++F TKI    ++ +  +     +P+++   W+       VL+ L  +++++
Sbjct: 60  EYPFKPPMIKFTTKIYHPNVDENGQI----CLPIISSENWKPCTKTCQVLEAL-NVLVNR 114

Query: 130 ENMKLP 135
            N++ P
Sbjct: 115 PNIREP 120


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,343,585
Number of Sequences: 37866
Number of extensions: 264415
Number of successful extensions: 484
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 426
Number of HSP's gapped (non-prelim): 72
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.