Guide to the Human Genome
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Name: UBE2T Sequence: fasta or formatted (197aa) NCBI GI: 7661808
Description:

ubiquitin-conjugating enzyme E2T

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         14           1
 C cysteine            1.0          2           1
 D aspartate           6.6         13           2
 E glutamate           7.1         14           3
 F phenylalanine       3.0          6           1
 G glycine             4.1          8           2
 H histidine           2.5          5           1
 I isoleucine          6.1         12           2
 K lysine              8.1         16           2
 L leucine             9.6         19           2
 M methionine          3.0          6           1
 N asparagine          4.1          8           1
 P proline             9.6         19           3
 Q glutamine           5.6         11           1
 R arginine            6.1         12           1
 S serine              5.1         10           2
 T threonine           4.1          8           1
 V valine              3.6          7           1
 W tryptophan          1.5          3           1
 Y tyrosine            2.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2T 
UBE2N                 0.301   ubiquitin-conjugating enzyme E2N 
UBE2D3                0.272   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D2                0.270   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D1                0.267   ubiquitin-conjugating enzyme E2D 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.264   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D4                0.262   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.262   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2NL                0.254   ubiquitin-conjugating enzyme E2N-like 
UBE2E1                0.246   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E2                0.246   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.243   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.243   ubiquitin-conjugating enzyme E2E 3 
UBE2D2                0.236   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2K                 0.233   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2L3                0.215   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2B                 0.212   ubiquitin-conjugating enzyme E2B 
UBE2E1                0.209   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2A                 0.209   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2C                 0.194   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2K                 0.194   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2L6                0.181   ubiquitin-conjugating enzyme E2L 6 isoform 1 
UBE2S                 0.181   ubiquitin-conjugating enzyme E2S 
UBE2C                 0.178   ubiquitin-conjugating enzyme E2C isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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