Guide to the Human Genome
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Name: UBE2V1 Sequence: fasta or formatted (170aa) NCBI GI: 40806167
Description:

ubiquitin-conjugating enzyme E2 variant 1 isoform a

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [103aa] ubiquitin-conjugating enzyme E2 variant 1 isoform c
alt mRNA [170aa] ubiquitin-conjugating enzyme E2 variant 1 isoform a
alt prot [147aa] ubiquitin-conjugating enzyme E2 variant 1 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4          4           1
 C cysteine            1.8          3           1
 D aspartate           3.5          6           2
 E glutamate           8.8         15           2
 F phenylalanine       2.4          4           1
 G glycine             8.2         14           1
 H histidine           0.6          1           1
 I isoleucine          4.7          8           2
 K lysine              7.6         13           1
 L leucine             8.2         14           2
 M methionine          4.1          7           2
 N asparagine          5.3          9           1
 P proline             7.6         13           2
 Q glutamine           4.1          7           1
 R arginine            6.5         11           2
 S serine              7.6         13           2
 T threonine           3.5          6           1
 V valine              7.6         13           2
 W tryptophan          1.8          3           1
 Y tyrosine            3.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2 variant 1 isoform a ... 
UBE2V1                1.000   ubiquitin-conjugating enzyme E2 variant 1 isoform a ...
TMEM189-UBE2V1        0.813   TMEM189-UBE2V1 readthrough transcript 
UBE2V1                0.813   ubiquitin-conjugating enzyme E2 variant 1 isoform d ...
UBE2V2                0.746   ubiquitin-conjugating enzyme E2v2 
UBE2V1                0.502   ubiquitin-conjugating enzyme E2 variant 1 isoform c ...
UBE2K                 0.092   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2K                 0.092   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2G1                0.076   ubiquitin-conjugating enzyme E2G 1 
UBE2E1                0.073   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E1                0.070   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2A                 0.067   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.067   ubiquitin-conjugating enzyme E2B 
UBE2E2                0.067   ubiquitin-conjugating enzyme E2E 2 
UBE2D1                0.061   ubiquitin-conjugating enzyme E2D 1 
UBE2C                 0.061   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.061   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.061   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2T                 0.061   ubiquitin-conjugating enzyme E2T 
UBE2E3                0.058   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.058   ubiquitin-conjugating enzyme E2E 3 
UBE2R2                0.052   ubiquitin-conjugating enzyme UBC3B 
UBE2D4                0.049   ubiquitin-conjugating enzyme E2D 4 (putative) 
CDC34                 0.046   ubiquitin-conjugating enzyme Cdc34 
UBE2L6                0.046   ubiquitin-conjugating enzyme E2L 6 isoform 1 
UBE2D2                0.046   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2D2                0.046   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.046   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.046   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.046   ubiquitin-conjugating enzyme E2D 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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