Guide to the Human Genome
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Name: UBE2J1 Sequence: fasta or formatted (318aa) NCBI GI: 37577122
Description:

ubiquitin-conjugating enzyme E2, J1

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         26           2
 C cysteine            1.3          4           2
 D aspartate           6.0         19           2
 E glutamate           5.7         18           2
 F phenylalanine       4.1         13           1
 G glycine             6.3         20           2
 H histidine           3.5         11           2
 I isoleucine          5.7         18           2
 K lysine              5.0         16           2
 L leucine             9.1         29           2
 M methionine          1.9          6           1
 N asparagine          2.8          9           1
 P proline             6.6         21           2
 Q glutamine           5.7         18           3
 R arginine            5.3         17           2
 S serine             10.1         32           2
 T threonine           6.0         19           2
 V valine              3.5         11           1
 W tryptophan          0.9          3           1
 Y tyrosine            2.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2, J1 
UBE2J2                0.174   ubiquitin conjugating enzyme E2, J2 isoform 2 
UBE2J2                0.158   ubiquitin conjugating enzyme E2, J2 isoform 1 
UBE2J2                0.121   ubiquitin conjugating enzyme E2, J2 isoform 3 
UBE2J2                0.121   ubiquitin conjugating enzyme E2, J2 isoform 3 
UBE2E1                0.084   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2D1                0.084   ubiquitin-conjugating enzyme E2D 1 
UBE2E2                0.081   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.076   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.076   ubiquitin-conjugating enzyme E2E 3 
UBE2D4                0.073   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.071   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D2                0.069   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2G1                0.068   ubiquitin-conjugating enzyme E2G 1 
UBE2N                 0.066   ubiquitin-conjugating enzyme E2N 
UBE2D3                0.065   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2E1                0.063   ubiquitin-conjugating enzyme E2E 1 isoform 2 
CDC34                 0.058   ubiquitin-conjugating enzyme Cdc34 
UBE2R2                0.055   ubiquitin-conjugating enzyme UBC3B 
UBE2G2                0.052   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2B                 0.048   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.047   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2D2                0.045   ubiquitin-conjugating enzyme E2D 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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