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Search of human proteins with 4507445
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507445 transcription factor AP-2 gamma [Homo sapiens]
(450 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507445 transcription factor AP-2 gamma [Homo sapiens] 915 0.0
gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens] 534 e-152
gi|109389358 transcription factor AP-2 alpha isoform c [Homo sap... 508 e-144
gi|73760407 transcription factor AP-2 alpha isoform b [Homo sapi... 506 e-143
gi|118582289 transcription factor AP-2 beta [Homo sapiens] 486 e-137
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 392 e-109
gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens] 313 2e-85
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 39 0.007
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 39 0.013
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 36 0.081
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 36 0.081
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 35 0.14
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 35 0.14
gi|157388908 hypothetical protein LOC54954 [Homo sapiens] 35 0.14
gi|55750053 atrophin-1 [Homo sapiens] 35 0.18
gi|55750041 atrophin-1 [Homo sapiens] 35 0.18
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 34 0.24
gi|54860079 nadrin isoform 1 [Homo sapiens] 34 0.24
gi|54860105 nadrin isoform 2 [Homo sapiens] 34 0.24
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 34 0.24
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 34 0.24
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 34 0.24
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 34 0.31
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 34 0.31
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|153792074 proline rich 12 [Homo sapiens] 34 0.31
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 33 0.40
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.53
>gi|4507445 transcription factor AP-2 gamma [Homo sapiens]
Length = 450
Score = 915 bits (2366), Expect = 0.0
Identities = 450/450 (100%), Positives = 450/450 (100%)
Query: 1 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF 60
MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF
Sbjct: 1 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF 60
Query: 61 PPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGR 120
PPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGR
Sbjct: 61 PPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGR 120
Query: 121 PAGLLPHLSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNV 180
PAGLLPHLSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNV
Sbjct: 121 PAGLLPHLSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNV 180
Query: 181 DDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVGAVMNPTEVFCSVPGRLSLLSSTSKY 240
DDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVGAVMNPTEVFCSVPGRLSLLSSTSKY
Sbjct: 181 DDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVGAVMNPTEVFCSVPGRLSLLSSTSKY 240
Query: 241 KVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVT 300
KVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVT
Sbjct: 241 KVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVT 300
Query: 301 LLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCK 360
LLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCK
Sbjct: 301 LLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCK 360
Query: 361 EFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEAL 420
EFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEAL
Sbjct: 361 EFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEAL 420
Query: 421 IVIDKSYMNPGDQSPADSNKTLEKMEKHRK 450
IVIDKSYMNPGDQSPADSNKTLEKMEKHRK
Sbjct: 421 IVIDKSYMNPGDQSPADSNKTLEKMEKHRK 450
>gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]
Length = 437
Score = 534 bits (1375), Expect = e-152
Identities = 294/459 (64%), Positives = 351/459 (76%), Gaps = 31/459 (6%)
Query: 1 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF 60
MLWK+TDN+KYE DCEDRHDG+SNG R+P L + GQ Y+ APPLSHT A++QPP YF
Sbjct: 1 MLWKLTDNIKYE-DCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YF 58
Query: 61 PPPYQQLAYSQSADPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHH 118
PPPYQ + Y QS DPYSH+ + Y+ +NPLH QP P Q WPG RQSQE L +H
Sbjct: 59 PPPYQPI-YPQSQDPYSHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHR 112
Query: 119 GRPAGLLPH-LSGLEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEV 177
G LPH LSGL+ RRD YRR + LL HAL ++GL + L +H +PH ++EV
Sbjct: 113 G-----LPHQLSGLDP-----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEV 159
Query: 178 QNVDDQHLLLHDQTVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLS 232
+V+D + + DQTVI+KGP+S++K+ N +P K+ L G V+NP EVFCSVPGRLS
Sbjct: 160 PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLS 219
Query: 233 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG 292
LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG
Sbjct: 220 LLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG 279
Query: 293 RRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNML 352
RRKAA+VTLLTSLVEGEAVHLARDF YVCE EFP+K VAE+L R H NE RKNML
Sbjct: 280 RRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNML 338
Query: 353 LAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSAL 412
LA +Q+CKEFT+LL+QDR+P G SR P+LE IQ+CL+HF+LI+HGFGS A+CAAV+AL
Sbjct: 339 LATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTAL 398
Query: 413 QNYIKEALIVIDKSYMNPGDQSPADSN-KTLEKMEKHRK 450
QNY+ EAL +DK Y++ S D+N K+ +K EKHRK
Sbjct: 399 QNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 437
>gi|109389358 transcription factor AP-2 alpha isoform c [Homo
sapiens]
Length = 433
Score = 508 bits (1309), Expect = e-144
Identities = 282/446 (63%), Positives = 338/446 (75%), Gaps = 30/446 (6%)
Query: 14 DCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSA 73
D +DRHDG+SNG R+P L + GQ Y+ APPLSHT A++QPP YFPPPYQ + Y QS
Sbjct: 9 DWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YFPPPYQPI-YPQSQ 66
Query: 74 DPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHHGRPAGLLPH-LSG 130
DPYSH+ + Y+ +NPLH QP P Q WPG RQSQE L +H G LPH LSG
Sbjct: 67 DPYSHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHRG-----LPHQLSG 116
Query: 131 LEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNVDDQHLLLHDQ 190
L+ RRD YRR + LL HAL ++GL + L +H +PH ++EV +V+D + + DQ
Sbjct: 117 LDP-----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEVPHVEDPGINIPDQ 168
Query: 191 TVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVA 245
TVI+KGP+S++K+ N +P K+ L G V+NP EVFCSVPGRLSLLSSTSKYKVTVA
Sbjct: 169 TVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVA 228
Query: 246 EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSL 305
EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAA+VTLLTSL
Sbjct: 229 EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSL 288
Query: 306 VEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCKEFTEL 365
VEGEAVHLARDF YVCE EFP+K VAE+L R H NE RKNMLLA +Q+CKEFT+L
Sbjct: 289 VEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNMLLATKQICKEFTDL 347
Query: 366 LSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEALIVIDK 425
L+QDR+P G SR P+LE IQ+CL+HF+LI+HGFGS A+CAAV+ALQNY+ EAL +DK
Sbjct: 348 LAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDK 407
Query: 426 SYMNPGDQSPADSN-KTLEKMEKHRK 450
Y++ S D+N K+ +K EKHRK
Sbjct: 408 MYLSNNPNSHTDNNAKSSDKEEKHRK 433
>gi|73760407 transcription factor AP-2 alpha isoform b [Homo
sapiens]
Length = 431
Score = 506 bits (1303), Expect = e-143
Identities = 281/443 (63%), Positives = 336/443 (75%), Gaps = 30/443 (6%)
Query: 17 DRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPY 76
DRHDG+SNG R+P L + GQ Y+ APPLSHT A++QPP YFPPPYQ + Y QS DPY
Sbjct: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YFPPPYQPI-YPQSQDPY 67
Query: 77 SHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHHGRPAGLLPH-LSGLEA 133
SH+ + Y+ +NPLH QP P Q WPG RQSQE L +H G LPH LSGL+
Sbjct: 68 SHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHRG-----LPHQLSGLDP 117
Query: 134 GAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNVDDQHLLLHDQTVI 193
RRD YRR + LL HAL ++GL + L +H +PH ++EV +V+D + + DQTVI
Sbjct: 118 -----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEVPHVEDPGINIPDQTVI 169
Query: 194 RKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQ 248
+KGP+S++K+ N +P K+ L G V+NP EVFCSVPGRLSLLSSTSKYKVTVAEVQ
Sbjct: 170 KKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQ 229
Query: 249 RRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLVEG 308
RRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAA+VTLLTSLVEG
Sbjct: 230 RRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEG 289
Query: 309 EAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCKEFTELLSQ 368
EAVHLARDF YVCE EFP+K VAE+L R H NE RKNMLLA +Q+CKEFT+LL+Q
Sbjct: 290 EAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNMLLATKQICKEFTDLLAQ 348
Query: 369 DRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEALIVIDKSYM 428
DR+P G SR P+LE IQ+CL+HF+LI+HGFGS A+CAAV+ALQNY+ EAL +DK Y+
Sbjct: 349 DRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYL 408
Query: 429 NPGDQSPADSN-KTLEKMEKHRK 450
+ S D+N K+ +K EKHRK
Sbjct: 409 SNNPNSHTDNNAKSSDKEEKHRK 431
>gi|118582289 transcription factor AP-2 beta [Homo sapiens]
Length = 460
Score = 486 bits (1251), Expect = e-137
Identities = 275/464 (59%), Positives = 337/464 (72%), Gaps = 29/464 (6%)
Query: 1 MLWKITDNVKYEEDCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF 60
MLWK+ +NVKYE+ EDRHDG + + R+ L S Q YS APPLSHT +++QPP YF
Sbjct: 12 MLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPP-YF 70
Query: 61 PPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQE-GAGLPSHHG 119
PPPYQ L Y QS DPYSH+ + Y+ +NPLHQP QQ W RQ QE G+ S
Sbjct: 71 PPPYQPLPYHQSQDPYSHVNDPYS--LNPLHQP-----QQHPWGQRQRQEVGSEAGSLLP 123
Query: 120 RPAGLLPHLSGLEAGAVSARRDAY--RRSDLLLPHAHALDAAGLAENLGLHDMPHQ-MDE 176
+P LP LSGL+ RRD + RR D+LL AH AG+ ++L LH + H M++
Sbjct: 124 QPRAALPQLSGLDP-----RRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMED 178
Query: 177 VQNVDDQH---LLLHDQTVIRKGPISMTKNPLNLPCQKE--LVGAVMNPTEVFCSVPGRL 231
VQ+V+D + + L DQ+VI+K P+ K+ +L K+ L G +N EVFCSVPGRL
Sbjct: 179 VQSVEDANNSGMNLLDQSVIKKVPVP-PKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRL 237
Query: 232 SLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPA 291
SLLSSTSKYKVTV EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRE+L+KIGLNLPA
Sbjct: 238 SLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPA 297
Query: 292 GRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNM 351
GRRKAA+VTLLTSLVEGEAVHLARDF Y+CE EFP+K V+EYL R H +++ +RKNM
Sbjct: 298 GRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHT-DPSDLHSRKNM 356
Query: 352 LLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSA 411
LLA +QLCKEFT+LL+QDRTP G SR +P+LE IQ+CL+HFSLITHGFG+ AICAA++A
Sbjct: 357 LLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTA 416
Query: 412 LQNYIKEALIVIDKSYMNPGDQSPADS-----NKTLEKMEKHRK 450
LQNY+ EAL +DK ++N + S +KT +K EKHRK
Sbjct: 417 LQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK 460
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 392 bits (1008), Expect = e-109
Identities = 242/444 (54%), Positives = 295/444 (66%), Gaps = 31/444 (6%)
Query: 21 GSSNGNPRVPHLSSAGQHLYSPAPPLSHT----GVAEYQPPPYFPPPYQQ--LAYSQSAD 74
G++ G R LSS Q Y PAPPL HT AE+QPP YFPPPY Q L Y Q+ D
Sbjct: 16 GAAAGGAR---LSSLPQAAYGPAPPLCHTPAATAAAEFQPP-YFPPPYPQPPLPYGQAPD 71
Query: 75 P---YSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGLLPHLSGL 131
+ HL + PL QP P Q AW ++ A H P GLL +
Sbjct: 72 AAAAFPHLAGDPYGGLAPLAQPQPP---QAAWAAPRAAARA-----HEEPPGLLAPPA-- 121
Query: 132 EAGAVSARRDAYRRSDLLLPHAHALDAAGLAEN-LGLHDMPHQ--MDEVQNVDDQHLLLH 188
A + RRD Y + L H A A GLA+ LGL + ++++Q +D+ + L
Sbjct: 122 RALGLDPRRD-YATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLL 180
Query: 189 DQTVIRKGPISMTKNPLN-LPCQKE-LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVAE 246
DQ+VI+K PI + L+ L K+ LVG + NP EVFCSVPGRLSLLSSTSKYKVTV E
Sbjct: 181 DQSVIKKVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGE 240
Query: 247 VQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLV 306
VQRRLSPPECLNASLLGGVLRRAKSKNGGR LRE+L+KIGLNLPAGRRKAA+VTLLTSLV
Sbjct: 241 VQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLV 300
Query: 307 EGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCKEFTELL 366
EGEAVHLARDF YVCE EFP+K AEYL R H E+ +RK+MLLAA+Q+CKEF +L+
Sbjct: 301 EGEAVHLARDFGYVCETEFPAKAAAEYLCRQH-ADPGELHSRKSMLLAAKQICKEFADLM 359
Query: 367 SQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEALIVIDKS 426
+QDR+P G SR A +LE +Q+CL+HFSLITHGFG AICAA++A QNY+ E+L +DK
Sbjct: 360 AQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKM 419
Query: 427 YMNPGDQSPADSNKTLEKMEKHRK 450
+++ ++ K EK KHRK
Sbjct: 420 FLSSVGSGHGET-KASEKDAKHRK 442
>gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens]
Length = 452
Score = 313 bits (802), Expect = 2e-85
Identities = 203/460 (44%), Positives = 257/460 (55%), Gaps = 67/460 (14%)
Query: 14 DCEDRHDGSSNGN-PRVPHLSSAGQHL--YSPAPPLSHTGVAEYQPPPYFPPPYQQLAYS 70
D E RHDGS++ ++ L S YS + PL+++ PYF +Q
Sbjct: 11 DAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLH 70
Query: 71 QSADPYS--HLGEAY---AAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGL- 124
+ Y H A A ++N LH Q HHG P
Sbjct: 71 HQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQ----------------IHHGEPTDFI 114
Query: 125 -LPHLSGLEAGAVSARR------DAYRRSDL-LLPHAHALDAAGLAENLGLHDMPHQMDE 176
L + L++ + +R DAYRR DL L+ H G+H
Sbjct: 115 NLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMSHG---------SQYGMHP------- 158
Query: 177 VQNVDDQHLLLHDQTVIRKGPISMTKNPLNLPCQKELVG----------AVMNPTEVFCS 226
DQ LL + + + C L G V+NPT++FCS
Sbjct: 159 -----DQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCS 213
Query: 227 VPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIG 286
VPGRLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD++G
Sbjct: 214 VPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLG 273
Query: 287 LNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMA 346
LNLPAGRRKAA+VTLLTSLVEGEA+HLARDF Y CE EFP+K V E+L R H+ + E
Sbjct: 274 LNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHM-EQKEQT 332
Query: 347 ARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAIC 406
ARK M+LA +Q+CKEF +LLSQDR+P G+SR P+L+ +IQ L+HFSLITHGFG+ AIC
Sbjct: 333 ARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAIC 392
Query: 407 AAVSALQNYIKEALIVIDK--SYMNPGDQSPADSNKTLEK 444
AA+S Q + E L ++K ++ N G + EK
Sbjct: 393 AALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEK 432
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 39.3 bits (90), Expect = 0.007
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 26 NPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPP-PYQQLAYSQSADPYSHLGEAYA 84
+PRVP L G +PAP + ++ PP+ PP P + SA P G +
Sbjct: 632 HPRVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPS 691
Query: 85 AAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGLLPHLSGLEAGA 135
A P +P P P + G +P P LLP AG+
Sbjct: 692 AGPVPSARPGP--------PTTANHLGLSVPGLVSVPPRLLPGPENHRAGS 734
>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
[Homo sapiens]
Length = 387
Score = 38.5 bits (88), Expect = 0.013
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 24/99 (24%)
Query: 36 GQHLYSPAPPLSHTG--------VAEYQPPPYFPP---PYQQLAYSQS--ADPYSHLGEA 82
GQH PP+ G + + Q PPY PP P QQ + + D YSH G
Sbjct: 222 GQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGG-- 279
Query: 83 YAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRP 121
Q P G QQ +P SQ G ++ G P
Sbjct: 280 ---------QGPPEGMNQQYYPDGNSQYGQQQDAYQGPP 309
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 35.8 bits (81), Expect = 0.081
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 18/170 (10%)
Query: 18 RHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYS 77
RH+G VP+ + GQ PP ++ Q P P Q D Y+
Sbjct: 1383 RHEGEMYS---VPYSTGQGQPQQQQLPPAQPQPASQQQAAQ--PSPQQ--------DVYN 1429
Query: 78 HLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGLLPHLSG--LEAGA 135
G AY A + P G Q +P + ++ P + P + G ++A A
Sbjct: 1430 QYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASA 1489
Query: 136 VSARRDA--YRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNVDDQ 183
A++ R+D+ +A+ + H + ++ DE+ + D +
Sbjct: 1490 EVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGV-NRTDEMLHTDQR 1538
Score = 33.5 bits (75), Expect = 0.40
Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 28 RVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLA-----------YSQSADPY 76
+ PH + Q PP + Y P PP Q A + QS PY
Sbjct: 492 QTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPY 551
Query: 77 SHLGEAYAAAINPLHQPAP-TGSQQQAWPGRQSQE 110
S QPAP T SQQ A+P QSQ+
Sbjct: 552 SQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQ 586
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 14 DCEDRHDGS--SNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPP 58
D H+GS S+G + P+ SA P PP++ + YQPPP
Sbjct: 1536 DQRANHEGSWPSHGTRQPPYGPSA------PVPPMTRPPPSNYQPPP 1576
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 35.8 bits (81), Expect = 0.081
Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 16/120 (13%)
Query: 21 GSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLG 80
GSS P P PAPPL T PPP PP + S S G
Sbjct: 141 GSSGAQPSAPP---------PPAPPLPPTPSPPPPPPPPPPPALSGYTTTNSGGGGSS-G 190
Query: 81 EAYAAAI---NPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRP---AGLLPHLSGLEAG 134
+ ++ L AP + A G + + G G P H P AG+ SG AG
Sbjct: 191 KGHSRDFVLRRDLSATAPAAAMHGAPLGGEQRSGTGSPQHPAPPPHSAGMFISASGTYAG 250
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 35.0 bits (79), Expect = 0.14
Identities = 30/106 (28%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 31 HLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPL 90
H + G L S P + H A PPP PPP Q P SH + A + P+
Sbjct: 1602 HHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHLVQ--QPNSHQQHSVAHVVGPV 1659
Query: 91 HQPAPTGSQQQAWPGRQ---SQEGAGLPSHHGRPAGLLPHLSGLEA 133
H P G G HH P L GL+A
Sbjct: 1660 HAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQA 1705
Score = 29.3 bits (64), Expect = 7.6
Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 32/123 (26%)
Query: 31 HLSSAGQHLYSPAPP---------------------LSHTGVAEYQPPPYFPPPYQQLAY 69
H +AG HL P PP H V PPP PPP +
Sbjct: 1669 HSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLA 1728
Query: 70 SQSADPYSHLGEAYAAAINPLHQ-----PAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGL 124
S H + A +P HQ P+ +P + + P +P+G
Sbjct: 1729 S------GHHTTSAQALHHPPHQGPPLFPSSAHPTVPPYPSQATHHTTLGPGPQHQPSGT 1782
Query: 125 LPH 127
PH
Sbjct: 1783 GPH 1785
Score = 28.9 bits (63), Expect = 9.9
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 56 PPPYFPPP----YQQLAYSQSADPYSHLGEAYAAAI---NPLHQPAPTGSQQQAWPGRQS 108
PPP PPP YQ S + Y+ L + + + +Q P + QQ PG
Sbjct: 1545 PPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGPNQALPGTTSQQTVPGHHV 1604
Query: 109 QEGAGLPS-----HHGRPAGLLP 126
G LPS HH A ++P
Sbjct: 1605 TPGHFLPSQNPTIHHQTAAAVVP 1627
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 35.0 bits (79), Expect = 0.14
Identities = 30/106 (28%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 31 HLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPL 90
H + G L S P + H A PPP PPP Q P SH + A + P+
Sbjct: 1602 HHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHLVQ--QPNSHQQHSVAHVVGPV 1659
Query: 91 HQPAPTGSQQQAWPGRQ---SQEGAGLPSHHGRPAGLLPHLSGLEA 133
H P G G HH P L GL+A
Sbjct: 1660 HAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQA 1705
Score = 29.3 bits (64), Expect = 7.6
Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 32/123 (26%)
Query: 31 HLSSAGQHLYSPAPP---------------------LSHTGVAEYQPPPYFPPPYQQLAY 69
H +AG HL P PP H V PPP PPP +
Sbjct: 1669 HSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLA 1728
Query: 70 SQSADPYSHLGEAYAAAINPLHQ-----PAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGL 124
S H + A +P HQ P+ +P + + P +P+G
Sbjct: 1729 S------GHHTTSAQALHHPPHQGPPLFPSSAHPTVPPYPSQATHHTTLGPGPQHQPSGT 1782
Query: 125 LPH 127
PH
Sbjct: 1783 GPH 1785
Score = 28.9 bits (63), Expect = 9.9
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 56 PPPYFPPP----YQQLAYSQSADPYSHLGEAYAAAI---NPLHQPAPTGSQQQAWPGRQS 108
PPP PPP YQ S + Y+ L + + + +Q P + QQ PG
Sbjct: 1545 PPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGPNQALPGTTSQQTVPGHHV 1604
Query: 109 QEGAGLPS-----HHGRPAGLLP 126
G LPS HH A ++P
Sbjct: 1605 TPGHFLPSQNPTIHHQTAAAVVP 1627
>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
Length = 1096
Score = 35.0 bits (79), Expect = 0.14
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 25 GNPRVPHLS----SAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLG 80
GNP +P SAG+ ++S P +Y PPP+ P L +S A LG
Sbjct: 427 GNPPLPRNQVGTISAGKPMFSHQVPQK----VKY-PPPFPVGPNSSLLFSSHA-----LG 476
Query: 81 EAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAG 123
E++A + +P+ Q +P + ++ SQ LPS P G
Sbjct: 477 ESHAFSEDPMLQNSPFANWAVSYDSSASQFPNYLPSKASPPLG 519
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 34.7 bits (78), Expect = 0.18
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 12 EEDCEDRHDGSSNGNP--RVPHLSSAGQ----HLYSPAPPLSHTGVAEYQP-PPYFPPPY 64
++ + +H G+S P PH G H Y+ +P L + Y P P + PPP+
Sbjct: 496 QQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLG--SLRPYPPGPAHLPPPH 553
Query: 65 QQLAYSQS------ADPYSHLGEAYAAAINPLHQPAPTGSQQQA 102
Q++YSQ+ S+ + + P P+P+ Q A
Sbjct: 554 SQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGA 597
Score = 33.1 bits (74), Expect = 0.53
Identities = 40/141 (28%), Positives = 51/141 (36%), Gaps = 33/141 (23%)
Query: 22 SSNGNPRVPH-------LSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSAD 74
+S P PH LS + Q P L V PPP PPPY +L + +A
Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP--PPPYGRLLANSNAH 458
Query: 75 P--YSHLGEAYAAAINPL------HQPAPTGSQQQAWPGRQSQE----------GA---- 112
P + A + A P+ HQ QQQ +Q Q+ GA
Sbjct: 459 PGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP 518
Query: 113 --GLPSHHGRPAGLLPHLSGL 131
G SHH P + P L L
Sbjct: 519 LEGGSSHHAHPYAMSPSLGSL 539
Score = 30.4 bits (67), Expect = 3.4
Identities = 36/128 (28%), Positives = 41/128 (32%), Gaps = 22/128 (17%)
Query: 20 DGSSNGNPRVPHLSSAGQHLYSP---------APPLSHTGVAEYQPPPYFPPPYQQLAYS 70
DGSS+ S +YSP + LS Y PPP FPP
Sbjct: 116 DGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPP-------- 167
Query: 71 QSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWP--GRQSQEGAGLPSHHGR--PAGLLP 126
S P A+ P PTG P R Q G P H + P G
Sbjct: 168 -SPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGG 226
Query: 127 HLSGLEAG 134
LSG G
Sbjct: 227 VLSGPPMG 234
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 34.7 bits (78), Expect = 0.18
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 12 EEDCEDRHDGSSNGNP--RVPHLSSAGQ----HLYSPAPPLSHTGVAEYQP-PPYFPPPY 64
++ + +H G+S P PH G H Y+ +P L + Y P P + PPP+
Sbjct: 496 QQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLG--SLRPYPPGPAHLPPPH 553
Query: 65 QQLAYSQS------ADPYSHLGEAYAAAINPLHQPAPTGSQQQA 102
Q++YSQ+ S+ + + P P+P+ Q A
Sbjct: 554 SQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGA 597
Score = 33.1 bits (74), Expect = 0.53
Identities = 40/141 (28%), Positives = 51/141 (36%), Gaps = 33/141 (23%)
Query: 22 SSNGNPRVPH-------LSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSAD 74
+S P PH LS + Q P L V PPP PPPY +L + +A
Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP--PPPYGRLLANSNAH 458
Query: 75 P--YSHLGEAYAAAINPL------HQPAPTGSQQQAWPGRQSQE----------GA---- 112
P + A + A P+ HQ QQQ +Q Q+ GA
Sbjct: 459 PGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP 518
Query: 113 --GLPSHHGRPAGLLPHLSGL 131
G SHH P + P L L
Sbjct: 519 LEGGSSHHAHPYAMSPSLGSL 539
Score = 30.4 bits (67), Expect = 3.4
Identities = 36/128 (28%), Positives = 41/128 (32%), Gaps = 22/128 (17%)
Query: 20 DGSSNGNPRVPHLSSAGQHLYSP---------APPLSHTGVAEYQPPPYFPPPYQQLAYS 70
DGSS+ S +YSP + LS Y PPP FPP
Sbjct: 116 DGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPP-------- 167
Query: 71 QSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWP--GRQSQEGAGLPSHHGR--PAGLLP 126
S P A+ P PTG P R Q G P H + P G
Sbjct: 168 -SPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGG 226
Query: 127 HLSGLEAG 134
LSG G
Sbjct: 227 VLSGPPMG 234
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 34.3 bits (77), Expect = 0.24
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 21 GSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLG 80
G+ +G P P S+ SP+P S + + PPP PP DP+
Sbjct: 178 GTGDGGPAPPPAPSSASS--SPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTD 235
Query: 81 EAYAAAINP--LHQP-APTGSQQQAWPGRQSQE 110
EAY+ P + P PTGS + G S E
Sbjct: 236 EAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPE 268
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 34.3 bits (77), Expect = 0.24
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 22 SSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGE 81
SS+G + P S SP+PP HTG PP Q A SQ + P
Sbjct: 655 SSSGTSQHPPSLSPKPPTRSPSPPTQHTG----------QPPGQPSAPSQLSAP-----R 699
Query: 82 AYAAAINPLHQP--APTGSQQQAWPGRQSQEGA-------GLPSHHG 119
Y+++++P+ P P QA P ++ + LPS HG
Sbjct: 700 RYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHG 746
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 34.3 bits (77), Expect = 0.24
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 22 SSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGE 81
SS+G + P S SP+PP HTG PP Q A SQ + P
Sbjct: 577 SSSGTSQHPPSLSPKPPTRSPSPPTQHTG----------QPPGQPSAPSQLSAP-----R 621
Query: 82 AYAAAINPLHQP--APTGSQQQAWPGRQSQEGA-------GLPSHHG 119
Y+++++P+ P P QA P ++ + LPS HG
Sbjct: 622 RYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHG 668
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 34.3 bits (77), Expect = 0.24
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 53 EYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAI---NPLHQPAPTGS--------QQQ 101
+ QPPP PP Q + + +A P + G A A A P AP GS Q
Sbjct: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
Query: 102 AWPGRQSQEGAGLPSHHGRPAGLLP 126
+ G Q Q+ AG P P G+ P
Sbjct: 1049 STAGPQQQQPAGAPQPGAVPPGVPP 1073
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 34.3 bits (77), Expect = 0.24
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 53 EYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAI---NPLHQPAPTGS--------QQQ 101
+ QPPP PP Q + + +A P + G A A A P AP GS Q
Sbjct: 958 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1017
Query: 102 AWPGRQSQEGAGLPSHHGRPAGLLP 126
+ G Q Q+ AG P P G+ P
Sbjct: 1018 STAGPQQQQPAGAPQPGAVPPGVPP 1042
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 34.3 bits (77), Expect = 0.24
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 53 EYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAI---NPLHQPAPTGS--------QQQ 101
+ QPPP PP Q + + +A P + G A A A P AP GS Q
Sbjct: 989 QQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAG 1048
Query: 102 AWPGRQSQEGAGLPSHHGRPAGLLP 126
+ G Q Q+ AG P P G+ P
Sbjct: 1049 STAGPQQQQPAGAPQPGAVPPGVPP 1073
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 33.9 bits (76), Expect = 0.31
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 42 PAPPLSHTGVAEYQPPP--YFPPPYQQLAYSQSA----DPYSHLGEAYAAAINPLHQPAP 95
P PP S VA PPP +PPP L S + P S LG A P P P
Sbjct: 323 PPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPP 382
Query: 96 TGSQQQAWPGRQSQEGAGLPSHHGRPAGLLPHL 128
G PG S +P+ G A LL +
Sbjct: 383 PGPPPP--PGLPSDGDHQVPTTAGNKAALLDQI 413
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 33.9 bits (76), Expect = 0.31
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 15 CEDRHDGSSNGNPRVPHLSSAGQHLYS-PAPPLSHTGVAE---YQPPPYFPPPYQQLAYS 70
C +RH+ G PR+P + Q + P P + G+ PPP PPP ++ +
Sbjct: 410 CGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHR 469
Query: 71 QSADPYSHLGEAYAAAINPLHQPAPTG 97
P LG P+ Q AP G
Sbjct: 470 AWPGPAQPLGNLRP----PVQQSAPGG 492
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 33.9 bits (76), Expect = 0.31
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 15 CEDRHDGSSNGNPRVPHLSSAGQHLYS-PAPPLSHTGVAE---YQPPPYFPPPYQQLAYS 70
C +RH+ G PR+P + Q + P P + G+ PPP PPP ++ +
Sbjct: 738 CGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHR 797
Query: 71 QSADPYSHLGEAYAAAINPLHQPAPTG 97
P LG P+ Q AP G
Sbjct: 798 AWPGPAQPLGNLRP----PVQQSAPGG 820
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 33.9 bits (76), Expect = 0.31
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 15 CEDRHDGSSNGNPRVPHLSSAGQHLYS-PAPPLSHTGVAE---YQPPPYFPPPYQQLAYS 70
C +RH+ G PR+P + Q + P P + G+ PPP PPP ++ +
Sbjct: 738 CGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHR 797
Query: 71 QSADPYSHLGEAYAAAINPLHQPAPTG 97
P LG P+ Q AP G
Sbjct: 798 AWPGPAQPLGNLRP----PVQQSAPGG 820
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 33.9 bits (76), Expect = 0.31
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 15 CEDRHDGSSNGNPRVPHLSSAGQHLYS-PAPPLSHTGVAE---YQPPPYFPPPYQQLAYS 70
C +RH+ G PR+P + Q + P P + G+ PPP PPP ++ +
Sbjct: 738 CGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHR 797
Query: 71 QSADPYSHLGEAYAAAINPLHQPAPTG 97
P LG P+ Q AP G
Sbjct: 798 AWPGPAQPLGNLRP----PVQQSAPGG 820
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 33.9 bits (76), Expect = 0.31
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 30 PHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINP 89
P S G HL PA + G + PPP PPP L + A + + P
Sbjct: 814 PSASKVGVHLLEPA---TRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRP 870
Query: 90 LHQPAPTGSQQ------QAWPGRQSQEGAGLPSHHGR-PAG 123
P G+ Q + P G G P+ G+ PAG
Sbjct: 871 EESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEGKDPAG 911
Score = 31.2 bits (69), Expect = 2.0
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 14/87 (16%)
Query: 52 AEYQPPPYFPPPYQQLAYSQSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEG 111
A QPPP PP + Y Y +G A +PL G + G
Sbjct: 296 ASAQPPPPPPPAHALQHYLSCGGSYPSMGHRANLACSPL-------------GGGEPSPG 342
Query: 112 AGLPSHHGRPAGLLPHLSGLEAGAVSA 138
AG PS G P+G SG G +A
Sbjct: 343 AGEPSKAG-PSGATAGASGRATGPEAA 368
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 33.5 bits (75), Expect = 0.40
Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 28 RVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLA-----------YSQSADPY 76
+ PH + Q PP + Y P PP Q A + QS PY
Sbjct: 492 QTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPY 551
Query: 77 SHLGEAYAAAINPLHQPAP-TGSQQQAWPGRQSQE 110
S QPAP T SQQ A+P QSQ+
Sbjct: 552 SQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQ 586
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.53
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 23/112 (20%)
Query: 22 SSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYF---PPPYQQLAYSQSADPYSH 78
SS+GN P L L S PPL G + PPP PPP + DP
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR--------DPPGR 375
Query: 79 LGEAYAAAINPLHQPAP---TGSQQQAWPGR-QSQEGAGLPSHHGRPAGLLP 126
G PL P P GS +A P Q +G+ S P LP
Sbjct: 376 SG--------PLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLP 419
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,713,314
Number of Sequences: 37866
Number of extensions: 1027051
Number of successful extensions: 4103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 3839
Number of HSP's gapped (non-prelim): 305
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.