TFAP2A 411

Name: TFAP2A	Sequence: fasta or formatted (433aa)		NCBI GI: 109389358
Description: transcription factor AP-2 alpha isoform c		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [437aa] transcription factor AP-2 alpha isoform a alt prot [431aa] transcription factor AP-2 alpha isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 29 2 C cysteine 1.4 6 1 D aspartate 4.8 21 1 E glutamate 4.6 20 2 F phenylalanine 2.3 10 1 G glycine 6.9 30 2 H histidine 4.6 20 1 I isoleucine 3.2 14 1 K lysine 5.1 22 2 L leucine 11.1 48 2 M methionine 1.2 5 1 N asparagine 6.2 27 2 P proline 9.5 41 3 Q glutamine 5.1 22 1 R arginine 5.3 23 2 S serine 9.2 40 2 T threonine 4.4 19 1 V valine 5.3 23 2 W tryptophan 0.5 2 1 Y tyrosine 2.5 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor AP-2 alpha isoform c TFAP2A 0.977 transcription factor AP-2 alpha isoform a TFAP2A 0.973 transcription factor AP-2 alpha isoform b TFAP2B 0.657 transcription factor AP-2 beta TFAP2C 0.558 transcription factor AP-2 gamma TFAP2E 0.527 transcription factor AP-2 epsilon (activating enhan... TFAP2D 0.379 transcription factor AP-2 beta-like 1 SEC16A 0.017 SEC16 homolog A NIPBL 0.016 delangin isoform B NIPBL 0.016 delangin isoform A VPS37C 0.016 vacuolar protein sorting 37C SSBP3 0.016 single stranded DNA binding protein 3 isoform b [Hom... ARID1A 0.015 AT rich interactive domain 1A isoform a ARID1A 0.015 AT rich interactive domain 1A isoform b MLL2 0.015 myeloid/lymphoid or mixed-lineage leukemia 2 GRINA 0.014 glutamate receptor, ionotropic, N-methyl D-aspartate... GRINA 0.014 glutamate receptor, ionotropic, N-methyl D-aspartate... RERE 0.014 atrophin-1 like protein isoform b RERE 0.014 atrophin-1 like protein isoform a RERE 0.014 atrophin-1 like protein isoform a CHERP 0.014 calcium homeostasis endoplasmic reticulum protein [... R3HDM2 0.014 R3H domain containing 2 BRD4 0.013 bromodomain-containing protein 4 isoform long RBM33 0.013 RNA binding motif protein 33 RFX1 0.012 regulatory factor X1 LOC100287742 0.012 PREDICTED: hypothetical protein XP_002343595 LOC100129365 0.012 PREDICTED: hypothetical protein LOC100292058 0.012 PREDICTED: hypothetical protein XP_002344766 LOC100290367 0.012 PREDICTED: hypothetical protein XP_002347417 LOC100288730 0.012 PREDICTED: hypothetical protein XP_002343287 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.