Guide to the Human Genome
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Name: RPLP2 Sequence: fasta or formatted (115aa) NCBI GI: 4506671
Description:

ribosomal protein P2

Referenced in:

Ribosomes
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            17.4         20           3
 C cysteine            0.0          0           0
 D aspartate           9.6         11           3
 E glutamate           8.7         10           2
 F phenylalanine       1.7          2           1
 G glycine            10.4         12           2
 H histidine           0.0          0           0
 I isoleucine          6.1          7           1
 K lysine              8.7         10           2
 L leucine             7.0          8           2
 M methionine          1.7          2           1
 N asparagine          3.5          4           1
 P proline             4.3          5           1
 Q glutamine           0.9          1           1
 R arginine            1.7          2           1
 S serine             10.4         12           2
 T threonine           0.0          0           0
 V valine              6.1          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein P2 
RPLP1                 0.194   ribosomal protein P1 isoform 1 
RPLP1                 0.189   ribosomal protein P1 isoform 2 
RPLP0                 0.148   ribosomal protein P0 
RPLP0                 0.148   ribosomal protein P0 
LOC100293508          0.133   PREDICTED: hypothetical protein 
LOC100290313          0.133   PREDICTED: hypothetical protein XP_002347460 
LOC100289389          0.133   PREDICTED: hypothetical protein XP_002343314 
PRG2                  0.071   plasticity-related protein 2 
NCL                   0.051   nucleolin 
BASP1                 0.051   brain abundant, membrane attached signal protein 1 [...
CSRNP3                0.041   cysteine-serine-rich nuclear protein 3 
FAM9A                 0.041   family with sequence similarity 9, member A 
LOC389813             0.041   similar to CG15216-PA 
TACC2                 0.036   transforming, acidic coiled-coil containing protein...
MAPK8IP2              0.036   mitogen-activated protein kinase 8 interacting protei...
MAPK8IP2              0.036   mitogen-activated protein kinase 8 interacting protei...
HNRNPUL2              0.036   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
SOX4                  0.031   SRY (sex determining region Y)-box 4 
CASZ1                 0.031   castor homolog 1, zinc finger isoform a 
GTPBP10               0.031   GTP-binding protein 10 isoform 2 
SAMD1                 0.031   sterile alpha motif domain containing 1 
DEAF1                 0.031   deformed epidermal autoregulatory factor 1 
HOXA7                 0.031   homeobox A7 
LOC100294411          0.031   PREDICTED: similar to deformed epidermal autoregula...
SCAF1                 0.031   SR-related CTD-associated factor 1 
ZNF236                0.031   zinc finger protein 236 
ZNF367                0.031   zinc finger protein 367 
FASTKD5               0.031   FAST kinase domains 5 
SRRM1                 0.031   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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