Guide to the Human Genome
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Name: FASTKD5 Sequence: fasta or formatted (764aa) NCBI GI: 11141903
Description:

FAST kinase domains 5

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         44           2
 C cysteine            2.2         17           2
 D aspartate           3.5         27           2
 E glutamate           6.4         49           2
 F phenylalanine       4.6         35           2
 G glycine             5.1         39           2
 H histidine           3.5         27           2
 I isoleucine          3.8         29           1
 K lysine              5.6         43           2
 L leucine            14.4        110           3
 M methionine          2.9         22           1
 N asparagine          4.3         33           2
 P proline             4.5         34           2
 Q glutamine           4.6         35           2
 R arginine            5.1         39           2
 S serine              8.5         65           3
 T threonine           4.2         32           2
 V valine              6.9         53           2
 W tryptophan          1.0          8           1
 Y tyrosine            3.0         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FAST kinase domains 5 
FASTKD1               0.030   FAST kinase domains 1 
FASTKD3               0.029   FAST kinase domains 3 
FASTKD2               0.021   FAST kinase domains 2 
FASTKD2               0.021   FAST kinase domains 2 
FASTKD2               0.021   FAST kinase domains 2 
TBRG4                 0.017   cell cycle progression 2 protein isoform 1 
FASTK                 0.017   Fas-activated serine/threonine kinase isoform 1 [Homo...
FASTK                 0.017   Fas-activated serine/threonine kinase isoform 4 [Hom...
TBRG4                 0.008   cell cycle progression 2 protein isoform 2 
TBRG4                 0.008   cell cycle progression 2 protein isoform 2 
KDM5B                 0.005   jumonji, AT rich interactive domain 1B 
ZFHX4                 0.005   zinc finger homeodomain 4 
PDGFRB                0.004   platelet-derived growth factor receptor beta precurso...
RPLP2                 0.004   ribosomal protein P2 
MYO5B                 0.003   myosin VB 
SCAND3                0.003   SCAN domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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