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Search of human proteins with 4506365
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 429 e-120
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 364 e-101
gi|254281345 RAB2B protein isoform 2 [Homo sapiens] 273 1e-73
gi|19923483 GTPase Rab14 [Homo sapiens] 250 7e-67
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 220 8e-58
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 214 6e-56
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 194 5e-50
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 190 7e-49
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 188 3e-48
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 187 4e-48
gi|16933567 mel transforming oncogene [Homo sapiens] 186 2e-47
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 184 4e-47
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 183 8e-47
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 182 1e-46
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens] 182 2e-46
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 182 2e-46
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 182 2e-46
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 182 2e-46
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 179 2e-45
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 178 3e-45
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 176 1e-44
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 174 5e-44
gi|116812567 RAB25 [Homo sapiens] 174 6e-44
gi|50234889 RAB43 protein [Homo sapiens] 171 4e-43
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 167 8e-42
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 166 1e-41
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 166 2e-41
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 156 1e-38
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 156 1e-38
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 156 1e-38
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 429 bits (1102), Expect = e-120
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 EANGIKIGPQHAATNATHAGNQGGQQAGGGCC 212
EANGIKIGPQHAATNATHAGNQGGQQAGGGCC
Sbjct: 181 EANGIKIGPQHAATNATHAGNQGGQQAGGGCC 212
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 364 bits (934), Expect = e-101
Identities = 182/218 (83%), Positives = 196/218 (89%), Gaps = 8/218 (3%)
Query: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
M YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDGKQIKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLT+WLEDARQHS+SNMVIMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
SDLESRR+VK+EEGEAFAREHGLIFMETSAKTA NVEEAFINTAKEIY KIQ+G+FD++N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 EANGIKIGPQHAATNATHAGNQGGQQ------AGGGCC 212
EANGIKIGPQ + +T G Q+ + GCC
Sbjct: 181 EANGIKIGPQQSI--STSVGPSASQRNSRDIGSNSGCC 216
>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
Length = 170
Score = 273 bits (697), Expect = 1e-73
Identities = 137/172 (79%), Positives = 151/172 (87%), Gaps = 8/172 (4%)
Query: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
M+ IDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLT+WLEDARQ
Sbjct: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
Query: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
HS+SNMVIMLIGNKSDLESRR+VK+EEGEAFAREHGLIFMETSAKTA NVEEAFINTAKE
Sbjct: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
Query: 167 IYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQ------AGGGCC 212
IY KIQ+G+FD++NEANGIKIGPQ + +T G Q+ + GCC
Sbjct: 121 IYRKIQQGLFDVHNEANGIKIGPQQSI--STSVGPSASQRNSRDIGSNSGCC 170
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 250 bits (638), Expect = 7e-67
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 1/209 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + G++IKLQIWDT
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL DAR +N N VI+LIGNK+D
Sbjct: 68 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
LE++R+V EE + FA E+GL+F+E SAKT NVE+AF+ AK+IY+ IQ+G D+N
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
Query: 183 NGIKIGPQHAATNATHAGNQGGQQAGGGC 211
+G++ P A Q+ G GC
Sbjct: 188 SGVQHKPS-APQGGRLTSEPQPQREGCGC 215
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 220 bits (560), Expect = 8e-58
Identities = 107/186 (57%), Positives = 140/186 (75%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + GK +KLQIWDT
Sbjct: 10 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FRS+TRSYYRGAAGALLVYDIT R+T+N LT WL DAR ++ N+VI+L GNK D
Sbjct: 70 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKD 129
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
L++ REV E FA+E+ L+F+ETSA T NVEEAF+ A++I KI+ G D
Sbjct: 130 LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMG 189
Query: 183 NGIKIG 188
+GI+ G
Sbjct: 190 SGIQYG 195
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 214 bits (544), Expect = 6e-56
Identities = 104/186 (55%), Positives = 134/186 (72%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + GK +KLQIWDT
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FRS+TRSYYRGAAGALLVYDIT R+T+N L WL DAR ++ N+V++L GNK D
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKD 124
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
L+ REV E FA+E+ L+F+ETSA T NVEEAF+ A+ I KI G D
Sbjct: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 184
Query: 183 NGIKIG 188
+GI+ G
Sbjct: 185 SGIQYG 190
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 194 bits (493), Expect = 5e-50
Identities = 89/182 (48%), Positives = 131/182 (71%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGK+CLL +F++ F TIG++F R I +DGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR+IT +YYRGA G +LVYDIT +F+++ W+ + +H++S++ M++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
+ +R+V KE GE A ++G+ F+ETSAK+++NVEEAF A++I K+ + D N+
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAG 184
Query: 183 NG 184
G
Sbjct: 185 AG 186
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 190 bits (483), Expect = 7e-49
Identities = 95/171 (55%), Positives = 121/171 (70%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +DGK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R H++SN+VIML+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
L R V +E AFA ++ L F+ETSA ++NVEEAF N EIY + +
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 188 bits (477), Expect = 3e-48
Identities = 94/171 (54%), Positives = 120/171 (70%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +DGK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R H++SN+VIML+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
L R V +E AFA ++GL F+ETSA ++NVE AF EIY + +
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 178
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 187 bits (476), Expect = 4e-48
Identities = 95/210 (45%), Positives = 138/210 (65%), Gaps = 12/210 (5%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R I +DGK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL++ ++++ N+ +L+GNK D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
L +++ V + FA G+ F+ETSAK A+NVE++F+ A EI +++ G E
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 NGIKIGPQHAATNATHAGNQGGQQAGGGCC 212
+ +KI +Q+GGGCC
Sbjct: 188 SNVKIQSTPV------------KQSGGGCC 205
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 186 bits (471), Expect = 2e-47
Identities = 88/189 (46%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +DGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR+IT +YYRGA G +LVYDIT +F+++ W+ + +H+++++ M++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
+ +R+V KE GE A ++G+ FMETSAK NVE AF A++I K+ + + + +
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 184
Query: 183 N--GIKIGP 189
+ G+KI P
Sbjct: 185 SNQGVKITP 193
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 184 bits (468), Expect = 4e-47
Identities = 81/169 (47%), Positives = 129/169 (76%)
Query: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
AY +LFK ++IGD+GVGK+CL+++F + F + TIG++F R + I+GK+IKLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
TAGQE F++IT +YYRGA G +LVYDIT +F ++ W++ ++++++ + +L+GNK
Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKC 123
Query: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
D+E++R+V+KE+ + AREHG+ F ETSAK++ NV+EAF + A++I K
Sbjct: 124 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 183 bits (465), Expect = 8e-47
Identities = 95/210 (45%), Positives = 136/210 (64%), Gaps = 13/210 (6%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R I +DGK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR+IT SYYRGA G ++VYD+T ++++ ++ WL++ ++++ N+ +L+GNKSD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
L +++ V + FA G+ F+ETSAK A+NVE+AF+ A EI +++ G E
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAAS-GGER 183
Query: 183 NGIKIGPQHAATNATHAGNQGGQQAGGGCC 212
+KI + AGGGCC
Sbjct: 184 PNLKIDSTPV------------KPAGGGCC 201
>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
Length = 213
Score = 182 bits (463), Expect = 1e-46
Identities = 89/188 (47%), Positives = 133/188 (70%), Gaps = 2/188 (1%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKLQIWD 61
+ Y F+ I+IGD+ VGKSCL+ +FT+ RF V D T+GV+F +R++ I+ GK+IKLQIWD
Sbjct: 5 WLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNS-NMVIMLIGNK 120
TAGQE FRSITR+YYR + G LL++DIT R +F ++ WLE+ + H +V +L+G+K
Sbjct: 65 TAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHK 124
Query: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
DL+++R+V + E E A +G+ ++ETSA+ A NVE+AF + ++IYE ++ G I
Sbjct: 125 CDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
Query: 181 EANGIKIG 188
G+K G
Sbjct: 185 GWEGVKSG 192
>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 182 bits (462), Expect = 2e-46
Identities = 94/192 (48%), Positives = 134/192 (69%), Gaps = 6/192 (3%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMITID-GKQIKL 57
+ Y F+ I+IGD+ VGKSCLL +FT RF P D T+GV+F +R++ I+ GK+IKL
Sbjct: 5 WIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKL 64
Query: 58 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNS-NMVIML 116
Q+WDTAGQE FRSITRSYYR + G LV+DIT R +F H+ WLE+A+ + +V +L
Sbjct: 65 QLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRIVFLL 124
Query: 117 IGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
+G+K DL S+R+V +EE E + + G+ ++ETSAK A+NVEE+F ++IYE I++G
Sbjct: 125 VGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIKKGEI 184
Query: 177 DINNEANGIKIG 188
I + G+K G
Sbjct: 185 CIQDGWEGVKSG 196
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 182 bits (461), Expect = 2e-46
Identities = 80/169 (47%), Positives = 127/169 (75%)
Query: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
AY +LFK ++IGD+GVGK+CL+++F + F + TIG++F R + I+GK+IKLQ+WD
Sbjct: 128 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
TAGQE F++IT +YYRGA G +L YDIT +F ++ W++ +++++ + +L+GNK
Sbjct: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
Query: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
D+E++R+V+KE+ + AREHG+ F ETSAK++ NV+EAF + A++I K
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 182 bits (461), Expect = 2e-46
Identities = 80/169 (47%), Positives = 127/169 (75%)
Query: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
AY +LFK ++IGD+GVGK+CL+++F + F + TIG++F R + I+GK+IKLQ+WD
Sbjct: 128 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
TAGQE F++IT +YYRGA G +L YDIT +F ++ W++ +++++ + +L+GNK
Sbjct: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
Query: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
D+E++R+V+KE+ + AREHG+ F ETSAK++ NV+EAF + A++I K
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 182 bits (461), Expect = 2e-46
Identities = 80/169 (47%), Positives = 127/169 (75%)
Query: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
AY +LFK ++IGD+GVGK+CL+++F + F + TIG++F R + I+GK+IKLQ+WD
Sbjct: 128 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 187
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
TAGQE F++IT +YYRGA G +L YDIT +F ++ W++ +++++ + +L+GNK
Sbjct: 188 TAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKC 247
Query: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
D+E++R+V+KE+ + AREHG+ F ETSAK++ NV+EAF + A++I K
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 179 bits (453), Expect = 2e-45
Identities = 98/207 (47%), Positives = 133/207 (64%), Gaps = 16/207 (7%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
K +IIG++GVGKS LLL+FTD F P TIGV+F + I++DG + KL IWDTAGQE
Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
Query: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVI-MLIGNKSDLESR 126
FR++T SYYRGA G +LVYD+TRRDTF L WL + + N ++ ML+GNK D E+
Sbjct: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN- 128
Query: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE--GVFDINNEANG 184
REV + EG FAR+H ++F+E SAKT V+ AF +E+ EKI + G+++ N+ G
Sbjct: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EELVEKIIQTPGLWESENQNKG 184
Query: 185 IKIGPQHAATNATHAGNQGGQQAGGGC 211
+K+ + QGG GG C
Sbjct: 185 VKLSHREE--------GQGGGACGGYC 203
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 178 bits (452), Expect = 3e-45
Identities = 83/168 (49%), Positives = 118/168 (70%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + + + GK+IKLQIWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE F +IT SYYRGA G +LVYDIT +F +++ WL + +H+N ++ ML+GNK D
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
++ +R V K +G AREHG+ F ETSAK N+E+AF+ A++I K
Sbjct: 126 MDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 176 bits (447), Expect = 1e-44
Identities = 81/167 (48%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Query: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF-QPVHDLTIGVEFGARMITIDGKQIKLQIW 60
+Y K +++GDTGVGK+C L+QF D F T+G++F +++T+DG ++KLQIW
Sbjct: 25 SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
DTAGQE FRS+T +YYR A LL+YDIT + +F+++ WL + +++ ++VIML+GNK
Sbjct: 85 DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
+D+ S R ++ E+GE ARE+G+ F+ETSAKT NVE AF+ AKE+
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 174 bits (441), Expect = 5e-44
Identities = 81/163 (49%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQP-VHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
L K I++GD+GVGK+ LL+QF +F P T+G+ F +++T+DG ++KLQIWDTAG
Sbjct: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
QE FRS+T +YYR A LL+YDIT + +F+++ WL + +++ ++VIML+GNK+D+
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
Query: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
S R ++ E+GE ARE+G+ F+ETSAKT NVE AF+ AKE+
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 174 bits (440), Expect = 6e-44
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 18/215 (8%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y ++FK ++IG++GVGK+ LL +FT F TIGVEF R + + +K QIWDT
Sbjct: 9 YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AG E +R+IT +YYRGA GALLV+D+T+ T+ + WL++ H+ + +V+ML+GNKSD
Sbjct: 69 AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 128
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
L REV EE FA +GL+F+ETSA ++NVE AF KEI+ K+ +
Sbjct: 129 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK------QRQ 182
Query: 183 NGIKIGPQHAATNATHAGN-QGGQQAGGG----CC 212
N I+ TNA G+ Q GQ+ G G CC
Sbjct: 183 NSIR-------TNAITLGSAQAGQEPGPGEKRACC 210
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 171 bits (433), Expect = 4e-43
Identities = 83/166 (50%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y +LFK +++GD VGK+C++ +F F TIGV+F + + I GK++KLQIWDT
Sbjct: 15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR+IT+SYYR A GA+L YDIT+R +F + W+ED R+++ SN+V +LIGNKSD
Sbjct: 75 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134
Query: 123 LESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEI 167
L REV E ++ A + ++ +ETSAK +SNVEEAF+ A E+
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 167 bits (422), Expect = 8e-42
Identities = 78/178 (43%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y +LFK ++IG+ GVGK+CL+ +FT F P TIGV+F + + I+G+++KLQIWDT
Sbjct: 6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FRSIT+SYYR A +L YDIT ++F L WL + Q++++ ++ +L+GNK D
Sbjct: 66 AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 125
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
L RREV ++ E F+ + ++ETSAK + NVE+ F++ A + + ++ +NN
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL-VNN 182
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 166 bits (420), Expect = 1e-41
Identities = 79/166 (47%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
+ YLFK I+IGD+ VGK+C++ F + TIGV+F R + IDGK++K+Q+WDT
Sbjct: 14 FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR+IT+SYYR A A++ YD+TRR TF + W+ + ++ +N+VIMLIGNK D
Sbjct: 74 AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
Query: 123 LESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEI 167
L +R V E+ A ++GL+ +ETSAK + N+EE F+ AKE+
Sbjct: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 166 bits (419), Expect = 2e-41
Identities = 77/169 (45%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMITIDGKQIKLQIWD 61
Y FK +++GD+GVGK+CLL++F D F + T+G++F +++ +DG ++KLQ+WD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
TAGQE FRS+T +YYR A LL+YD+T + +F+++ WL + +++ ++ +ML+GNK
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179
Query: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
D R VK+E+GE A+E+GL FMETSAKT NV+ AF AKE+ ++
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 228
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 156 bits (395), Expect = 1e-38
Identities = 78/188 (41%), Positives = 111/188 (59%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
+ Y+FK +IIG++ VGK+ L ++ D F P T+G++F + I + K+IKLQIWDT
Sbjct: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE +R+IT +YYRGA G +L+YDIT ++FN + W + +S N ++L+GNK D
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
Query: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
+E R V E G A G F E SAK NV++ F I EK+ E + +
Sbjct: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAV 198
Query: 183 NGIKIGPQ 190
G K GPQ
Sbjct: 199 TGAKQGPQ 206
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 156 bits (394), Expect = 1e-38
Identities = 75/195 (38%), Positives = 120/195 (61%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
FK +++G++ VGKS L+L+F +F + TIG F + + +D +K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
+ S+ YYRGA A++VYDIT DTF W+++ ++ ++ N+VI L GNK+DL S+
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIK 186
R V+ +E +A+A ++ L+FMETSAKTA NV E F+ AK++ + + G+
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVD 201
Query: 187 IGPQHAATNATHAGN 201
+ + A+ + N
Sbjct: 202 LQENNPASRSQCCSN 216
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 156 bits (394), Expect = 1e-38
Identities = 75/195 (38%), Positives = 120/195 (61%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
FK +++G++ VGKS L+L+F +F + TIG F + + +D +K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
+ S+ YYRGA A++VYDIT DTF W+++ ++ ++ N+VI L GNK+DL S+
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIK 186
R V+ +E +A+A ++ L+FMETSAKTA NV E F+ AK++ + + G+
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVD 201
Query: 187 IGPQHAATNATHAGN 201
+ + A+ + N
Sbjct: 202 LQENNPASRSQCCSN 216
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,125,642
Number of Sequences: 37866
Number of extensions: 268230
Number of successful extensions: 1260
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 262
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.