RAB5C 27831

Name: RAB5C	Sequence: fasta or formatted (216aa)		NCBI GI: 41393614
Description: RAB5C, member RAS oncogene family isoform a		Referenced in: Rab
Other entries for this name: alt mRNA [216aa] RAB5C, member RAS oncogene family isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.4 31 2 C cysteine 1.9 4 2 D aspartate 4.2 9 2 E glutamate 5.6 12 1 F phenylalanine 4.2 9 1 G glycine 6.9 15 2 H histidine 0.9 2 1 I isoleucine 4.2 9 1 K lysine 6.0 13 2 L leucine 6.9 15 2 M methionine 2.3 5 1 N asparagine 6.9 15 2 P proline 3.7 8 1 Q glutamine 6.0 13 1 R arginine 5.1 11 1 S serine 5.6 12 2 T threonine 5.6 12 2 V valine 6.0 13 2 W tryptophan 0.9 2 1 Y tyrosine 2.8 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAB5C, member RAS oncogene family isoform a RAB5C 1.000 RAB5C, member RAS oncogene family isoform b RAB5A 0.853 RAB5A, member RAS oncogene family RAB5B 0.830 RAB5B, member RAS oncogene family RAB22A 0.400 RAS-related protein RAB-22A RAB31 0.383 RAB31, member RAS oncogene family RAB17 0.371 RAB17, member RAS oncogene family RAB21 0.356 RAB21, member RAS oncogene family RAB6B 0.354 RAB6B, member RAS oncogene family RAB6A 0.346 RAB6A, member RAS oncogene family isoform a RAB1A 0.344 RAB1A, member RAS oncogene family isoform 1 RAB6A 0.342 RAB6A, member RAS oncogene family isoform b RAB1B 0.342 RAB1B, member RAS oncogene family RAB11B 0.332 RAB11B, member RAS oncogene family RAB11A 0.324 Ras-related protein Rab-11A RAB25 0.324 RAB25 RAB2A 0.322 RAB2A, member RAS oncogene family RAB2B 0.319 RAB2B protein isoform 1 LOC150786 0.307 RAB6C-like RAB13 0.307 RAB13, member RAS oncogene family RAB6C 0.305 RAB6C, member RAS oncogene family RAB37 0.302 RAB37, member RAS oncogene family isoform 3 RAB14 0.302 GTPase Rab14 LOC100131294 0.300 PREDICTED: similar to RAB13, member RAS oncogene fa... LOC100131294 0.300 PREDICTED: similar to hCG24991 LOC100131294 0.300 PREDICTED: similar to hCG24991 RAB41 0.300 RAB41, member RAS oncogene family RAB19 0.297 RAB19, member RAS oncogene family RAB8B 0.297 RAB8B, member RAS oncogene family RAB4B 0.297 ras-related GTP-binding protein 4b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.