Guide to the Human Genome
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Name: RAB26 Sequence: fasta or formatted (256aa) NCBI GI: 46361978
Description:

RAB26, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         27           2
 C cysteine            1.2          3           2
 D aspartate           6.6         17           1
 E glutamate           4.3         11           1
 F phenylalanine       4.3         11           1
 G glycine             9.0         23           3
 H histidine           2.3          6           1
 I isoleucine          2.0          5           1
 K lysine              7.8         20           2
 L leucine             9.4         24           4
 M methionine          2.3          6           1
 N asparagine          2.7          7           1
 P proline             5.5         14           2
 Q glutamine           2.3          6           1
 R arginine            6.6         17           1
 S serine              6.2         16           1
 T threonine           5.9         15           1
 V valine              7.4         19           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.7          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB26, member RAS oncogene family 
RAB37                 0.565   RAB37, member RAS oncogene family isoform 2 
RAB37                 0.526   RAB37, member RAS oncogene family isoform 3 
RAB8A                 0.360   mel transforming oncogene 
RAB8B                 0.354   RAB8B, member RAS oncogene family 
RAB10                 0.343   ras-related GTP-binding protein RAB10 
LOC100131294          0.337   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.337   PREDICTED: similar to hCG24991 
LOC100131294          0.337   PREDICTED: similar to hCG24991 
RAB13                 0.337   RAB13, member RAS oncogene family 
RAB1B                 0.323   RAB1B, member RAS oncogene family 
RAB1A                 0.321   RAB1A, member RAS oncogene family isoform 1 
RAB19                 0.291   RAB19, member RAS oncogene family 
RAB2B                 0.289   RAB2B protein isoform 1 
RAB35                 0.289   RAB35, member RAS oncogene family 
RAB2A                 0.287   RAB2A, member RAS oncogene family 
RAB43                 0.276   RAB43 protein 
RAB30                 0.276   RAB30, member RAS oncogene family 
RAB14                 0.268   GTPase Rab14 
RAB12                 0.268   RAB12, member RAS oncogene family 
RAB3C                 0.264   RAB3C, member RAS oncogene family 
RAB11A                0.264   Ras-related protein Rab-11A 
RAB3D                 0.264   RAB3D, member RAS oncogene family 
RAB3A                 0.262   RAB3A, member RAS oncogene family 
RAB39B                0.262   RAB39B, member RAS oncogene family 
RAB3B                 0.260   RAB3B, member RAS oncogene family 
RAB11B                0.256   RAB11B, member RAS oncogene family 
RAB39                 0.250   RAB39, member RAS oncogene family 
RAB27A                0.246   Ras-related protein Rab-27A 
RAB27A                0.246   Ras-related protein Rab-27A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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