PSMD12 29253

Name: PSMD12	Sequence: fasta or formatted (456aa)		NCBI GI: 4506221
Description: proteasome 26S non-ATPase subunit 12 isoform 1		Referenced in: Proteasome Signalosome
Other entries for this name: alt prot [436aa] proteasome 26S non-ATPase subunit 12 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 26 2 C cysteine 1.5 7 2 D aspartate 5.3 24 1 E glutamate 9.6 44 2 F phenylalanine 2.0 9 2 G glycine 3.1 14 2 H histidine 1.3 6 1 I isoleucine 6.8 31 2 K lysine 9.4 43 2 L leucine 11.8 54 2 M methionine 3.9 18 1 N asparagine 3.9 18 2 P proline 1.8 8 1 Q glutamine 5.0 23 2 R arginine 5.7 26 2 S serine 5.9 27 1 T threonine 5.9 27 2 V valine 6.6 30 2 W tryptophan 1.1 5 1 Y tyrosine 3.5 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 12 isoform 1 PSMD12 0.945 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... COPS4 0.068 COP9 signalosome subunit 4 COPS2 0.018 COP9 constitutive photomorphogenic homolog subunit ... COPS2 0.018 COP9 constitutive photomorphogenic homolog subunit 2 ... CGNL1 0.014 cingulin-like 1 MYH9 0.014 myosin, heavy polypeptide 9, non-muscle GCC1 0.014 Golgi coiled-coil protein 1 KIAA1598 0.013 shootin1 isoform a KIAA1598 0.013 shootin1 isoform b CEP110 0.013 centrosomal protein 110kDa MYH6 0.013 myosin heavy chain 6 GOLGB1 0.013 golgi autoantigen, golgin subfamily b, macrogolgin ... FYCO1 0.012 FYVE and coiled-coil domain containing 1 CCDC136 0.012 coiled-coil domain containing 136 MYH7 0.010 myosin, heavy chain 7, cardiac muscle, beta CCDC46 0.010 coiled-coil domain containing 46 isoform a C14orf145 0.009 hypothetical protein LOC145508 BICD2 0.009 bicaudal D homolog 2 isoform 1 BICD2 0.009 bicaudal D homolog 2 isoform 2 CCDC68 0.009 coiled-coil domain containing 68 CCDC68 0.009 coiled-coil domain containing 68 NUMA1 0.009 nuclear mitotic apparatus protein 1 UBR7 0.009 ubiquitin protein ligase E3 component n-recognin 7 ... UBR7 0.009 ubiquitin protein ligase E3 component n-recognin 7 ... COPS3 0.009 COP9 constitutive photomorphogenic homolog subunit 3... CCDC46 0.009 coiled-coil domain containing 46 isoform b MYH8 0.009 myosin, heavy chain 8, skeletal muscle, perinatal [... PSMD6 0.008 proteasome (prosome, macropain) 26S subunit, non-ATPa... PPL 0.008 periplakin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.