CCDC46 36410

Name: CCDC46	Sequence: fasta or formatted (211aa)		NCBI GI: 82880654
Description: coiled-coil domain containing 46 isoform b		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [955aa] coiled-coil domain containing 46 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 13 2 C cysteine 0.5 1 1 D aspartate 3.8 8 1 E glutamate 12.3 26 2 F phenylalanine 0.9 2 1 G glycine 2.4 5 1 H histidine 0.9 2 1 I isoleucine 5.2 11 2 K lysine 11.4 24 2 L leucine 12.3 26 1 M methionine 1.4 3 1 N asparagine 4.7 10 1 P proline 1.9 4 1 Q glutamine 11.4 24 3 R arginine 6.6 14 2 S serine 8.5 18 2 T threonine 4.7 10 2 V valine 2.4 5 1 W tryptophan 0.5 1 1 Y tyrosine 1.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 46 isoform b CCDC46 0.728 coiled-coil domain containing 46 isoform a GCOM1 0.077 GRINL1A combined protein isoform 8 GCOM1 0.074 GRINL1A combined protein isoform 2 GCOM1 0.074 GRINL1A combined protein isoform 1 GCOM1 0.074 GRINL1A upstream protein isoform 7 LOC727909 0.071 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.071 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.071 PREDICTED: similar to Golgin subfamily A member 8-l... TNIP1 0.071 TNFAIP3 interacting protein 1 LOC653073 0.069 PREDICTED: Golgin subfamily A member 8-like protein... EPS15 0.066 epidermal growth factor receptor pathway substrate 15... LOC643699 0.066 PREDICTED: similar to golgi autoantigen, golgin sub... LOC653125 0.066 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.066 PREDICTED: Golgin subfamily A member 8-like protein... LOC653720 0.063 PREDICTED: similar to Golgin subfamily A member 8-l... DST 0.061 dystonin isoform 1e precursor PLEC1 0.061 plectin 1 isoform 11 PLEC1 0.061 plectin 1 isoform 10 PLEC1 0.061 plectin 1 isoform 8 PLEC1 0.061 plectin 1 isoform 7 PLEC1 0.061 plectin 1 isoform 6 PLEC1 0.061 plectin 1 isoform 3 PLEC1 0.061 plectin 1 isoform 2 PLEC1 0.061 plectin 1 isoform 1 EPS15L1 0.061 epidermal growth factor receptor pathway substrate 1... GRIPAP1 0.061 GRIP1 associated protein 1 isoform 1 MYH11 0.058 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.058 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.058 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.