PSMD12 24878

Name: PSMD12	Sequence: fasta or formatted (436aa)		NCBI GI: 28872765
Description: proteasome 26S non-ATPase subunit 12 isoform 2		Referenced in: Proteasome Signalosome
Other entries for this name: alt prot [456aa] proteasome 26S non-ATPase subunit 12 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 26 2 C cysteine 1.6 7 2 D aspartate 5.5 24 1 E glutamate 9.2 40 2 F phenylalanine 2.1 9 2 G glycine 3.0 13 2 H histidine 1.4 6 1 I isoleucine 6.9 30 2 K lysine 9.6 42 2 L leucine 11.5 50 2 M methionine 4.1 18 1 N asparagine 4.1 18 2 P proline 1.8 8 1 Q glutamine 4.8 21 2 R arginine 5.5 24 2 S serine 6.0 26 1 T threonine 5.5 24 2 V valine 6.7 29 2 W tryptophan 1.1 5 1 Y tyrosine 3.7 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... PSMD12 0.986 proteasome 26S non-ATPase subunit 12 isoform 1 COPS4 0.071 COP9 signalosome subunit 4 COPS2 0.019 COP9 constitutive photomorphogenic homolog subunit ... COPS2 0.019 COP9 constitutive photomorphogenic homolog subunit 2 ... GCC1 0.014 Golgi coiled-coil protein 1 BICD2 0.013 bicaudal D homolog 2 isoform 1 BICD2 0.013 bicaudal D homolog 2 isoform 2 MYH6 0.013 myosin heavy chain 6 FYCO1 0.012 FYVE and coiled-coil domain containing 1 CCDC136 0.012 coiled-coil domain containing 136 GOLGB1 0.012 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH7 0.011 myosin, heavy chain 7, cardiac muscle, beta KIAA1598 0.011 shootin1 isoform a KIAA1598 0.011 shootin1 isoform b MYH9 0.010 myosin, heavy polypeptide 9, non-muscle C14orf145 0.010 hypothetical protein LOC145508 UBR7 0.010 ubiquitin protein ligase E3 component n-recognin 7 ... UBR7 0.010 ubiquitin protein ligase E3 component n-recognin 7 ... COPS3 0.010 COP9 constitutive photomorphogenic homolog subunit 3... MYH8 0.010 myosin, heavy chain 8, skeletal muscle, perinatal [... PSMD6 0.008 proteasome (prosome, macropain) 26S subunit, non-ATPa... CCDC68 0.008 coiled-coil domain containing 68 CCDC68 0.008 coiled-coil domain containing 68 KTN1 0.008 kinectin 1 isoform b EIF3M 0.008 eukaryotic translation initiation factor 3, subunit ... SMC4 0.008 SMC4 structural maintenance of chromosomes 4-like 1 ... STXBP4 0.008 syntaxin binding protein 4 SMC4 0.008 SMC4 structural maintenance of chromosomes 4-like 1 ... SDCCAG8 0.007 serologically defined colon cancer antigen 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.