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Search of human proteins with 4505853
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505853 phospholipase A2, group V precursor [Homo sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505853 phospholipase A2, group V precursor [Homo sapiens] 317 3e-87
gi|6912596 phospholipase A2, group IID [Homo sapiens] 136 6e-33
gi|239915991 phospholipase A2, group IIA precursor [Homo sapiens] 134 2e-32
gi|239915987 phospholipase A2, group IIA precursor [Homo sapiens] 134 2e-32
gi|239915985 phospholipase A2, group IIA precursor [Homo sapiens] 134 2e-32
gi|4505849 phospholipase A2, group IIA precursor [Homo sapiens] 134 2e-32
gi|7657461 phospholipase A2, group IIE [Homo sapiens] 126 6e-30
gi|145553989 phospholipase A2, group IIF [Homo sapiens] 108 1e-24
gi|4505845 phospholipase A2, group X [Homo sapiens] 98 2e-21
gi|157743243 phospholipase A2, group IIC [Homo sapiens] 76 1e-14
gi|4505847 phospholipase A2 group IB [Homo sapiens] 72 1e-13
gi|223029412 otoconin 90 [Homo sapiens] 59 1e-09
gi|239751105 PREDICTED: hypothetical protein XP_002347705 [Homo ... 38 0.002
gi|239745592 PREDICTED: hypothetical protein XP_002344154 [Homo ... 35 0.015
gi|56237021 fibrillin 3 precursor [Homo sapiens] 30 0.49
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 30 0.63
gi|194306650 SET domain and mariner transposase fusion [Homo sap... 30 0.63
gi|7019381 fibronectin leucine rich transmembrane protein 2 [Hom... 28 2.4
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens] 28 3.1
gi|142976884 phospholipase A2, group III precursor [Homo sapiens] 28 3.1
gi|21389577 hypothetical protein LOC146705 [Homo sapiens] 28 3.1
gi|14150132 hypothetical protein LOC84302 [Homo sapiens] 27 5.4
gi|22749177 hypothetical protein LOC158055 [Homo sapiens] 27 5.4
gi|13027604 mitochondrial ribosomal protein S34 [Homo sapiens] 27 7.0
gi|41349437 bone morphogenetic protein receptor, type IA precurs... 26 9.2
gi|93102379 low density lipoprotein-related protein 1B precursor... 26 9.2
gi|71274148 pleckstrin homology domain containing, family G (wit... 26 9.2
>gi|4505853 phospholipase A2, group V precursor [Homo sapiens]
Length = 138
Score = 317 bits (811), Expect = 3e-87
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
Sbjct: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
Query: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR 120
DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
Sbjct: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR 120
Query: 121 NLRSYNPQYQYFPNILCS 138
NLRSYNPQYQYFPNILCS
Sbjct: 121 NLRSYNPQYQYFPNILCS 138
>gi|6912596 phospholipase A2, group IID [Homo sapiens]
Length = 145
Score = 136 bits (342), Expect = 6e-33
Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 18 VQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEK 77
+QGG+L+L M+++VTGK + +Y YGC+CG GGRG PKD TDWCC HD CY L+ +
Sbjct: 18 IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDATDWCCQTHDCCYDHLKTQ 77
Query: 78 GCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYF 132
GC+I Y+Y F+ G + C + G +C LCACD+++ +CLKRNL +Y + +++
Sbjct: 78 GCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLKRNLDTYQKRLRFY 133
>gi|239915991 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 134 bits (338), Expect = 2e-32
Identities = 62/137 (45%), Positives = 80/137 (58%)
Query: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
MK LL LA + + G L++ MI+ TGK A +YGFYGC+CG GGRG+PKD T
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR 120
D CC HD CY RLE++GC + SYK+ + +TC C LC CD+ C R
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR 120
Query: 121 NLRSYNPQYQYFPNILC 137
N +YN +YQY+ N C
Sbjct: 121 NKTTYNKKYQYYSNKHC 137
>gi|239915987 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 134 bits (338), Expect = 2e-32
Identities = 62/137 (45%), Positives = 80/137 (58%)
Query: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
MK LL LA + + G L++ MI+ TGK A +YGFYGC+CG GGRG+PKD T
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR 120
D CC HD CY RLE++GC + SYK+ + +TC C LC CD+ C R
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR 120
Query: 121 NLRSYNPQYQYFPNILC 137
N +YN +YQY+ N C
Sbjct: 121 NKTTYNKKYQYYSNKHC 137
>gi|239915985 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 134 bits (338), Expect = 2e-32
Identities = 62/137 (45%), Positives = 80/137 (58%)
Query: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
MK LL LA + + G L++ MI+ TGK A +YGFYGC+CG GGRG+PKD T
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR 120
D CC HD CY RLE++GC + SYK+ + +TC C LC CD+ C R
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR 120
Query: 121 NLRSYNPQYQYFPNILC 137
N +YN +YQY+ N C
Sbjct: 121 NKTTYNKKYQYYSNKHC 137
>gi|4505849 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 134 bits (338), Expect = 2e-32
Identities = 62/137 (45%), Positives = 80/137 (58%)
Query: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
MK LL LA + + G L++ MI+ TGK A +YGFYGC+CG GGRG+PKD T
Sbjct: 1 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT 60
Query: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR 120
D CC HD CY RLE++GC + SYK+ + +TC C LC CD+ C R
Sbjct: 61 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR 120
Query: 121 NLRSYNPQYQYFPNILC 137
N +YN +YQY+ N C
Sbjct: 121 NKTTYNKKYQYYSNKHC 137
>gi|7657461 phospholipase A2, group IIE [Homo sapiens]
Length = 142
Score = 126 bits (316), Expect = 6e-30
Identities = 59/129 (45%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 10 FLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDH 69
FL V V G L+ MIEK+TGK+AL Y YGCYCG GG P D TDWCC AHD
Sbjct: 9 FLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQTDWCCHAHDC 67
Query: 70 CYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQY 129
CYGRLE+ GC + + Y + + + C C C CD++ C +RNL +YN +Y
Sbjct: 68 CYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRRNLGTYNRKY 127
Query: 130 QYFPNILCS 138
++PN LC+
Sbjct: 128 AHYPNKLCT 136
>gi|145553989 phospholipase A2, group IIF [Homo sapiens]
Length = 211
Score = 108 bits (270), Expect = 1e-24
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT 60
MK +A + G LL+LK+M+E VTG++A+ ++ YGCYCG GGRG PKD
Sbjct: 44 MKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEV 103
Query: 61 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGV-VTCEP--GPFCHVNLCACDRKLVYC 117
DWCC AHD CY L ++GC+ Y + + C C C CD+ +V C
Sbjct: 104 DWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLC 163
Query: 118 LKRNLRSYNPQYQYFPNILC 137
L ++Y +Y+ F N+ C
Sbjct: 164 LMN--QTYREEYRGFLNVYC 181
>gi|4505845 phospholipase A2, group X [Homo sapiens]
Length = 165
Score = 98.2 bits (243), Expect = 2e-21
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 21 GLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCN 80
G+L+L + V + + Y YGC+CG GG G P+D DWCC HD CY R EE GC+
Sbjct: 43 GILELAGTVGCVGPRTPIA-YMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCS 101
Query: 81 IRTQSYKYRFAWGVVTCEPGP-FCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILC 137
+T+ Y ++ V C P C LC CD+++ CL + YN +Y ++P LC
Sbjct: 102 PKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQT--EYNLKYLFYPQFLC 157
>gi|157743243 phospholipase A2, group IIC [Homo sapiens]
Length = 150
Score = 75.9 bits (185), Expect = 1e-14
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 29 IEKVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKY 88
++ +TG++A +Y YGCYCG G +G P D TD + Y +L+E C SY++
Sbjct: 30 VKHITGRSAFFSYYGYGCYCGLGDKGIPVDDTD--SPSSPSPYEKLKEFSCQPVLNSYQF 87
Query: 89 RFAWGVVTC----EPGPFCHVNL--CACDRKLVYCLKRNLRSYNPQYQYF 132
G V C PG CH L C CD++ V+C K +L +Y ++ F
Sbjct: 88 HIVNGAVVCGCTLGPGASCHCRLKACECDKQSVHCFKESLPTYEKNFKQF 137
>gi|4505847 phospholipase A2 group IB [Homo sapiens]
Length = 148
Score = 72.0 bits (175), Expect = 1e-13
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 32 VTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEE-KGC-----NIRTQS 85
+ G + Y YGCYCG GG GTP D D CC HD+CY + ++ C N T +
Sbjct: 35 IPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHT 94
Query: 86 YKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCLKR 120
Y Y + +TC C +C CDR C +
Sbjct: 95 YSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSK 130
>gi|223029412 otoconin 90 [Homo sapiens]
Length = 477
Score = 59.3 bits (142), Expect = 1e-09
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 44 YGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEP---- 99
YGCYCG GRG P+D D CC +H C ++ GC + R W V C
Sbjct: 326 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRLGCLLE------RLPWSPVVCVDHTPK 379
Query: 100 ---GPFCHVNLCACDRKLVYCL 118
C LCACD+ C+
Sbjct: 380 CGGQSLCEKLLCACDQTAAECM 401
Score = 51.6 bits (122), Expect = 2e-07
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 44 YGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGC--NIRTQSYKYRFAWGVVTCEPGP 101
YGC C + G P D +D CC+ H CY E C + S + + CE
Sbjct: 97 YGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQDPAKLSTEVNCVSKKIICESKD 156
Query: 102 FCHVNLCACDRKLVYCLKRN 121
C LC CD+ + CL R+
Sbjct: 157 NCEHLLCTCDKAAIECLARS 176
>gi|239751105 PREDICTED: hypothetical protein XP_002347705 [Homo
sapiens]
Length = 138
Score = 38.1 bits (87), Expect = 0.002
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 63 CCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC 97
CC HD CY R EE GC+ +T+ Y ++ V C
Sbjct: 37 CCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLC 71
>gi|239745592 PREDICTED: hypothetical protein XP_002344154 [Homo
sapiens]
Length = 138
Score = 35.4 bits (80), Expect = 0.015
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 63 CCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC 97
CC HD CY EE GC+ +T+ Y ++ V C
Sbjct: 37 CCHGHDCCYTGAEEAGCSPKTERYSWQCVNQSVLC 71
>gi|56237021 fibrillin 3 precursor [Homo sapiens]
Length = 2809
Score = 30.4 bits (67), Expect = 0.49
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 21/77 (27%)
Query: 42 GFYGCYCGWGGRGTPK-----DGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYR------- 89
G Y C CG G R P D T CW +++E C + Q R
Sbjct: 785 GSYTCKCGPGSRLDPSGTFCLDSTKGTCWL------KIQESRCEVNLQGASLRSECCATL 838
Query: 90 -FAWG--VVTCEPGPFC 103
AWG CE P C
Sbjct: 839 GAAWGSPCERCEIDPAC 855
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 30.0 bits (66), Expect = 0.63
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 10/67 (14%)
Query: 46 CYCGWGGRGTPKDGTDWC--CWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFC 103
C C GG P+DG+ C W HC +GC + T C PG C
Sbjct: 665 CQCHHGGTCHPQDGSCICPLGWTGHHCL-----EGCPLGTFGAN---CSQPCQCGPGEKC 716
Query: 104 HVNLCAC 110
H AC
Sbjct: 717 HPETGAC 723
>gi|194306650 SET domain and mariner transposase fusion [Homo
sapiens]
Length = 684
Score = 30.0 bits (66), Expect = 0.63
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 40 NYGFYGCYCGWGGRGTPKDGTDWC---CWAHDHCYGRLEEKGCNIRTQSYK-YRFAWGVV 95
NY C G G + C C DHC R+ +KG Q +K ++ WG+
Sbjct: 95 NYDDNSCLRDIGSGGKYAEPVFECNVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLR 154
Query: 96 TCE 98
T E
Sbjct: 155 TLE 157
>gi|7019381 fibronectin leucine rich transmembrane protein 2 [Homo
sapiens]
Length = 660
Score = 28.1 bits (61), Expect = 2.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 106 NLCACDRKLVYCLKRNLRS 124
++C CDR VYC +R+L S
Sbjct: 38 SVCRCDRNFVYCNERSLTS 56
>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
Length = 2778
Score = 27.7 bits (60), Expect = 3.1
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 22/94 (23%)
Query: 36 NALTNYGFYGCY----CGWGGRGT--------PKDGTDWC----C---WAHDHCYGRLEE 76
N +++GF CG GG G+ P+DG C WA HC L
Sbjct: 1324 NGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCP 1383
Query: 77 KGCNIRTQSYKYRFAWGVVTCEP---GPFCHVNL 107
+ CN T + + GV C GP C L
Sbjct: 1384 ENCNAHTGAGTCNQSLGVCICAEGFGGPDCATKL 1417
>gi|142976884 phospholipase A2, group III precursor [Homo sapiens]
Length = 509
Score = 27.7 bits (60), Expect = 3.1
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 14/61 (22%)
Query: 59 GTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCL 118
G D CC HD C + N ++Y+ F ++ C CD + CL
Sbjct: 176 GPDLCCREHDRCPQNISPLQYNYGIRNYR--------------FHTISHCDCDTRFQQCL 221
Query: 119 K 119
+
Sbjct: 222 Q 222
>gi|21389577 hypothetical protein LOC146705 [Homo sapiens]
Length = 525
Score = 27.7 bits (60), Expect = 3.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 51 GGRGTPKDGTDWCCWAHDHCYGRLEEKGC 79
GG +PK G C W+ D + +E C
Sbjct: 451 GGTDSPKRGPSSCAWSRDSLFAGMELVAC 479
>gi|14150132 hypothetical protein LOC84302 [Homo sapiens]
Length = 403
Score = 26.9 bits (58), Expect = 5.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 115 VYCLKRNLRSYNPQY 129
VYCL+ +L++YNP Y
Sbjct: 192 VYCLESSLQTYNPDY 206
>gi|22749177 hypothetical protein LOC158055 [Homo sapiens]
Length = 203
Score = 26.9 bits (58), Expect = 5.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 99 PGPFCHVNLCACDRKLVYCLKR 120
PGP C N+C + + CL R
Sbjct: 94 PGPICSANICLSGVRFLTCLNR 115
>gi|13027604 mitochondrial ribosomal protein S34 [Homo sapiens]
Length = 218
Score = 26.6 bits (57), Expect = 7.0
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 65 WAHDH-CYGRLEEKGCNIRTQSYKYRFAWGVVT 96
W HD CY RL + Q+ + AWG++T
Sbjct: 87 WQHDEPCYWRLTRVRPDYTAQNLDHGKAWGILT 119
>gi|41349437 bone morphogenetic protein receptor, type IA precursor
[Homo sapiens]
Length = 532
Score = 26.2 bits (56), Expect = 9.2
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 22/121 (18%)
Query: 15 VPAVQGGLLD-------LKSMIEKVTGKNALT-----NYGFYGCYCGWGGRGTPKDGTDW 62
+ VQG LD +KS ++ +N +T F CYC P D +
Sbjct: 18 ISRVQGQNLDSMLHGTGMKSDSDQKKSENGVTLAPEDTLPFLKCYCSGH---CPDDAINN 74
Query: 63 CCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPF-CHVNLCACDRKLVYCLKRN 121
C + HC+ +EE T A G + E F C + A R+ + C + N
Sbjct: 75 TCITNGHCFAIIEEDDQGETT------LASGCMKYEGSDFQCKDSPKAQLRRTIECCRTN 128
Query: 122 L 122
L
Sbjct: 129 L 129
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 26.2 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 62 WCCWAHDHCYGRLEEKGCN--IRTQSYKYRFA-WGVVTC 97
W C C +EKGCN IR +K +F+ W C
Sbjct: 1071 WRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRC 1109
>gi|71274148 pleckstrin homology domain containing, family G (with
RhoGef domain) member 1 [Homo sapiens]
Length = 1385
Score = 26.2 bits (56), Expect = 9.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 65 WAHDHCYGRLEEKGCNIRTQSY 86
W DH Y L KG + ++Q Y
Sbjct: 1157 WCQDHLYNSLGRKGISAKSQPY 1178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.144 0.530
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,332,326
Number of Sequences: 37866
Number of extensions: 282452
Number of successful extensions: 734
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 700
Number of HSP's gapped (non-prelim): 30
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.