Guide to the Human Genome
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Name: PIM1 Sequence: fasta or formatted (313aa) NCBI GI: 4505811
Description:

non-specific serine/threonine protein kinase

Referenced in:

Capping and Splicing
Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           2
 C cysteine            1.9          6           1
 D aspartate           6.4         20           1
 E glutamate           7.7         24           2
 F phenylalanine       4.5         14           2
 G glycine             7.0         22           2
 H histidine           4.2         13           1
 I isoleucine          6.1         19           2
 K lysine              3.8         12           2
 L leucine            12.1         38           2
 M methionine          1.3          4           1
 N asparagine          2.6          8           1
 P proline             6.1         19           2
 Q glutamine           3.5         11           1
 R arginine            7.0         22           1
 S serine              7.3         23           2
 T threonine           2.6          8           1
 V valine              7.0         22           2
 W tryptophan          2.2          7           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   non-specific serine/threonine protein kinase 
PIM3                  0.662   serine/threonine protein kinase pim-3 
PIM2                  0.502   serine/threonine protein kinase pim-2 
NUAK1                 0.195   AMPK-related protein kinase 5 
NUAK2                 0.190   NUAK family, SNF1-like kinase, 2 
SIK2                  0.188   SNF1-like kinase 2 
PASK                  0.185   PAS domain containing serine/threonine kinase 
BRSK1                 0.185   BR serine/threonine kinase 1 
SIK1                  0.183   SNF1-like kinase 
BRSK2                 0.177   BR serine/threonine kinase 2 
MARK2                 0.170   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.170   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.170   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.170   MAP/microtubule affinity-regulating kinase 2 isofor...
MELK                  0.167   maternal embryonic leucine zipper kinase 
MARK2                 0.166   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK4                 0.166   MAP/microtubule affinity-regulating kinase 4 
MARK3                 0.164   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.164   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.164   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.164   MAP/microtubule affinity-regulating kinase 3 isoform...
SNRK                  0.162   SNF related kinase 
SNRK                  0.162   SNF related kinase 
MARK1                 0.161   MAP/microtubule affinity-regulating kinase 1 
QSK                   0.161   serine/threonine-protein kinase QSK 
TSSK2                 0.156   testis-specific serine kinase 2 
TSSK3                 0.154   testis-specific serine kinase 3 
PRKAA2                0.151   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.145   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKD1                 0.143   protein kinase D1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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