Guide to the Human Genome
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Name: PASK Sequence: fasta or formatted (1323aa) NCBI GI: 35038528
Description:

PAS domain containing serine/threonine kinase

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         98           2
 C cysteine            3.3         44           2
 D aspartate           5.4         71           2
 E glutamate           8.1        107           2
 F phenylalanine       3.1         41           2
 G glycine             8.5        113           2
 H histidine           2.1         28           1
 I isoleucine          3.4         45           2
 K lysine              3.2         42           2
 L leucine            11.3        150           4
 M methionine          1.3         17           1
 N asparagine          2.0         27           1
 P proline             6.7         88           2
 Q glutamine           4.3         57           2
 R arginine            4.7         62           2
 S serine              9.6        127           3
 T threonine           5.1         68           2
 V valine              7.2         95           3
 W tryptophan          1.4         19           2
 Y tyrosine            1.8         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PAS domain containing serine/threonine kinase 
NUAK1                 0.051   AMPK-related protein kinase 5 
BRSK1                 0.050   BR serine/threonine kinase 1 
MARK2                 0.049   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.049   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.049   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.049   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.049   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK4                 0.049   MAP/microtubule affinity-regulating kinase 4 
MARK3                 0.049   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.049   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.049   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.049   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK1                 0.048   MAP/microtubule affinity-regulating kinase 1 
NUAK2                 0.048   NUAK family, SNF1-like kinase, 2 
BRSK2                 0.047   BR serine/threonine kinase 2 
SNRK                  0.047   SNF related kinase 
SNRK                  0.047   SNF related kinase 
SIK2                  0.045   SNF1-like kinase 2 
PIM3                  0.043   serine/threonine protein kinase pim-3 
PIM1                  0.043   non-specific serine/threonine protein kinase 
PIM2                  0.043   serine/threonine protein kinase pim-2 
MGC42105              0.042   serine/threonine-protein kinase NIM1 
SIK1                  0.041   SNF1-like kinase 
PRKAA1                0.041   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA2                0.041   AMP-activated protein kinase alpha 2 catalytic subun...
QSK                   0.041   serine/threonine-protein kinase QSK 
HUNK                  0.039   hormonally upregulated Neu-associated kinase 
MELK                  0.039   maternal embryonic leucine zipper kinase 
TSSK2                 0.039   testis-specific serine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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