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Search of human proteins with 4505227
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505227 myeloid cell nuclear differentiation antigen [Homo
sapiens]
(407 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505227 myeloid cell nuclear differentiation antigen [Homo sa... 805 0.0
gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform... 399 e-111
gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isofor... 399 e-111
gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform... 393 e-109
gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isofor... 393 e-109
gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] 389 e-108
gi|4757734 absent in melanoma 2 [Homo sapiens] 179 3e-45
gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens] 93 5e-19
gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens] 91 1e-18
gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo sap... 91 1e-18
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 47 2e-05
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 47 2e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 45 9e-05
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 42 8e-04
gi|104526627 triadin [Homo sapiens] 42 0.001
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 41 0.002
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 41 0.002
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] 39 0.011
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 39 0.011
gi|56118234 proline rich 6 [Homo sapiens] 38 0.014
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 38 0.019
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 38 0.019
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 38 0.019
gi|121114302 cullin 4B isoform 2 [Homo sapiens] 37 0.025
gi|121114298 cullin 4B isoform 1 [Homo sapiens] 37 0.025
gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens] 37 0.042
gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens] 37 0.042
gi|109637791 transcription factor-like nuclear regulator [Homo s... 37 0.042
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 36 0.055
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 36 0.055
>gi|4505227 myeloid cell nuclear differentiation antigen [Homo
sapiens]
Length = 407
Score = 805 bits (2080), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA
Sbjct: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN
Sbjct: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
Query: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS
Sbjct: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
Query: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV
Sbjct: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
Query: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDFNQNFEVPNRII 300
ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDFNQNFEVPNRII
Sbjct: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDFNQNFEVPNRII 300
Query: 301 EIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHNIK 360
EIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHNIK
Sbjct: 301 EIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHNIK 360
Query: 361 CEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMNVN 407
CEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMNVN
Sbjct: 361 CEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMNVN 407
>gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform
[Homo sapiens]
Length = 461
Score = 399 bits (1024), Expect = e-111
Identities = 214/400 (53%), Positives = 282/400 (70%), Gaps = 5/400 (1%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKT---QEKAPVKKINQEEVGLAAPAPT 117
L KLIE K++P+L +L L++EK KVA KI++ + P KK Q+EV A PA T
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120
Query: 118 ARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQ 177
N+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQ
Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180
Query: 178 TSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFH 237
TSSS P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFH
Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240
Query: 238 ATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEV 295
ATVA++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEV
Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300
Query: 296 PNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGK 355
P II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+
Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360
Query: 356 WHNIKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395
HNI CEKGDKLRLFC +LR + KL+ HSFI++ K
Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 400
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
+KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ
Sbjct: 386 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 442
Query: 180 SSTPSNTSFT 189
+TPS++SFT
Sbjct: 443 PTTPSSSSFT 452
>gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isoform
[Homo sapiens]
Length = 492
Score = 399 bits (1024), Expect = e-111
Identities = 214/400 (53%), Positives = 282/400 (70%), Gaps = 5/400 (1%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKT---QEKAPVKKINQEEVGLAAPAPT 117
L KLIE K++P+L +L L++EK KVA KI++ + P KK Q+EV A PA T
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120
Query: 118 ARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQ 177
N+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQ
Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180
Query: 178 TSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFH 237
TSSS P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFH
Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240
Query: 238 ATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEV 295
ATVA++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEV
Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300
Query: 296 PNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGK 355
P II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+
Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360
Query: 356 WHNIKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395
HNI CEKGDKLRLFC +LR + KL+ HSFI++ K
Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 400
Score = 48.9 bits (115), Expect = 8e-06
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
+KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ
Sbjct: 386 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 442
Query: 180 SSTPSNTSFTPNQETQAQRQ 199
+TPS++SFT ET Q
Sbjct: 443 PTTPSSSSFTKKDETHPGAQ 462
>gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform
[Homo sapiens]
Length = 452
Score = 393 bits (1009), Expect = e-109
Identities = 212/397 (53%), Positives = 277/397 (69%), Gaps = 8/397 (2%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
L KLIE K++P+L +L L++EK KV I P KK Q+EV A PA T N
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGII------PSKKTKQKEVYPATPACTPSN 114
Query: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQTSS
Sbjct: 115 RLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
Query: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
S P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFHATV
Sbjct: 175 SAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATV 234
Query: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEVPNR 298
A++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEVP
Sbjct: 235 ATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKD 294
Query: 299 IIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHN 358
II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+ HN
Sbjct: 295 IIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHN 354
Query: 359 IKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395
I CEKGDKLRLFC +LR + KL+ HSFI++ K
Sbjct: 355 IPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 391
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
+KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ
Sbjct: 377 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 433
Query: 180 SSTPSNTSFT 189
+TPS++SFT
Sbjct: 434 PTTPSSSSFT 443
>gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isoform
[Homo sapiens]
Length = 483
Score = 393 bits (1009), Expect = e-109
Identities = 212/397 (53%), Positives = 277/397 (69%), Gaps = 8/397 (2%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
L KLIE K++P+L +L L++EK KV I P KK Q+EV A PA T N
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGII------PSKKTKQKEVYPATPACTPSN 114
Query: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQTSS
Sbjct: 115 RLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
Query: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
S P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFHATV
Sbjct: 175 SAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATV 234
Query: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEVPNR 298
A++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEVP
Sbjct: 235 ATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKD 294
Query: 299 IIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHN 358
II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+ HN
Sbjct: 295 IIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHN 354
Query: 359 IKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395
I CEKGDKLRLFC +LR + KL+ HSFI++ K
Sbjct: 355 IPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 391
Score = 48.9 bits (115), Expect = 8e-06
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
+KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ
Sbjct: 377 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 433
Query: 180 SSTPSNTSFTPNQETQAQRQ 199
+TPS++SFT ET Q
Sbjct: 434 PTTPSSSSFTKKDETHPGAQ 453
>gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]
Length = 729
Score = 389 bits (999), Expect = e-108
Identities = 210/408 (51%), Positives = 282/408 (69%), Gaps = 15/408 (3%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
M +YK I+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF+G A
Sbjct: 1 MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKFRGDA 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAP-VKKINQEEVGLAAPAPTAR 119
L KLI++ +D+P+L++L L+KEK KV K P + + ++EV +PAP+
Sbjct: 61 GLGKLIKIFEDIPTLEDLAETLKKEKLKV--------KGPALSRKRKKEVDATSPAPSTS 112
Query: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
+ + +E P AQKRK KEK K +KVS+EQ++PP P+GA S A+ P P+TS
Sbjct: 113 STVKTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTS 172
Query: 180 SSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHAT 239
S P N+S T N +T A+ QV RRNV Q PV V VL T PF+YE+PE K MFHAT
Sbjct: 173 LSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHAT 232
Query: 240 VASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEVPN 297
VA++TQ+FHVKV + +LKEKF KK+I ISDY E ++E+ E S+VS+ NQ FEVPN
Sbjct: 233 VATQTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPN 292
Query: 298 RIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWH 357
+II A +T KI L+KQASG +VYG+FML KK+V++K TIYEIQD+ G MDVVG+G+ H
Sbjct: 293 KIINRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCH 352
Query: 358 NIKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMN 405
NI CE+GDKL+LFC +LR ++ KL+ HSFI++ K K P N
Sbjct: 353 NIPCEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQI----KKKTNPRN 396
Score = 185 bits (469), Expect = 7e-47
Identities = 133/351 (37%), Positives = 187/351 (53%), Gaps = 27/351 (7%)
Query: 76 KNLVNNLRKEKS---KVAKKIKTQEKAPVK-KINQEEVGLAAPAPTARNKLTSEARGRIP 131
KN ++ L E ++ KK + P K+ QE+ L P P+ + E+ R P
Sbjct: 372 KNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQL--PYPSEASTTFPESHLRTP 429
Query: 132 VAQKRK------TPNKEKTEAKRN-----KVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
T E T +K N ++ +E S PGP S A HP PQ
Sbjct: 430 QMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIGPAESHPHTPQMPP 489
Query: 181 STPSN---TSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFH 237
STPS+ T+ P +T+ + + + Q+D V+VL AT F YE E K MFH
Sbjct: 490 STPSSSFLTTLKPRLKTEPEEV--SIEDSAQSDLKEVMVLNATESFVYEPKEQKK--MFH 545
Query: 238 ATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDFN--QNFEV 295
ATVA++ + F VKVF+I+LKEKF KK+I I++Y G +E+ + V+D N +N E+
Sbjct: 546 ATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNADRNMEI 605
Query: 296 PNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGK 355
P +I A+ TPKI+QL Q G+ V G+F + KK+V + T YEIQDNTG M+VV G+
Sbjct: 606 PKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTGKMEVVVHGR 665
Query: 356 WHNIKCEKGDKLRLFCLQLRTVDRKL-KLVCGSHSFIKVIKAKKNKEGPMN 405
I CE+GDKL+L C +L +L HS IKVIK +KNK+ +N
Sbjct: 666 LTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN 716
>gi|4757734 absent in melanoma 2 [Homo sapiens]
Length = 343
Score = 179 bits (455), Expect = 3e-45
Identities = 127/400 (31%), Positives = 199/400 (49%), Gaps = 61/400 (15%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
M ++YK+ILLL G + + D K L+ + + T NRI++ LM + V+
Sbjct: 1 MESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTANRIQVATLMIQNAGAVS 60
Query: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
+ K I + + + + L L++EK +K++++ + P P ++
Sbjct: 61 AVMKTIRIFQKLNYML-LAKRLQEEK---------------EKVDKQYKSVTKPKPLSQA 104
Query: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
+++ A I RN V+++++ P
Sbjct: 105 EMSPAASAAI-----------------RNDVAKQRAAPK--------------------- 126
Query: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
+ P Q+ +Q R Q + V+VLKA PF +E+ E GK MFHATV
Sbjct: 127 ---VSPHVKPEQKQMVAQQESIREGF-QKRCLPVMVLKAKKPFTFETQE-GKQEMFHATV 181
Query: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEVPNR 298
A++ ++F VKVF+ LK+KF+ K++I I+ Y G +E+ AS V D +Q VP
Sbjct: 182 ATEKEFFFVKVFNTLLKDKFIPKRIIIIARYYRHSGFLEVNSASRVLDAESDQKVNVPLN 241
Query: 299 IIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHN 358
II A +TPKI+ L Q GT+V GLF++QK + KKN ++++ DNTG M+V+G
Sbjct: 242 IIRKAGETPKINTLQTQPLGTIVNGLFVVQKVTEKKKNILFDLSDNTGKMEVLGVRNEDT 301
Query: 359 IKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKK 398
+KC++GDK+RL L KL+L G HS IKVIKAKK
Sbjct: 302 MKCKEGDKVRLTFFTLSKNGEKLQLTSGVHSTIKVIKAKK 341
>gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens]
Length = 196
Score = 92.8 bits (229), Expect = 5e-19
Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 17/156 (10%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
MV++YK +LLKG E ++DYHF+ I SLL DL L + ++EY++I+I DLME+KF G A
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 CLDKLIELAKDMPSLK-NLVNNLRKEKSKVA----------------KKIKTQEKAPVKK 103
L KL L ++ + + +L LRK K A K I + K KK
Sbjct: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 104 INQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTP 139
Q +VG P T K T+E P+AQ+ TP
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens]
Length = 196
Score = 91.3 bits (225), Expect = 1e-18
Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
MV++YK +LLKG E ++DYHF+ I SLL DL L + ++EY++I+I DLME+KF G A
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 CLDKLIELAKDMPSLK-NLVNNLRKEKSKVA----------------KKIKTQEKAPVKK 103
KL L ++ + + +L LRK K A K I + K KK
Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 104 INQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTP 139
Q +VG P T K T+E P+AQ+ TP
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo
sapiens]
Length = 196
Score = 91.3 bits (225), Expect = 1e-18
Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
Query: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
MV++YK +LLKG E ++DYHF+ I SLL DL L + ++EY++I+I DLME+KF G A
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 CLDKLIELAKDMPSLK-NLVNNLRKEKSKVA----------------KKIKTQEKAPVKK 103
KL L ++ + + +L LRK K A K I + K KK
Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 104 INQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTP 139
Q +VG P T K T+E P+AQ+ TP
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 47.4 bits (111), Expect = 2e-05
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 8/169 (4%)
Query: 81 NLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPN 140
N+ +E+ K+K ++ +K +EEV + K E G P +K K
Sbjct: 64 NILEEELNEDIKVKEEQ---LKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKE 120
Query: 141 KEKTEAKRNKVSQEQSKPPGPSGASTSAA----VDHPPLPQTSSSTPSNTSFTPNQETQA 196
KEK + K + +E+ K + SAA PP TS S P+ T+ T Q ++
Sbjct: 121 KEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNTSPSVPTTTTATEEQVSEP 180
Query: 197 QRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATVASKTQ 245
++ + RRN P D V++ L + E + + T+ S +Q
Sbjct: 181 KKW-NLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRPTVVKRKGRSASQ 228
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 47.4 bits (111), Expect = 2e-05
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 8/169 (4%)
Query: 81 NLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPN 140
N+ +E+ K+K ++ +K +EEV + K E G P +K K
Sbjct: 64 NILEEELNEDIKVKEEQ---LKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKE 120
Query: 141 KEKTEAKRNKVSQEQSKPPGPSGASTSAA----VDHPPLPQTSSSTPSNTSFTPNQETQA 196
KEK + K + +E+ K + SAA PP TS S P+ T+ T Q ++
Sbjct: 121 KEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNTSPSVPTTTTATEEQVSEP 180
Query: 197 QRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATVASKTQ 245
++ + RRN P D V++ L + E + + T+ S +Q
Sbjct: 181 KKW-NLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRPTVVKRKGRSASQ 228
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 45.4 bits (106), Expect = 9e-05
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 84 KEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPT---ARNKLTSEARG----RIPVAQKR 136
KE++K +K K+ EK K + + + A A + A++ + +EA+ + PV ++
Sbjct: 643 KEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA 702
Query: 137 KTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQA 196
K+P K K+ K S E++K P A T P + S P +T
Sbjct: 703 KSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKS--PEKAKSPEKAKTLD 760
Query: 197 QRQVDARRNVPQ--NDPVTVVVLKATAPFKYE--SPENGKSTM 235
+ +A+ + P KA +P K E SPE KS +
Sbjct: 761 VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPL 803
Score = 42.7 bits (99), Expect = 6e-04
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 84 KEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEK 143
KE++K ++K+ EKA K +E + P + K +++ + +K K+P KE+
Sbjct: 535 KEEAKSPAEVKSPEKA---KSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEE 591
Query: 144 TEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDAR 203
++ S E++K P A + A P + S + T+ + + +
Sbjct: 592 AKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK 651
Query: 204 RNVPQNDPVTVVVLKATAPFKYE--SPENGKS 233
P+ + KA +P K E SPE KS
Sbjct: 652 AKSPEKEEAKSPE-KAKSPVKAEAKSPEKAKS 682
Score = 38.1 bits (87), Expect = 0.014
Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 21/201 (10%)
Query: 53 EKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLA 112
E+K + V +K + ++ + + +E+ K AK+ + +E+ ++ E
Sbjct: 441 EEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEE 500
Query: 113 APAPTARNKLTSEARGRIPVAQKR--------------------KTPNKEKTEAKRNKVS 152
+P A + E + PV ++ K+P K K+ AK S
Sbjct: 501 TKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKS 560
Query: 153 QEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPV 212
++K P A + A V P ++ + + + +A+ V P +
Sbjct: 561 PPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPA-EAK 619
Query: 213 TVVVLKATAPFKYESPENGKS 233
+ V +A +P + +SPE KS
Sbjct: 620 SPVKEEAKSPAEVKSPEKAKS 640
Score = 38.1 bits (87), Expect = 0.014
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 84 KEKSKVAKKIKTQEKA--PVKKINQEEVGLAAPAPTARN---KLTSEARGRIPVAQKRKT 138
KE++K + K+ EKA PVK+ + +P ++ S + + P ++ K+
Sbjct: 589 KEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKS 648
Query: 139 PNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQR 198
P K K+ K S E++K P + A + P + + +P +E ++
Sbjct: 649 PEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSP--VKAEAKSPEKAKSPVKEEAKSPE 706
Query: 199 QVDARRNVPQNDPVTVVVLKATAPFKYE--SPENGKS 233
+ + P KA +P K E +PE KS
Sbjct: 707 KAKSPVKEEAKSPE-----KAKSPVKEEAKTPEKAKS 738
Score = 37.0 bits (84), Expect = 0.032
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 12/133 (9%)
Query: 66 IELAKDMPSLKNLVNNLRKE---KSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKL 122
+E K+ K V KE K +V + K +EK V K ++ P+ A K
Sbjct: 890 VEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKE 949
Query: 123 TSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSST 182
+ + + +K K KTEAK + + SK P A + + SSST
Sbjct: 950 AAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKA---------EKSSST 1000
Query: 183 PSNTSFTPNQETQ 195
S P + T+
Sbjct: 1001 DQKDSKPPEKATE 1013
Score = 34.7 bits (78), Expect = 0.16
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
Query: 76 KNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPV--A 133
K+ V K K +K KAP K+I ++E +P + E + + P A
Sbjct: 786 KSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKE---EVKSPVKEEEKPQEVKVKEPPKKA 842
Query: 134 QKRKTPNKEKTEAKRNKVSQEQSKPPGPS---GASTSAAVDHP--PLPQTSSSTPSNTSF 188
++ K P KTE K++ +E K P AV+ P + +
Sbjct: 843 EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Query: 189 TPNQETQAQRQVDARRNVPQNDPVTV 214
P E +A +V+ + + + V
Sbjct: 903 VPTPEKEAPAKVEVKEDAKPKEKTEV 928
Score = 34.3 bits (77), Expect = 0.21
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 16/157 (10%)
Query: 84 KEKSKVAKKIKTQEKAPVKKINQEEVGLAA------PAPTARNKLTSEARGRIPVAQKRK 137
KE++K +K K+ EKA + E A PA K S + + +K K
Sbjct: 741 KEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 800
Query: 138 TPNKEKTEAKRNKV--SQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQ 195
+P KE +A ++ +E P V PP P+ TP E
Sbjct: 801 SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA----TPKTE-- 854
Query: 196 AQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGK 232
+++ + P+ + V + P E P+ K
Sbjct: 855 -EKKDSKKEEAPKKEAPKPKVEEKKEP-AVEKPKESK 889
Score = 28.9 bits (63), Expect = 8.7
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Query: 83 RKEKS--KVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKL---TSEARGRIPVAQKRK 137
+KE++ K A K K +EK +E + A A +K T E V K
Sbjct: 860 KKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKED 919
Query: 138 TPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQ 197
KEKTE + + ++K P AA + + + P P E +A+
Sbjct: 920 AKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEE---KPKTEAKAK 976
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 42.4 bits (98), Expect = 8e-04
Identities = 23/89 (25%), Positives = 33/89 (37%)
Query: 140 NKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQ 199
++E TE ++Q PP P G D P S S PS T ET+
Sbjct: 2112 SEEPTEESEKPLTQSGGAPPPPGGKQQGRQCDETPPTSVSESAPSQTDSDVPPETEECPS 2171
Query: 200 VDARRNVPQNDPVTVVVLKATAPFKYESP 228
+ A N+ D + T +K+ P
Sbjct: 2172 ITADANIDSEDESETIPTDKTVTYKHMDP 2200
Score = 37.7 bits (86), Expect = 0.019
Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 38 KMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQE 97
K +E+ + ++ ++K+ + + E+ K+ P K + ++KE+ K KK + +
Sbjct: 670 KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPP-KEVKKEVKKEEKKEVKKEEKEP 728
Query: 98 KAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAK--------RN 149
K +KK+ ++ A+ T + + P A K K P KE++ K +
Sbjct: 729 KKEIKKLPKD----------AKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKE 778
Query: 150 KVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQV 200
K + K G + + +AAV + + P +E +A+R +
Sbjct: 779 KGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAGIAAIGPAKELEAERSL 829
Score = 35.4 bits (80), Expect = 0.093
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 84 KEKSKVAKK-IKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNK- 141
KEK+K K KT+ +PVKK + + LAA A K +S+ R+ +K+++ K
Sbjct: 2240 KEKTKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKESVEKA 2299
Query: 142 ------EKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFT 189
+ +A R + +++K + AS SA +T+++ P T T
Sbjct: 2300 AKPTTTPEVKAARGEEKDKETKNAANASASKSA--------KTATAGPGTTKTT 2345
Score = 35.0 bits (79), Expect = 0.12
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 34/222 (15%)
Query: 10 LLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELA 69
+L+G E + H +K LA LT ++ +K T L ++ + L A
Sbjct: 498 ILEGLEKLK--HLDFLKQPLATQKDLTGQVPTPV--VKQTKLKQR----ADSRESLKPAA 549
Query: 70 KDMPSLKNLVNNLRKEKSKVAK--------KIKTQEKAPVKK-----------INQEEV- 109
K +PS K++ ++E +V K K++++EK VKK + ++EV
Sbjct: 550 KPLPS-KSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVP 608
Query: 110 GLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAA 169
P+P +A P A K KT KE T+ K +E+ KP +
Sbjct: 609 SKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKE-TKVKPEDKKEEKEKPK----KEVAKK 663
Query: 170 VDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDP 211
D P+ + +E + + + + ++ V + P
Sbjct: 664 EDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETP 705
Score = 30.4 bits (67), Expect = 3.0
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 82 LRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNK 141
++KE+ +++K + K +KK ++E T ++ E + +++K K
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVK-----KEEKKEVKK 723
Query: 142 EKTEAKR--NKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNT 186
E+ E K+ K+ ++ K P + A P +P+ S ++
Sbjct: 724 EEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDS 770
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 41.6 bits (96), Expect = 0.001
Identities = 80/377 (21%), Positives = 136/377 (36%), Gaps = 47/377 (12%)
Query: 73 PSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPV 132
P+L+ +K + KV + K +EK +KK +++E + K + +G + +
Sbjct: 307 PALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEP-GKASETKQGTVKI 365
Query: 133 AQKRKTPNKEKTE-AKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPN 191
A + EK E +K+ K E +P G V+ P+ S PS+
Sbjct: 366 AAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAK 425
Query: 192 QETQAQR--QVDARRNVP--QNDPVTVVVL---------KATAPFKYESPENGKSTMFHA 238
E + V ++ VP + + T V K ++ K + P GK A
Sbjct: 426 TERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPA 485
Query: 239 TVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKE------ASSVSDFNQN 292
++ K K ++ K V+ K + E K +IK+ + V Q+
Sbjct: 486 SLKEKEPETK-KDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQD 544
Query: 293 FEVPNRIIEIANKTPKISQLYKQASGTMVYGLFMLQ--KKSVHKKNTIYEIQDN------ 344
P + + K+ KQ + + KK+ H++ I+ +
Sbjct: 545 IVKPEKTVSHGKPEEKV---LKQVKAVTIEKTAKPKPTKKAEHREREPPSIKTDKPKPTP 601
Query: 345 TGSMDVVGSGKWHNIKCEKGDK--------------LRLFCLQLRTVDRKLKLVCGSHSF 390
G+ +V SGK EK K R LQL V + K S
Sbjct: 602 KGTSEVTESGKKKTEISEKESKEKADMKHLREEKVSTRKESLQLHNVTKAEKPARVSKDV 661
Query: 391 IKVIKAKKNKEGPMNVN 407
V +KK KEG +V+
Sbjct: 662 EDVPASKKAKEGTEDVS 678
Score = 32.7 bits (73), Expect = 0.61
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 45/208 (21%)
Query: 70 KDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEV---------------GLAAP 114
++ P K KEK K +K++ +EK K ++E++ A
Sbjct: 151 QEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAKT 210
Query: 115 APTARNKLTSEARG-----------RIPVAQKRKTPNKEKTEAKRNKVSQEQSKPP---- 159
A + K E +G ++ QK + KEK + ++ VS+ + K
Sbjct: 211 AEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFC 270
Query: 160 ---------GPSGASTSAAVDHPPLP--QTSSSTPSNTSF--TPNQETQAQRQVDARRNV 206
G S A+ PPLP Q S TP++ + ++ +A+++V +
Sbjct: 271 RYMIDIFVHGDLKPGQSPAIP-PPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKK 329
Query: 207 PQNDPVTVVVLKATAPFKYESPENGKST 234
+ + + K TA E E GK++
Sbjct: 330 KEKEDIKKKSEKETA-IDVEKKEPGKAS 356
Score = 30.4 bits (67), Expect = 3.0
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 23/119 (19%)
Query: 45 RIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKI 104
++K K+ G + K + K+ + K + +RKEKS I ++K P+K
Sbjct: 421 QVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSI-LKDKEPIK-- 477
Query: 105 NQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSG 163
+EE ++P + K K P +K E + + KPP G
Sbjct: 478 GKEE--------------------KVPASLKEKEPETKKDEKMSKAGKEVKPKPPQLQG 516
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 86 KSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTE 145
K V +K+ ++E AP+K+ +++ PT + KL + G P+K KT
Sbjct: 244 KKLVPRKVVSRESAPIKE--PKKLMPKTSLPTVK-KLATATTG----------PSKAKTS 290
Query: 146 AKRNKVSQE-QSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQR-QVDAR 203
++ SQ+ S+ GP+G S HP ++ + TP S + +E + + +
Sbjct: 291 RTPSRDSQKLTSRDSGPNGGFQSGGSYHPGRKRSKTQTPQQRSVSSQEEEHSSPVKAPSV 350
Query: 204 RNVPQNDPVTVVVLKATAPFKYESPENGKST 234
+ P D K P + +PEN S+
Sbjct: 351 KRTPMPD-------KTATPERPPAPENAPSS 374
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 86 KSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTE 145
K V +K+ ++E AP+K+ +++ PT + KL + G P+K KT
Sbjct: 133 KKLVPRKVVSRESAPIKE--PKKLMPKTSLPTVK-KLATATTG----------PSKAKTS 179
Query: 146 AKRNKVSQE-QSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQR-QVDAR 203
++ SQ+ S+ GP+G S HP ++ + TP S + +E + + +
Sbjct: 180 RTPSRDSQKLTSRDSGPNGGFQSGGSYHPGRKRSKTQTPQQRSVSSQEEEHSSPVKAPSV 239
Query: 204 RNVPQNDPVTVVVLKATAPFKYESPENGKST 234
+ P D K P + +PEN S+
Sbjct: 240 KRTPMPD-------KTATPERPPAPENAPSS 263
>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
Length = 600
Score = 38.5 bits (88), Expect = 0.011
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 102 KKINQEEVGLAA---PAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKP 158
+K NQEE+G TA + SE P+ K+ ++ + R Q ++K
Sbjct: 10 EKENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKT 69
Query: 159 P--GPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVV 216
P GP+G TS+ P P+ SS+PS P ++ A PQ+D T V+
Sbjct: 70 PLGGPAGPETSSPA--PVSPREPSSSPS--PLAPARQDLAA--------PPQSDRTTSVI 117
Query: 217 LKATAPFK---YESPENGKSTMFHAT 239
+A P+ +S + +ST H +
Sbjct: 118 PEAGTPYPDPLEQSSDKRESTPHHTS 143
>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
Length = 716
Score = 38.5 bits (88), Expect = 0.011
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 102 KKINQEEVGLAA---PAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKP 158
+K NQEE+G TA + SE P+ K+ ++ + R Q ++K
Sbjct: 10 EKENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKT 69
Query: 159 P--GPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVV 216
P GP+G TS+ P P+ SS+PS P ++ A PQ+D T V+
Sbjct: 70 PLGGPAGPETSSPA--PVSPREPSSSPS--PLAPARQDLAA--------PPQSDRTTSVI 117
Query: 217 LKATAPFK---YESPENGKSTMFHAT 239
+A P+ +S + +ST H +
Sbjct: 118 PEAGTPYPDPLEQSSDKRESTPHHTS 143
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 38.1 bits (87), Expect = 0.014
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 82 LRKEKSKVAKKIKTQEKAPVKKINQEEVGLA-APAPTARNKLTSEARGRIPVAQKRKTPN 140
+R+ +S A K++ Q+++ A AP+ T + S+A + +K P
Sbjct: 1 MRRSRSSAAAKLRGQKRSGASAAPAASAAAALAPSATRTRRSASQAGSKSQAVEK---PP 57
Query: 141 KEKTEAKRNKVSQEQS---KPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQE 193
EK +R+ ++ +PP P A PP P T +S+ SN +E
Sbjct: 58 SEKPRLRRSSPRAQEEGPGEPPPPELALLPPPPPPPPTPATPTSSASNLDLGEQRE 113
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 37.7 bits (86), Expect = 0.019
Identities = 75/311 (24%), Positives = 111/311 (35%), Gaps = 46/311 (14%)
Query: 54 KKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEK-APVKKINQEEVGLA 112
K Q VA +A PS ++ L K+ + IKT+ K A VKK+ + V
Sbjct: 802 KSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTA----IKTEGKPAEVKKMTAKSV--- 854
Query: 113 APAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDH 172
PA +R K TS + +KT T V P PS ST+ +D
Sbjct: 855 -PADLSRPKSTS-------TSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDK 906
Query: 173 PPL-PQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQN------DPVTVVVLKATAPFKY 225
P + SS+TP + N + V ++ +N V K A
Sbjct: 907 KPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATT 966
Query: 226 ESPENGKSTMFHATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASS 285
PE+ T +AS + KV + V KKV S+C IK
Sbjct: 967 RKPESNAVTKTAGPIASAQKQPAGKV-------QIVSKKVSYSHIQSKCGSKDNIKHVPG 1019
Query: 286 VSDFNQNFEVPNRIIEIANKTPKISQ----LYKQASGTMVYGLFMLQKKSVHKKNTIYEI 341
N ++ N+ ++I+ + K +K G + K K N +
Sbjct: 1020 ----GGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDV--------KIESQKLNFKEKA 1067
Query: 342 QDNTGSMDVVG 352
Q GS+D VG
Sbjct: 1068 QAKVGSLDNVG 1078
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 37.7 bits (86), Expect = 0.019
Identities = 75/311 (24%), Positives = 111/311 (35%), Gaps = 46/311 (14%)
Query: 54 KKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEK-APVKKINQEEVGLA 112
K Q VA +A PS ++ L K+ + IKT+ K A VKK+ + V
Sbjct: 537 KSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTA----IKTEGKPAEVKKMTAKSV--- 589
Query: 113 APAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDH 172
PA +R K TS + +KT T V P PS ST+ +D
Sbjct: 590 -PADLSRPKSTS-------TSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDK 641
Query: 173 PPL-PQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQN------DPVTVVVLKATAPFKY 225
P + SS+TP + N + V ++ +N V K A
Sbjct: 642 KPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATT 701
Query: 226 ESPENGKSTMFHATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASS 285
PE+ T +AS + KV + V KKV S+C IK
Sbjct: 702 RKPESNAVTKTAGPIASAQKQPAGKV-------QIVSKKVSYSHIQSKCGSKDNIKHVPG 754
Query: 286 VSDFNQNFEVPNRIIEIANKTPKISQ----LYKQASGTMVYGLFMLQKKSVHKKNTIYEI 341
N ++ N+ ++I+ + K +K G + K K N +
Sbjct: 755 ----GGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDV--------KIESQKLNFKEKA 802
Query: 342 QDNTGSMDVVG 352
Q GS+D VG
Sbjct: 803 QAKVGSLDNVG 813
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sapiens]
Length = 1152
Score = 37.7 bits (86), Expect = 0.019
Identities = 75/311 (24%), Positives = 111/311 (35%), Gaps = 46/311 (14%)
Query: 54 KKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEK-APVKKINQEEVGLA 112
K Q VA +A PS ++ L K+ + IKT+ K A VKK+ + V
Sbjct: 802 KSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTA----IKTEGKPAEVKKMTAKSV--- 854
Query: 113 APAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDH 172
PA +R K TS + +KT T V P PS ST+ +D
Sbjct: 855 -PADLSRPKSTS-------TSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDK 906
Query: 173 PPL-PQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQN------DPVTVVVLKATAPFKY 225
P + SS+TP + N + V ++ +N V K A
Sbjct: 907 KPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATT 966
Query: 226 ESPENGKSTMFHATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASS 285
PE+ T +AS + KV + V KKV S+C IK
Sbjct: 967 RKPESNAVTKTAGPIASAQKQPAGKV-------QIVSKKVSYSHIQSKCGSKDNIKHVPG 1019
Query: 286 VSDFNQNFEVPNRIIEIANKTPKISQ----LYKQASGTMVYGLFMLQKKSVHKKNTIYEI 341
N ++ N+ ++I+ + K +K G + K K N +
Sbjct: 1020 ----GGNVQIQNKKVDISKVSSKCGSKANIKHKPGGGDV--------KIESQKLNFKEKA 1067
Query: 342 QDNTGSMDVVG 352
Q GS+D VG
Sbjct: 1068 QAKVGSLDNVG 1078
>gi|121114302 cullin 4B isoform 2 [Homo sapiens]
Length = 895
Score = 37.4 bits (85), Expect = 0.025
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Query: 110 GLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGA----- 164
G ++P+P+A + A + A T T AK+ K++ S S
Sbjct: 5 GFSSPSPSA-----AAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSNSSNEREDFD 59
Query: 165 STSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFK 224
STS++ PPL S++PS +SF A V ++ + D + V A K
Sbjct: 60 STSSSSSTPPLQPRDSASPSTSSFCLGVSVAASSHVPIQKKLRFEDTLEFVGFDA----K 115
Query: 225 YESPENGKSTMFHATVASKTQ 245
+ S+ T A+ Q
Sbjct: 116 MAEESSSSSSSSSPTAATSQQ 136
>gi|121114298 cullin 4B isoform 1 [Homo sapiens]
Length = 913
Score = 37.4 bits (85), Expect = 0.025
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Query: 110 GLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGA----- 164
G ++P+P+A + A + A T T AK+ K++ S S
Sbjct: 23 GFSSPSPSA-----AAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSNSSNEREDFD 77
Query: 165 STSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFK 224
STS++ PPL S++PS +SF A V ++ + D + V A K
Sbjct: 78 STSSSSSTPPLQPRDSASPSTSSFCLGVSVAASSHVPIQKKLRFEDTLEFVGFDA----K 133
Query: 225 YESPENGKSTMFHATVASKTQ 245
+ S+ T A+ Q
Sbjct: 134 MAEESSSSSSSSSPTAATSQQ 154
>gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]
Length = 878
Score = 36.6 bits (83), Expect = 0.042
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 80 NNLRKEKSKVAKKIKTQEKAPVKKINQEEVG--LAAPAPTARNKLTSEARGRIPVAQKRK 137
+NLR K+K KK + ++ V + Q+E+ L A + SE R + A+K+K
Sbjct: 437 DNLRISKAK--KKSEGLTQSMVDRCIQDEIVDFLTGVLTRAEGHMGSEPRDQD--AEKKK 492
Query: 138 TPNKEKTEAKRNKVSQEQSKPPGPSG---ASTSAAVDHPPLPQTSSSTPSNTSFTPNQET 194
P +V + S+P P+ AS S + D + + +S+P T T
Sbjct: 493 KPRDVARRDLAFEVPERGSRPASPAAKLPASPSGSEDLSSVSSSPTSSP-KTKVTTVTSA 551
Query: 195 QAQRQVDARRNVPQNDPVTVVVL---KATAPFKYESPENGK 232
Q Q+ + + + ++ T VL +A P E PE G+
Sbjct: 552 QKSSQIGSSQLLKRHVQRTEAVLTHKQAQVPISSEPPEEGE 592
>gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]
Length = 791
Score = 36.6 bits (83), Expect = 0.042
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 80 NNLRKEKSKVAKKIKTQEKAPVKKINQEEVG--LAAPAPTARNKLTSEARGRIPVAQKRK 137
+NLR K+K KK + ++ V + Q+E+ L A + SE R + A+K+K
Sbjct: 350 DNLRISKAK--KKSEGLTQSMVDRCIQDEIVDFLTGVLTRAEGHMGSEPRDQD--AEKKK 405
Query: 138 TPNKEKTEAKRNKVSQEQSKPPGPSG---ASTSAAVDHPPLPQTSSSTPSNTSFTPNQET 194
P +V + S+P P+ AS S + D + + +S+P T T
Sbjct: 406 KPRDVARRDLAFEVPERGSRPASPAAKLPASPSGSEDLSSVSSSPTSSP-KTKVTTVTSA 464
Query: 195 QAQRQVDARRNVPQNDPVTVVVL---KATAPFKYESPENGK 232
Q Q+ + + + ++ T VL +A P E PE G+
Sbjct: 465 QKSSQIGSSQLLKRHVQRTEAVLTHKQAQVPISSEPPEEGE 505
>gi|109637791 transcription factor-like nuclear regulator [Homo
sapiens]
Length = 2624
Score = 36.6 bits (83), Expect = 0.042
Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 20/136 (14%)
Query: 79 VNNLRKEKSKVAKKIKTQ-----EKAPVKKINQEEVGLAAPAPTA---RNKLTSEARGRI 130
V+ RK S + +K+ E P+ INQE AP PTA + K R RI
Sbjct: 91 VSQRRKRISSTSSLVKSSVSVPSESHPLSTINQE-----APQPTATSTKEKQPCSDRYRI 145
Query: 131 PVAQK-----RKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPP--LPQTSSSTP 183
AQK ++ KEK + K E +PP S + + + P P TSS
Sbjct: 146 YKAQKLREMLKEELRKEKKQWKNKYAINESQRPPDRSKMTMRDFIYYLPDNNPMTSSLEQ 205
Query: 184 SNTSFTPNQETQAQRQ 199
+ P+ Q + Q
Sbjct: 206 EKKTEKPSTPVQTREQ 221
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 36.2 bits (82), Expect = 0.055
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 14/130 (10%)
Query: 84 KEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEK 143
KEK+ AK+ ++ EK K + LA P P K + +G K TP K
Sbjct: 167 KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTP----KAETTTKGPALTTPKEPTPTTPK 222
Query: 144 TEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDAR 203
A K P P+ ++ P P T+ S P+ TP + + A
Sbjct: 223 EPASTT------PKEPTPTTIKSAPTTPKEPAPTTTKSAPT----TPKEPAPTTTKEPAP 272
Query: 204 RNVPQNDPVT 213
+ P T
Sbjct: 273 TTPKEPAPTT 282
Score = 33.1 bits (74), Expect = 0.46
Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 14/137 (10%)
Query: 96 QEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPN----------KEKTE 145
+E AP PAPT + + + P A K+ P KE
Sbjct: 315 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 374
Query: 146 AKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRN 205
+ S K P P+ ++ P P T+ S P+ TP + + + A
Sbjct: 375 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT----TPKEPSPTTTKEPAPTT 430
Query: 206 VPQNDPVTVVVLKATAP 222
+ P T T P
Sbjct: 431 PKEPAPTTPKKPAPTTP 447
Score = 30.0 bits (66), Expect = 3.9
Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 3/120 (2%)
Query: 95 TQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQE 154
T+E AP PAPT + + P K+ P K A
Sbjct: 267 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 326
Query: 155 QSKPPGPSGASTSAAVDHPPLP-QTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVT 213
+ P P+ + A P P T+ P+ T TP + + A + P T
Sbjct: 327 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT--TPKEPAPTTPKEPAPTTTKEPSPTT 384
Score = 29.3 bits (64), Expect = 6.7
Identities = 36/155 (23%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 86 KSKVAKKIKTQEKAPVKKINQEEVGLAA--------PAPTARNKLTSEARGRIPVAQKRK 137
K AK I + P +E L T NK TS G+ ++
Sbjct: 117 KITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTS-TDGKEKTTSAKE 175
Query: 138 TPNKEKTEAKRNKVSQEQSKPPGPSGASTS--AAVDHP--PLPQTSSSTPSNTSFTPNQE 193
T + EKT AK + + P P +T+ A+ P P P T S T P
Sbjct: 176 TQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT 235
Query: 194 TQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESP 228
T + P K AP + P
Sbjct: 236 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP 270
Score = 28.9 bits (63), Expect = 8.7
Identities = 30/127 (23%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 95 TQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIP---VAQKRKTPNKEKTEAKRNKV 151
TQ+ P K + LA T + +T+ P K + N + T K K
Sbjct: 831 TQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKP 890
Query: 152 SQEQSKPPGPSGASTSAAVDHP---PLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQ 208
++ KP T V P P P+ +ST + T ++ +A Q R N
Sbjct: 891 TKAPKKPTSTKKPKTMPRVRKPKTTPTPRKMTSTMPELNPT-SRIAEAMLQTTTRPNQTP 949
Query: 209 NDPVTVV 215
N + V
Sbjct: 950 NSKLVEV 956
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 36.2 bits (82), Expect = 0.055
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 14/130 (10%)
Query: 84 KEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEK 143
KEK+ AK+ ++ EK K + LA P P K + +G K TP K
Sbjct: 208 KEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTP----KAETTTKGPALTTPKEPTPTTPK 263
Query: 144 TEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDAR 203
A K P P+ ++ P P T+ S P+ TP + + A
Sbjct: 264 EPASTT------PKEPTPTTIKSAPTTPKEPAPTTTKSAPT----TPKEPAPTTTKEPAP 313
Query: 204 RNVPQNDPVT 213
+ P T
Sbjct: 314 TTPKEPAPTT 323
Score = 33.1 bits (74), Expect = 0.46
Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 14/137 (10%)
Query: 96 QEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPN----------KEKTE 145
+E AP PAPT + + + P A K+ P KE
Sbjct: 356 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 415
Query: 146 AKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRN 205
+ S K P P+ ++ P P T+ S P+ TP + + + A
Sbjct: 416 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT----TPKEPSPTTTKEPAPTT 471
Query: 206 VPQNDPVTVVVLKATAP 222
+ P T T P
Sbjct: 472 PKEPAPTTPKKPAPTTP 488
Score = 30.0 bits (66), Expect = 3.9
Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 3/120 (2%)
Query: 95 TQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQE 154
T+E AP PAPT + + P K+ P K A
Sbjct: 308 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 367
Query: 155 QSKPPGPSGASTSAAVDHPPLP-QTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVT 213
+ P P+ + A P P T+ P+ T TP + + A + P T
Sbjct: 368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPT--TPKEPAPTTPKEPAPTTTKEPSPTT 425
Score = 29.3 bits (64), Expect = 6.7
Identities = 36/155 (23%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 86 KSKVAKKIKTQEKAPVKKINQEEVGLAA--------PAPTARNKLTSEARGRIPVAQKRK 137
K AK I + P +E L T NK TS G+ ++
Sbjct: 158 KITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTS-TDGKEKTTSAKE 216
Query: 138 TPNKEKTEAKRNKVSQEQSKPPGPSGASTS--AAVDHP--PLPQTSSSTPSNTSFTPNQE 193
T + EKT AK + + P P +T+ A+ P P P T S T P
Sbjct: 217 TQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT 276
Query: 194 TQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESP 228
T + P K AP + P
Sbjct: 277 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP 311
Score = 28.9 bits (63), Expect = 8.7
Identities = 30/127 (23%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 95 TQEKAPVKKINQEEVGLAAPAPTARNKLTSEARGRIP---VAQKRKTPNKEKTEAKRNKV 151
TQ+ P K + LA T + +T+ P K + N + T K K
Sbjct: 872 TQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKP 931
Query: 152 SQEQSKPPGPSGASTSAAVDHP---PLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQ 208
++ KP T V P P P+ +ST + T ++ +A Q R N
Sbjct: 932 TKAPKKPTSTKKPKTMPRVRKPKTTPTPRKMTSTMPELNPT-SRIAEAMLQTTTRPNQTP 990
Query: 209 NDPVTVV 215
N + V
Sbjct: 991 NSKLVEV 997
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,737,072
Number of Sequences: 37866
Number of extensions: 661171
Number of successful extensions: 4572
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 267
Number of HSP's that attempted gapping in prelim test: 4041
Number of HSP's gapped (non-prelim): 702
length of query: 407
length of database: 18,247,518
effective HSP length: 105
effective length of query: 302
effective length of database: 14,271,588
effective search space: 4310019576
effective search space used: 4310019576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.