Search of human proteins with 4504727

Search of human proteins with 4504727

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504727 interferon regulatory factor 5 isoform a [Homo
sapiens]
         (504 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]   1060   0.0  
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi...  1051   0.0  
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi...  1016   0.0  
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi...  1016   0.0  
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi...  1016   0.0  
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi...  1013   0.0  
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]  1013   0.0  
gi|5453700 interferon regulatory factor 6 [Homo sapiens]              450   e-126
gi|167555104 interferon regulatory factor 4 [Homo sapiens]            205   7e-53
gi|4504567 interferon regulatory factor 8 [Homo sapiens]              196   3e-50
gi|4504725 interferon regulatory factor 3 [Homo sapiens]              171   2e-42
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]   166   6e-41
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]    166   6e-41
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]    158   1e-38
gi|25282407 interferon-stimulated transcription factor 3, gamma ...   144   2e-34
gi|153082752 interferon regulatory factor 2 [Homo sapiens]            114   2e-25
gi|4504721 interferon regulatory factor 1 [Homo sapiens]              109   7e-24
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         52   2e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    49   1e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    48   2e-05
gi|31652264 RNA binding motif protein 26 [Homo sapiens]                47   3e-05
gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ...    46   7e-05
gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]           46   9e-05
gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]           46   9e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 46   9e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    44   3e-04
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi...    44   3e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          43   6e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          43   6e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          43   6e-04

>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
          Length = 504

 Score = 1060 bits (2740), Expect = 0.0
 Identities = 504/504 (100%), Positives = 504/504 (100%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180

Query: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240
           WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
Sbjct: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240

Query: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300
           LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
Sbjct: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300

Query: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360
           EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
Sbjct: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360

Query: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420
           DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
Sbjct: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420

Query: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480
           TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
Sbjct: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480

Query: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504
           AQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504


>gi|148833494 interferon regulatory factor 5 isoform d [Homo
           sapiens]
          Length = 514

 Score = 1051 bits (2719), Expect = 0.0
 Identities = 504/514 (98%), Positives = 504/514 (98%), Gaps = 10/514 (1%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180

Query: 181 WPPTLQPPTL----------QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 230
           WPPTLQPPTL          QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP
Sbjct: 181 WPPTLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP 240

Query: 231 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 290
           ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE
Sbjct: 241 ASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQE 300

Query: 291 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 350
           QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV
Sbjct: 301 QVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKV 360

Query: 351 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 410
           FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP
Sbjct: 361 FWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWP 420

Query: 411 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 470
           DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI
Sbjct: 421 DRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHI 480

Query: 471 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 504
           WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 481 WQSQQRLQPVAQAPPGAGLGVGQGPWPMHPAGMQ 514


>gi|148833515 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 488/504 (96%), Positives = 488/504 (96%), Gaps = 16/504 (3%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240
           WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
Sbjct: 165 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 224

Query: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300
           LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
Sbjct: 225 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 284

Query: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360
           EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
Sbjct: 285 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 344

Query: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420
           DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
Sbjct: 345 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 404

Query: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480
           TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
Sbjct: 405 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 464

Query: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504
           AQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 465 AQAPPGAGLGVGQGPWPMHPAGMQ 488


>gi|148833492 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 488/504 (96%), Positives = 488/504 (96%), Gaps = 16/504 (3%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240
           WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
Sbjct: 165 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 224

Query: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300
           LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
Sbjct: 225 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 284

Query: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360
           EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
Sbjct: 285 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 344

Query: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420
           DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
Sbjct: 345 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 404

Query: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480
           TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
Sbjct: 405 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 464

Query: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504
           AQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 465 AQAPPGAGLGVGQGPWPMHPAGMQ 488


>gi|148833488 interferon regulatory factor 5 isoform c [Homo
           sapiens]
          Length = 488

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 488/504 (96%), Positives = 488/504 (96%), Gaps = 16/504 (3%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT                EDVK
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT----------------EDVK 164

Query: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240
           WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
Sbjct: 165 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 224

Query: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300
           LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
Sbjct: 225 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 284

Query: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360
           EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
Sbjct: 285 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 344

Query: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420
           DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
Sbjct: 345 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 404

Query: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480
           TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
Sbjct: 405 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 464

Query: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504
           AQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 465 AQAPPGAGLGVGQGPWPMHPAGMQ 488


>gi|148833496 interferon regulatory factor 5 isoform b [Homo
           sapiens]
          Length = 498

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 487/504 (96%), Positives = 491/504 (97%), Gaps = 6/504 (1%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT+ V+  P + P +L      
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLR----- 175

Query: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240
            PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
Sbjct: 176 -PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 234

Query: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300
           LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
Sbjct: 235 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 294

Query: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360
           EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
Sbjct: 295 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 354

Query: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420
           DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
Sbjct: 355 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 414

Query: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480
           TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
Sbjct: 415 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 474

Query: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504
           AQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 475 AQAPPGAGLGVGQGPWPMHPAGMQ 498


>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
          Length = 498

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 487/504 (96%), Positives = 491/504 (97%), Gaps = 6/504 (1%)

Query: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60
           MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD
Sbjct: 1   MNQSIPVAPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGD 60

Query: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
Sbjct: 61  NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120

Query: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLT+ V+  P + P +L      
Sbjct: 121 CSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTEDVKWPPTLQPPTLR----- 175

Query: 181 WPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 240
            PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL
Sbjct: 176 -PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQL 234

Query: 241 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 300
           LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL
Sbjct: 235 LPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISL 294

Query: 301 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 360
           EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH
Sbjct: 295 EQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAH 354

Query: 361 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 420
           DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI
Sbjct: 355 DSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLI 414

Query: 421 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 480
           TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV
Sbjct: 415 TVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPV 474

Query: 481 AQAPPGAGLGVGQGPWPMHPAGMQ 504
           AQAPPGAGLGVGQGPWPMHPAGMQ
Sbjct: 475 AQAPPGAGLGVGQGPWPMHPAGMQ 498


>gi|5453700 interferon regulatory factor 6 [Homo sapiens]
          Length = 467

 Score =  450 bits (1157), Expect = e-126
 Identities = 245/489 (50%), Positives = 312/489 (63%), Gaps = 53/489 (10%)

Query: 12  PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
           PRRVRLKPWLVAQV+S  YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 5   PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64

Query: 72  GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS- 130
           GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P  P KIY+VC   P P  S 
Sbjct: 65  GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDI-PQPQGSI 123

Query: 131 -------QPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPP 183
                    P D      +EE+EE+EL +    + + D         P+  +        
Sbjct: 124 INPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTF-------PFLNI-------- 168

Query: 184 TLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQLL 241
                             + SP+AP             E + P   PL   +P A  Q  
Sbjct: 169 ------------------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPF 210

Query: 242 ---PDLLISPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELFGP 297
              P+L IS   LP+TDL+IKFQYRG+   + +T+SNP GCRLFY  L    +Q ELFGP
Sbjct: 211 YSSPELWISS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGP 268

Query: 298 ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA 357
           +SLEQV+FP PE I ++KQ+ +T++LLDV+DRGLIL++ G  +YAIRLCQCKV+WSGPCA
Sbjct: 269 VSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCA 328

Query: 358 SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK 417
            +    PN I+R+ K KLF LE FL++LI  QKGQ    PPFEI+ CFGEEWPD KP E+
Sbjct: 329 PSL-VAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLER 387

Query: 418 KLITVQVVPVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQSQQ 475
           KLI VQV+PV AR++ EMFSG+ + S D  S+RLQIS PD+KD +V Q K+L+ I Q+Q+
Sbjct: 388 KLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQE 447

Query: 476 RLQPVAQAP 484
             QP+   P
Sbjct: 448 SWQPMQPTP 456


>gi|167555104 interferon regulatory factor 4 [Homo sapiens]
          Length = 451

 Score =  205 bits (522), Expect = 7e-53
 Identities = 153/461 (33%), Positives = 218/461 (47%), Gaps = 66/461 (14%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           +L+ WL+ Q++S +YPGL W N EK +F IPW+HA +   +++ D  +FKAWA   GK+ 
Sbjct: 23  KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 82

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135
           EG+D+ DP  WK  LRCALNKS DF  + +  +     PYK+Y +            PE 
Sbjct: 83  EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV-----------PEG 131

Query: 136 YSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPV- 194
              GA +              L+L D   S  H  PY++       P       + PP+ 
Sbjct: 132 AKKGAKQ--------------LTLEDPQMSMSH--PYTMTTPYPSLPAQQVHNYMMPPLD 175

Query: 195 ------VLGPPAPDPSPLAPPPGNPAGFR----ELLSEVLEPGPLPASLPPAGEQLLPDL 244
                 V   P P+     P    P G         +     G   A  PP  E   P +
Sbjct: 176 RSWRDYVPDQPHPEIPYQCPMTFGPRGHHWQGPACENGCQVTGTFYACAPP--ESQAPGV 233

Query: 245 LISPHM-----LPLTD--LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGP 297
              P +     L  +D  L I   YR    + LT S+P GCR+ +            +  
Sbjct: 234 PTEPSIRSAEALAFSDCRLHICLYYREILVKELTTSSPEGCRISHGHT---------YDA 284

Query: 298 ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA 357
            +L+QV FP PED   + QR    +LL  L+RG++L +    LYA RLCQ +++W GP A
Sbjct: 285 SNLDQVLFPYPED---NGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLA 341

Query: 358 SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK 417
             +D  PN ++R+   KLF  + FL+EL  F      + P F++  CFGEE+PD + R++
Sbjct: 342 LCNDR-PNKLERDQTCKLFDTQQFLSELQAFAH-HGRSLPRFQVTLCFGEEFPDPQ-RQR 398

Query: 418 KLITVQVVPVAARLL---LEMFSGELSWSADSIRLQISNPD 455
           KLIT  V P+ AR L    +  SG      D +   ISNP+
Sbjct: 399 KLITAHVEPLLARQLYYFAQQNSGHFLRGYD-LPEHISNPE 438


>gi|4504567 interferon regulatory factor 8 [Homo sapiens]
          Length = 426

 Score =  196 bits (499), Expect = 3e-50
 Identities = 148/425 (34%), Positives = 197/425 (46%), Gaps = 60/425 (14%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           RL+ WL+ Q++S  YPGL W N EK +F IPW+HA +   +Q+ D +IFKAWA   GK+ 
Sbjct: 9   RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPED 135
           EG D+A+PA WK  LRCALNKS DF  + D  +    +PYK+Y +      P + Q  + 
Sbjct: 69  EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRI-----VPEEEQKCKL 122

Query: 136 YSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVV 195
               AG   E  E    M    S  D +   P +  Y                       
Sbjct: 123 GVATAGCVNEVTE----MECGRSEIDELIKEPSVDDY----------------------- 155

Query: 196 LGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP---ASLPPAGEQLLPD-LLISPHML 251
           +G     PSP       P   R  L        LP   A  P  G  L+        H  
Sbjct: 156 MGMIKRSPSP-------PEACRSQL--------LPDWWAQQPSTGVPLVTGYTTYDAHHS 200

Query: 252 PLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQ--LEATQEQVELFGPISLEQVRFPSPE 309
             + + I F Y G+     T + P GCRL  SQ  L  T    +L+GP  LE VRFP  +
Sbjct: 201 AFSQMVISFYYGGKLVGQATTTCPEGCRLSLSQPGLPGT----KLYGPEGLELVRFPPAD 256

Query: 310 DIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQR 369
            IPS++QR  T +L   L+RG++L    Q ++  RLCQ +VF SG  A      PN ++R
Sbjct: 257 AIPSERQRQVTRKLFGHLERGVLLHSSRQGVFVKRLCQGRVFCSGN-AVVCKGRPNKLER 315

Query: 370 EVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAA 429
           +   ++F    F  EL  F   Q   P    +  CFGEE+PD  P   KLI VQ+  +  
Sbjct: 316 DEVVQVFDTSQFFRELQQFYNSQGRLPDG-RVVLCFGEEFPDMAPLRSKLILVQIEQLYV 374

Query: 430 RLLLE 434
           R L E
Sbjct: 375 RQLAE 379


>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
          Length = 427

 Score =  171 bits (432), Expect = 2e-42
 Identities = 143/462 (30%), Positives = 204/462 (44%), Gaps = 71/462 (15%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           R+ PWLV+Q++  Q  G+ WVN  +  F IPW+H  R    Q+ D  IF+AWA+ TG Y 
Sbjct: 7   RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPE- 134
            G D+ D   WK N R ALN+    RL  D  +D P  P+KIYE  ++G     SQP   
Sbjct: 66  PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNSGVGDF-SQPDTS 123

Query: 135 -DYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPP 193
            D + G    + +E+ L  +L ++ L      GP                         P
Sbjct: 124 PDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGP-------------------------P 158

Query: 194 VVLGPPAPDPSPLAPPP-GNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLP 252
            +   P P P PL  P   NP  F  L        PL   L P  E              
Sbjct: 159 SLAVAPEPCPQPLRSPSLDNPTPFPNLGPS---ENPLKRLLVPGEEW------------- 202

Query: 253 LTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIP 312
             + E+   YRGR     TIS P G RL  S++    ++     P++L     P P    
Sbjct: 203 --EFEVTAFYRGRQVFQQTISCPEGLRLVGSEVG---DRTLPGWPVTL-----PDPGMSL 252

Query: 313 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 366
           +D+    Y   +L  L  GL L   GQ L+A RL  C  +W    A + +  PN      
Sbjct: 253 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 308

Query: 367 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 424
             + ++ +  +F L  F+ +LI F +G   +P  + ++FC GE WP  +P  K+L+ V+V
Sbjct: 309 GEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKV 367

Query: 425 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 465
           VP   R L+EM   G  S   +++ L ISN        +Q+K
Sbjct: 368 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 409


>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
          Length = 516

 Score =  166 bits (419), Expect = 6e-41
 Identities = 146/496 (29%), Positives = 208/496 (41%), Gaps = 84/496 (16%)

Query: 14  RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
           RV    WL+ +++S  Y GLQW++  +  F +PW+H  R   S+  D  IFKAWA   G+
Sbjct: 24  RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 82

Query: 74  YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY----EV 120
           +             + A+ A WK N RCAL  +R F ++ D   D P  P+K+Y    E+
Sbjct: 83  WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 141

Query: 121 C-SNGP--------APTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTP 171
           C   GP        AP    PP+    G               P L+ T A    P   P
Sbjct: 142 CWREGPGTDQTEAEAPAAVPPPQGGPPG---------------PFLAHTHAGLQAPGPLP 186

Query: 172 YSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPP----------------PGNPAG 215
                +       +Q   L   ++      DP P   P                PG PAG
Sbjct: 187 APAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAG 246

Query: 216 FRELLSEVLE----PGPLPASL-------PPAGEQLLPDLLISPHMLPLTD------LEI 258
             EL    +E    PGP PA+L       P +  Q  P L  SP             L++
Sbjct: 247 --ELYGWAVETTPSPGPQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDV 304

Query: 259 KFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRF 318
              Y+GR      + +P  C   Y   +      +       +QV FPSP ++P  KQ  
Sbjct: 305 TIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDP------QQVAFPSPAELPDQKQLR 357

Query: 319 YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFW--SGPCASAHDSCPN-PIQREVKTKL 375
           YT +LL  +  GL L+L+G  L+A R+ +CKV+W   GP  SA  S P   + R   T +
Sbjct: 358 YTEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPI 417

Query: 376 FSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEM 435
           F    F  EL+ F+  Q    P + I+  FG++    +P+EK L+ V++ P   R+ LE 
Sbjct: 418 FDFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEG 477

Query: 436 FSGELSWSADSIRLQI 451
              E   S DS  L +
Sbjct: 478 TQREGVSSLDSSSLSL 493


>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
          Length = 503

 Score =  166 bits (419), Expect = 6e-41
 Identities = 146/496 (29%), Positives = 208/496 (41%), Gaps = 84/496 (16%)

Query: 14  RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
           RV    WL+ +++S  Y GLQW++  +  F +PW+H  R   S+  D  IFKAWA   G+
Sbjct: 11  RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 69

Query: 74  YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY----EV 120
           +             + A+ A WK N RCAL  +R F ++ D   D P  P+K+Y    E+
Sbjct: 70  WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 128

Query: 121 C-SNGP--------APTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTP 171
           C   GP        AP    PP+    G               P L+ T A    P   P
Sbjct: 129 CWREGPGTDQTEAEAPAAVPPPQGGPPG---------------PFLAHTHAGLQAPGPLP 173

Query: 172 YSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPP----------------PGNPAG 215
                +       +Q   L   ++      DP P   P                PG PAG
Sbjct: 174 APAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAG 233

Query: 216 FRELLSEVLE----PGPLPASL-------PPAGEQLLPDLLISPHMLPLTD------LEI 258
             EL    +E    PGP PA+L       P +  Q  P L  SP             L++
Sbjct: 234 --ELYGWAVETTPSPGPQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDV 291

Query: 259 KFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRF 318
              Y+GR      + +P  C   Y   +      +       +QV FPSP ++P  KQ  
Sbjct: 292 TIMYKGRTVLQKVVGHP-SCTFLYGPPDPAVRATDP------QQVAFPSPAELPDQKQLR 344

Query: 319 YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFW--SGPCASAHDSCPN-PIQREVKTKL 375
           YT +LL  +  GL L+L+G  L+A R+ +CKV+W   GP  SA  S P   + R   T +
Sbjct: 345 YTEELLRHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPI 404

Query: 376 FSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEM 435
           F    F  EL+ F+  Q    P + I+  FG++    +P+EK L+ V++ P   R+ LE 
Sbjct: 405 FDFRVFFQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEG 464

Query: 436 FSGELSWSADSIRLQI 451
              E   S DS  L +
Sbjct: 465 TQREGVSSLDSSSLSL 480


>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
          Length = 474

 Score =  158 bits (400), Expect = 1e-38
 Identities = 136/469 (28%), Positives = 198/469 (42%), Gaps = 59/469 (12%)

Query: 14  RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
           RV    WL+ +++S  Y GLQW++  +  F +PW+H  R   S+  D  IFKAWA   G+
Sbjct: 11  RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 69

Query: 74  YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY----EV 120
           +             + A+ A WK N RCAL  +R F ++ D   D P  P+K+Y    E+
Sbjct: 70  WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 128

Query: 121 C-SNGP--------APTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTP 171
           C   GP        AP    PP+    G               P L+ T A    P   P
Sbjct: 129 CWREGPGTDQTEAEAPAAVPPPQGGPPG---------------PFLAHTHAGLQAPGPLP 173

Query: 172 YSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA 231
                +       +Q   L   ++      DP P   P     G    L+     G   A
Sbjct: 174 APAGDKGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLP--LTGACAGGE--A 229

Query: 232 SLPPAGEQLLPDLLISPHMLPLTD------LEIKFQYRGRPPRALTISNPHGCRLFYSQL 285
           + P +  Q  P L  SP             L++   Y+GR      + +P  C   Y   
Sbjct: 230 AAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGRTVLQKVVGHP-SCTFLYGPP 288

Query: 286 EATQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRL 345
           +      +       +QV FPSP ++P  KQ  YT +LL  +  GL L+L+G  L+A R+
Sbjct: 289 DPAVRATDP------QQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLELRGPQLWARRM 342

Query: 346 CQCKVFW--SGPCASAHDSCPN-PIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIF 402
            +CKV+W   GP  SA  S P   + R   T +F    F  EL+ F+  Q    P + I+
Sbjct: 343 GKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRARQRRGSPRYTIY 402

Query: 403 FCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQI 451
             FG++    +P+EK L+ V++ P   R+ LE    E   S DS  L +
Sbjct: 403 LGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSLDSSSLSL 451


>gi|25282407 interferon-stimulated transcription factor 3, gamma
           48kDa [Homo sapiens]
          Length = 393

 Score =  144 bits (362), Expect = 2e-34
 Identities = 121/425 (28%), Positives = 182/425 (42%), Gaps = 61/425 (14%)

Query: 16  RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
           +L+ W+V QV S Q+PG+ W +  K +F IPW+HA +    +D D   FKAWA   GKY 
Sbjct: 11  KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70

Query: 76  EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYE-----VCSNGPAPTDS 130
           EG D   PA WK  LRCALNKS +F+ + +  R    +PYK+Y+     + S  P     
Sbjct: 71  EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKV 129

Query: 131 QPPEDYSFGAGEEEEEEEELQRMLPSLS-LTDAVQSGPHMTPYSLLKEDVKWPPTLQPPT 189
                +S  + E +EEE+ +Q    S S L D++ +         +  D+          
Sbjct: 130 PSKRQHSSVSSERKEEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDI---------- 179

Query: 190 LQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPH 249
                         S  +P P           EV +        P  G+Q   + L+ P 
Sbjct: 180 ----------GSSSSSSSPEP----------QEVTD----TTEAPFQGDQRSLEFLLPPE 215

Query: 250 MLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPE 309
             P   L + F Y GR      + +   CRL      +           S+EQV FP P 
Sbjct: 216 --PDYSLLLTFIYNGRVVGEAQVQS-LDCRLVAEPSGSES---------SMEQVLFPKPG 263

Query: 310 DIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNPIQR 369
            +        T +LL  L+RG+++    + L+  RLC   + W+ P A      P+ +  
Sbjct: 264 PLEP------TQRLLSQLERGILVASNPRGLFVQRLCPIPISWNAPQAPPGPG-PHLLPS 316

Query: 370 EVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAA 429
               +LF   +F  +L+ + +G    PP F++   F EE        + LITV++    A
Sbjct: 317 NECVELFRTAYFCRDLVRYFQG-LGPPPKFQVTLNFWEESHGSSHTPQNLITVKMEQAFA 375

Query: 430 RLLLE 434
           R LLE
Sbjct: 376 RYLLE 380


>gi|153082752 interferon regulatory factor 2 [Homo sapiens]
          Length = 349

 Score =  114 bits (286), Expect = 2e-25
 Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 11/173 (6%)

Query: 11  PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
           P  R+R++PWL  Q+NS   PGL+W+N EKK+F IPW HA RHG   + D  +F+ WA  
Sbjct: 2   PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61

Query: 71  TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
           TGK+  GVD+ DP  WKAN RCA+N   D   + D         +++Y +      P   
Sbjct: 62  TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116

Query: 131 QPPEDYSFGAGEEEEEEEELQR--MLPSLSLTDAVQSGPHMTP-YSLLKEDVK 180
           +P +       E+E++ + +++  +  SL L++ V     ++P Y++L   +K
Sbjct: 117 RPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSD---LSPEYAVLTSTIK 166


>gi|4504721 interferon regulatory factor 1 [Homo sapiens]
          Length = 325

 Score =  109 bits (272), Expect = 7e-24
 Identities = 47/110 (42%), Positives = 67/110 (60%)

Query: 11  PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
           P  R+R++PWL  Q+NS Q PGL W+N E+ +F IPW+HA +HG   + D  +F++WA  
Sbjct: 2   PITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIH 61

Query: 71  TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
           TG+Y  G  E DP  WKAN RCA+N   D   + D  R+      ++Y +
Sbjct: 62  TGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRM 111


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 23/93 (24%)

Query: 176 KEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLE---------- 225
           +E+ K PP L PP   PP+   PP   P P  PPP +PA   + L+ VLE          
Sbjct: 766 EEEKKPPPALPPP---PPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTG 822

Query: 226 ------PGPLPASL----PPAGEQLLPDLLISP 248
                 PGPLP +     PP+G   LP    +P
Sbjct: 823 AAVSTRPGPLPTTQYSPGPPSGATALPPTSAAP 855



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 36/145 (24%), Positives = 51/145 (35%), Gaps = 25/145 (17%)

Query: 106 GPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQS 165
           GP   PP PY    +      P+ +Q P+D                   P + LT A+  
Sbjct: 567 GPVSFPPPPYLARSIDPLPRPPSPAQNPQD------------------PPLVPLTLALPP 608

Query: 166 GPHMTPYSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGN-PAGFRELLSE-- 222
            P  + +       + P + +P    P      P P P PL+  P   P G  EL +   
Sbjct: 609 APPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELPARGP 668

Query: 223 ---VLEPGPLPASL-PPAGEQLLPD 243
                 P PL      PA  ++LPD
Sbjct: 669 RLFDFPPTPLEDQFEEPAEFKILPD 693


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
           sapiens]
          Length = 5537

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 52/161 (32%), Positives = 68/161 (42%), Gaps = 24/161 (14%)

Query: 110 MPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEE-----EEELQRMLPSLSLTDAVQ 164
           +P +P+    +      P  S  PE+       EE       EE      P  S      
Sbjct: 782 VPEEPH----LSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQS 837

Query: 165 SGPHMTPY---SLLKEDVKWPPTLQPPTLQPPVVLGP-PAPDPSPLAPPPGNPAGFRELL 220
             P ++P    S L  +++ PP L P   +PP   G  PAP+  PL PPPG P+    LL
Sbjct: 838 EEPCLSPRPEESHLSPELEKPP-LSPRPEKPPEEPGQCPAPEELPLFPPPGEPS-LSPLL 895

Query: 221 SE--VLEPG-----PLPASLP--PAGEQLLPDLLISPHMLP 252
            E  + EPG     PLP  LP  P+GE  L   L+ P  LP
Sbjct: 896 GEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLP 936



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 48/164 (29%), Positives = 64/164 (39%), Gaps = 23/164 (14%)

Query: 97  SRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQ---PPEDYSFGAGEEEEEEE---EL 150
           SR F    + P   PP+   +       P P  S+   PPED       EE       E+
Sbjct: 597 SRLFPPFEESPLSPPPEESPL------SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEV 650

Query: 151 QRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVVLGP--PAPDPSPLAP 208
            R+ P L +   +   P  +P S   E+    P  +   L PP    P  P P+ SP +P
Sbjct: 651 SRLSP-LPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASP 709

Query: 209 PPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLP 252
           PP +      L+S  LE  PL   LP   E  L      PH+ P
Sbjct: 710 PPED-----SLMSLPLEESPL---LPLPEEPQLCPRSEGPHLSP 745



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 52/194 (26%), Positives = 76/194 (39%), Gaps = 29/194 (14%)

Query: 92  CALNKSRDFRLIYDGPRDMPPQPYKIY-----EVCSNGPAPTDS----QPPEDYSFGAGE 142
           CA+ +        +GP  + PQP +++     E     P P +     QP E +     E
Sbjct: 780 CAVPEEPHLSPQAEGPH-LSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSE 838

Query: 143 E-----EEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVVLG 197
           E       EE  L   L    L+   +  P         E++   P    P+L P  +LG
Sbjct: 839 EPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSP--LLG 896

Query: 198 PPA---PDPSPLAPPPG----NPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHM 250
            PA   P   PL+P P     +P+G   L  +++ P PLP  L P      P     P +
Sbjct: 897 EPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAP-----PAL 951

Query: 251 LPLTDLEIKFQYRG 264
            PL +LE  F  +G
Sbjct: 952 SPLGELEYPFGAKG 965



 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 47/168 (27%), Positives = 63/168 (37%), Gaps = 22/168 (13%)

Query: 107 PRDMPPQPY-------KIYEVCSNGPAPTDS--QPPEDYSFGAGEEEEEEEELQRMLPSL 157
           P ++P  P        +  E     P P +S   PP + S  +  EE      +   PS 
Sbjct: 471 PEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSP 530

Query: 158 SLTDAVQSGPHMTPYSL-LKEDVKWPPTLQPPTLQPPVV--LGPPA--------PDPSPL 206
           +L   +   P  +P S   +E    PP  + PT  PP    L PP         P+ SP+
Sbjct: 531 ALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPM 590

Query: 207 APPPGNPAGFRELLSEVLEPGP--LPASLPPAGEQLLPDLLISPHMLP 252
           +PPP     F       L P P   P S PP   +L P    SP   P
Sbjct: 591 SPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPP 638



 Score = 37.0 bits (84), Expect = 0.042
 Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 26/142 (18%)

Query: 118  YEVC-SNGPAPTDSQPPEDYSFGAGEEEE--EEEELQRMLPSLSLTDAVQSG----PHMT 170
            YEV     PA   ++P +  + G G +E+  E +        L   DAV  G      + 
Sbjct: 4815 YEVLFPESPARAGTEPKKGEAEGPGGKEKGLEGKSPDTGPDWLKQFDAVLPGYTLKSQLD 4874

Query: 171  PYSLLKEDVKWPPTLQPPT----------LQPPVVLGPP----APDPSPLAPPPGNP--A 214
              SLLK++    P  +PPT          L    +  PP    +P PSPLAP P +P   
Sbjct: 4875 ILSLLKQE---SPAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPASPPTE 4931

Query: 215  GFRELLSEVLEPGPLPASLPPA 236
               EL +E L   P+P+ LP A
Sbjct: 4932 PLVELPTEPLAEPPVPSPLPLA 4953



 Score = 34.3 bits (77), Expect = 0.27
 Identities = 44/147 (29%), Positives = 60/147 (40%), Gaps = 20/147 (13%)

Query: 139  GAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQ------- 191
            GAG   +    L     +LS T  V    H TP     ++ K P  L  P+ Q       
Sbjct: 4278 GAGPRPQGPPRLPAPPGALS-TGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQL 4336

Query: 192  PPVVLGPPAPDPSPLAPPPG--NPAGFR---ELLSEVLEPGPLPASL----PPAGEQLLP 242
            PP   G P P    L PPPG  +PA  +    L S+ L P   P +L     P    L+P
Sbjct: 4337 PPTHPGTPKPQGPTLEPPPGRVSPAAAQLADTLFSKGLGPWDPPDNLAETQKPEQSSLVP 4396

Query: 243  DLL--ISPHMLP-LTDLEIKFQYRGRP 266
              L  ++  ++P  + L IK + R  P
Sbjct: 4397 GHLDQVNGQVVPEASQLSIKQEPREEP 4423



 Score = 33.1 bits (74), Expect = 0.61
 Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 22/141 (15%)

Query: 127  PTDSQPPEDYSFGAGEE--EEEEEELQRMLPS-----LSLTDAVQSGPHMTPYSLLKEDV 179
            P  S PP    FG   +  E ++EEL    PS     L   D+  SG H+    L   DV
Sbjct: 2271 PLLSPPP----FGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDV 2326

Query: 180  -KWPPTLQPPTLQPP---VVLGPPAPDPS-PLAP-PPGNPAGFR--ELLSEVLEPGPLPA 231
             K P T +   ++P    + L P  P P+  LAP PP +P  FR         +P   P 
Sbjct: 2327 FKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPR 2386

Query: 232  SLPPAGEQLLPDLLISPHMLP 252
              PP  E       + P  LP
Sbjct: 2387 PQPPPPESC---CALPPRSLP 2404



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 47/177 (26%), Positives = 61/177 (34%), Gaps = 35/177 (19%)

Query: 107 PRDMPPQPYKI---YEVCSNGPAPTD---SQPPEDYSFGAGEEEEEEEELQRMLPSLSLT 160
           P   PP+   +   +E     P P +   S PPE        EE          P     
Sbjct: 535 PLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPP 594

Query: 161 DAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVV--LGPPAPDPSPLAPPPG------- 211
           +A +  P   P+   +E    PP  + P   PP    L PP P+ SP++PPP        
Sbjct: 595 EASRLFP---PF---EESPLSPPPEESPLSPPPEASRLSPP-PEDSPMSPPPEESPMSPP 647

Query: 212 ------NPAGFRELLSEVLEPGPL-------PASLPPAGEQLLPDLLISPHMLPLTD 255
                 +P      LS   E  PL       P S PP   +L P    SP   P  D
Sbjct: 648 PEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPED 704



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 155  PSLSLTDAVQSGPHMTPYSLL------KEDVKWPPTLQPPTLQPPVVLGPPA----PDPS 204
            P LS      + P ++P   L      K D      L  P L+ P+   P A    P+P 
Sbjct: 937  PPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPV 996

Query: 205  P---LAPPPGNPAG-FRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLPLT 254
            P   L P PG+P G    +L E L P   P        Q  P    SP  LPL+
Sbjct: 997  PPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLS 1050



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 61/228 (26%), Positives = 77/228 (33%), Gaps = 46/228 (20%)

Query: 107 PRDMPP-QPYKIYEVCSNGPAP---TDSQPPEDYSF----------GAGEEEEEEEELQR 152
           P D P  +P  +Y  C   P     T  QP E              G   E + E  L  
Sbjct: 377 PGDTPTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLNE 436

Query: 153 MLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVV--LGPPAPDPSPLAPPP 210
            +P L         P  +P S        PP  + PT  PP    L PP P+  P +P P
Sbjct: 437 EMPLLP-------PPEESPLS--------PPPEESPTSPPPEASRLSPP-PEELPASPLP 480

Query: 211 GNPAGFRELLSEVLEPGP--LPASLPPAGEQLLP--DLLISP--HMLPLTDLEIKFQYRG 264
                 R L    L P P   P S PP      P  +  +SP     P   LE       
Sbjct: 481 EALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPL---S 537

Query: 265 RPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIP 312
            PP A  +S P       S L    E++    P    ++  P PE+ P
Sbjct: 538 PPPEASPLSPP----FEESPLSPPPEELPTSPPPEASRLS-PPPEESP 580


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 8/77 (10%)

Query: 141 GEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQPPVVLGPPA 200
           GEE+EE    + M+P+    +A    P +TP +        PP L PP+  PP  L PP 
Sbjct: 378 GEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSP-----PPPLPPPSTSPPPPLCPPP 432

Query: 201 P---DPSPLAPPPGNPA 214
           P    P PL  PP  PA
Sbjct: 433 PPPVSPPPLPSPPPPPA 449



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 36/162 (22%)

Query: 125 PAPTDSQ----PPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVK 180
           P PT S     PPED    A +     + +++ +  + +  A  S    TP   + ED  
Sbjct: 495 PTPTPSTATGGPPEDSPTVAPKSTTFLKNIRQFI--MPVVSARSSRVIKTPRRFMDEDPP 552

Query: 181 WPPTLQ-PPTLQPPVVLGPP-----APDPS-PLAP-PPGNPAGFRELLSEVLE------- 225
            PP ++  P L+PP+   PP     AP PS P AP PP  P    E    +L        
Sbjct: 553 KPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWT 612

Query: 226 ------------PGPLPASLP---PAGEQLLPDLLISPHMLP 252
                       P P PA  P   PA     P LL +P   P
Sbjct: 613 SLTRELPPPPPAPPPPPAPSPPPAPATSSRRPLLLRAPQFTP 654



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 107 PRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSG 166
           P   PP P     +C   P P  S PP         +EE+EE    ++P+       +  
Sbjct: 420 PSTSPPPP-----LCPPPPPPV-SPPPLPSPPPPPAQEEQEESPPPVVPATC--SRKRGR 471

Query: 167 PHMTPYSLLKEDVK--WPPTLQPPTLQPPVVLGPPAPDPSPLAP 208
           P +TP    + +     P    PPT  P    G P  D   +AP
Sbjct: 472 PPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAP 515



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 4/124 (3%)

Query: 110 MPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHM 169
           + P P    E     P P D  P E      G        L R  P ++     +  PH 
Sbjct: 666 LTPPPLGAPEAPEPEPPPADDSPAEPEPRAVGRTNHLS--LPRFAPVVTTPVKAEVSPHG 723

Query: 170 TPYSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFREL-LSEVLEPGP 228
            P +L          LQP       +L    P P P   PP +P     L  + +   G 
Sbjct: 724 AP-ALSNGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQMPPLEKARIAGVGS 782

Query: 229 LPAS 232
           LP S
Sbjct: 783 LPLS 786


>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
          Length = 980

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 11/63 (17%)

Query: 177 EDVKWPPTLQPPTLQPPVVLGPP----APDPSPLAPPPGNPAGFRELLSEVLEPGPLPAS 232
           EDV  P  L  P  QPPVV GPP     P P  L PPP N      L   V  PGPLP S
Sbjct: 321 EDVNLPGMLPFPA-QPPVVEGPPPPGLPPPPPILTPPPVN------LRPPVPPPGPLPPS 373

Query: 233 LPP 235
           LPP
Sbjct: 374 LPP 376



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 167 PHMTPYSLLKEDVKWPPT--LQPPT---LQPPVVLGPPAPDPSPLAPPPGNPAGFRELLS 221
           P M P+      V+ PP   L PP      PPV L PP P P PL P           L 
Sbjct: 326 PGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPS----------LP 375

Query: 222 EVLEPGPLPASLPPAGEQLLPD 243
            V  P P    L P+G    P+
Sbjct: 376 PVTGPPPPLPPLQPSGMDAPPN 397



 Score = 30.0 bits (66), Expect = 5.1
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 182 PPTLQPP--TLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPAS 232
           PP L PP   L+PPV   PP P P  L P  G P     L    ++  P  A+
Sbjct: 350 PPILTPPPVNLRPPVP--PPGPLPPSLPPVTGPPPPLPPLQPSGMDAPPNSAT 400


>gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
           sapiens]
          Length = 362

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 43/175 (24%)

Query: 23  AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
           AQ+ S  Y GL W +  K LF IPW+H  + G         ++AW    GK+ EG ++  
Sbjct: 15  AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65

Query: 83  PAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGE 142
           P   +           D  L    P    P       +C+ G            S G  E
Sbjct: 66  PPPGR----------NDSTL----PSTRAPPSGLQEPLCTGG-----------NSLGIPE 100

Query: 143 EEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTL-QPPTLQPPVVL 196
           E +          S +LT +  +    + ++   ED +WP  L Q  +L PP++L
Sbjct: 101 ESQAS--------SPTLTASSPNAQDGSGFATEDEDKEWPHRLAQQGSLLPPILL 147


>gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]
          Length = 362

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 43/175 (24%)

Query: 23  AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
           AQ+ S  Y GL W +  K LF IPW+H  + G         ++AW    GK+ EG ++  
Sbjct: 15  AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65

Query: 83  PAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGE 142
           P   +           D  L    P    P       +C+ G            S G  E
Sbjct: 66  PPPGR----------NDSTL----PSARAPPSGLQEPLCTGG-----------NSLGIPE 100

Query: 143 EEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTL-QPPTLQPPVVL 196
           E +          S +LT +  +    + ++   ED +WP  L Q  +L PP++L
Sbjct: 101 ESQAS--------SPTLTASSPNAQDGSGFATEDEDKEWPHRLAQQGSLLPPILL 147


>gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]
          Length = 362

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 43/175 (24%)

Query: 23  AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
           AQ+ S  Y GL W +  K LF IPW+H  + G         ++AW    GK+ EG ++  
Sbjct: 15  AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65

Query: 83  PAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGE 142
           P   +           D  L    P    P       +C+ G            S G  E
Sbjct: 66  PPPGR----------NDSTL----PSARAPPSGLQEPLCTGG-----------NSLGIPE 100

Query: 143 EEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTL-QPPTLQPPVVL 196
           E +          S +LT +  +    + ++   ED +WP  L Q  +L PP++L
Sbjct: 101 ESQAS--------SPTLTASSPNAQDGSGFATEDEDKEWPHRLAQQGSLLPPILL 147


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 18/126 (14%)

Query: 127 PTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSL-------TDAVQSGPHMTPYSLLKEDV 179
           P + +  E++S    E++ ++ E ++              T    S     P S+    +
Sbjct: 343 PEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQI 402

Query: 180 KWPPTLQPPTLQPPVV--LGPPAPDPS-PLAPPPGNPA--------GFRELLSEVLEPGP 228
           + PP   PP L PP    L PP P    P  PPPG P         G R  L  +L PGP
Sbjct: 403 QAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGP 462

Query: 229 LPASLP 234
            P   P
Sbjct: 463 PPGRPP 468



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/64 (40%), Positives = 28/64 (43%), Gaps = 18/64 (28%)

Query: 182 PPTLQPPTLQPPVVLG---------PPAPDPS-PLAPPPGNPAGFRELLSEVLEPGPLPA 231
           PP   PP L+PP + G         PP P P  P  PPPG P G        L PGP P 
Sbjct: 434 PPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPG--------LPPGPPPR 485

Query: 232 SLPP 235
             PP
Sbjct: 486 GPPP 489



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 182 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEP------GPLPASLPP 235
           PP   PP L P    GPP   P P  PPP  P G       ++ P      GP P  L P
Sbjct: 470 PPPGPPPGLPP----GPPPRGPPPRLPPPA-PPGIPPPRPGMMRPPLVPPLGPAPPGLFP 524

Query: 236 AGEQLLPDLLISP 248
                 P +L +P
Sbjct: 525 PAPLPNPGVLSAP 537



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 182 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLP----ASLPP 235
           PP   PP L PP   G P P P  + PP   P G       +  P PLP     S PP
Sbjct: 483 PPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLG--PAPPGLFPPAPLPNPGVLSAPP 538



 Score = 32.3 bits (72), Expect = 1.0
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 183 PTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGEQLLP 242
           P L PP   P    GPP P P P  PP   P G    L     P P P  +PP    ++ 
Sbjct: 455 PRLLPPGPPPGRPPGPP-PGPPPGLPPGPPPRGPPPRL-----PPPAPPGIPPPRPGMMR 508

Query: 243 DLLISP 248
             L+ P
Sbjct: 509 PPLVPP 514


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 167 PHMTPYSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEP 226
           P  TP       +  PP   PP L  P + G P+P  SPLA PP  P     L    L+ 
Sbjct: 575 PLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP--PQAPPXLALPPLQA 632

Query: 227 GPLPASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNP 275
            P P + PP      P    +P+ L +  L+  F     PP     S P
Sbjct: 633 PPSPPASPPLSPLATPSPQ-APNALAVHLLQAPFSPPPSPPVQAPFSPP 680



 Score = 38.1 bits (87), Expect = 0.019
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 182 PPTLQPPTLQPPVVLGPPAPDPSP-----LAPPPGNPAGFRELLSEVLEPGPLPASLPPA 236
           PP+  PP+L  P +  PP+P  SP       PPP  P     L +  L+  P P + PP 
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP---PLAAPPLQVPPSPPASPPM 747

Query: 237 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTIS 273
                P   + P +L    L++       PP +L +S
Sbjct: 748 SPSATPPPRVPP-LLAAPPLQVP----PSPPASLPMS 779



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 45/180 (25%), Positives = 61/180 (33%), Gaps = 38/180 (21%)

Query: 107 PRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSG 166
           P  +PP P     +  +   P  + PP                     P L +  +  + 
Sbjct: 703 PLQVPPSPPASPPMSPSATPPPQAPPP------------------LAAPPLQVPPSPPAS 744

Query: 167 PHMTPYSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDP----SPLA-PPPGNPAGFRELLS 221
           P M+P +        PP   PP L  P +  PP+P      SPLA PPP  P        
Sbjct: 745 PPMSPSAT-------PPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPL 797

Query: 222 EVLEPGPLPASLP------PAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNP 275
           + L P P PAS P      P+    +  L   P   P        Q    PP + T+  P
Sbjct: 798 QAL-PSP-PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 855



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 16/104 (15%)

Query: 155 PSLSLTDAVQSGPHMTPYS----LLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPP 210
           P  +L     S P   P+S    L    +  PP   PP L  P++  PP+P  SP    P
Sbjct: 796 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 855

Query: 211 GNP---------AGFRELLSEVLEPG-PLPASLPPAGEQLLPDL 244
             P         +G R  L+  L PG P P S  P+     PDL
Sbjct: 856 RRPPTPGPDTSVSGPR--LTLALAPGPPPPPSRSPSSTLSGPDL 897



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 155 PSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQ-PPVVLG-PPAPDPSPLAPPPGN 212
           P  +L+      P     SL+   ++   +L PP+LQ PP  L  PP  +   LAPPP  
Sbjct: 488 PLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQ 547

Query: 213 PAGFRELLSEVLEPGPLPASLP 234
            A    L +  LE  P PA  P
Sbjct: 548 TAS-APLTTPHLETPPCPAPCP 568



 Score = 33.1 bits (74), Expect = 0.61
 Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 9/91 (9%)

Query: 171 PYSLLKEDVKWPPTLQPPTLQP-------PVVLGPPAPDPSPL-APPPGNPAGFRELLSE 222
           P SL    ++  P+L PP LQ        P +  PP P P PL APP        E  S 
Sbjct: 527 PASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSS 586

Query: 223 VLEPGP-LPASLPPAGEQLLPDLLISPHMLP 252
           +  P P  P +L     Q LP   +SP   P
Sbjct: 587 IATPPPQAPPALASPPLQGLPSPPLSPLATP 617



 Score = 32.7 bits (73), Expect = 0.79
 Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 22/77 (28%)

Query: 182 PPTLQPPTLQPPVVLGP----PAPDPSPL------APPPGNPAGFRELLSEVLEPGPLPA 231
           PP + PP       LGP    P   PSP        PPP N A             PLPA
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAA------------TPLPA 329

Query: 232 SLPPAGEQLLPDLLISP 248
           +LPP+     P  L  P
Sbjct: 330 TLPPSPPLATPLPLAPP 346



 Score = 31.2 bits (69), Expect = 2.3
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 14/93 (15%)

Query: 187 PPTLQPPVVLGPPAPDPSPLAPP-PGNPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLL 245
           P TL P     PP   P PLAPP P  P   + L S    P   P+  PP+     P + 
Sbjct: 328 PATLPP----SPPLATPLPLAPPSPSAPPSLQTLPSPPATP---PSQAPPS--MTTPPMQ 378

Query: 246 ISPHMLPLTDLEIKFQYRG----RPPRALTISN 274
             P +  +  +++           PP  L +S+
Sbjct: 379 APPSLQTIPPIQVPHSLTSPSLQAPPSPLALSS 411



 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 155 PSLSLTDAVQS--GPHMTPYSLLKEDVKWPPTLQPPTLQ--PPVVLGPPAPDPSPLAPP 209
           PS S   ++Q+   P  TP S     +  PP   PP+LQ  PP+ +      PS  APP
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPP 404



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 13/79 (16%)

Query: 165 SGPHMTPYSLLKEDVKWPPTLQ--------PPTLQPPVVLGPP--APDPSPLAPPPGNPA 214
           S P  TP  L       PP+LQ        PP+  PP +  PP  AP      PP   P 
Sbjct: 334 SPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP- 392

Query: 215 GFRELLSEVLEPGPLPASL 233
               L S  L+  P P +L
Sbjct: 393 --HSLTSPSLQAPPSPLAL 409



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 33/114 (28%), Positives = 40/114 (35%), Gaps = 10/114 (8%)

Query: 167 PHMTPYSLLKEDVKWPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEP 226
           P   P SL    +  PP   PP L  P +   P+P  S     P +P       S  L  
Sbjct: 769 PPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSP-------SASLPM 821

Query: 227 GPLPASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRL 280
            PL    P A   L   LL  P   P +      Q   RPP     ++  G RL
Sbjct: 822 SPLATPPPQAPPVLAAPLLQVPPSPPASP---TLQAPRRPPTPGPDTSVSGPRL 872


>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 490

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 28/175 (16%)

Query: 110 MPPQPYKIYEVCSNGPAP-TDSQPPEDYSFGAGEEEEEEEELQRMLPSL-----SLTDAV 163
           +P  P  +  + S  P+P +D  PP D              L   +PSL     SL   V
Sbjct: 244 VPSPPSDVPSLLSGVPSPPSDISPPSDVP-----------SLLSDVPSLPSDVPSLLSGV 292

Query: 164 QSGPHMTPYSLLKEDVKWPPTLQP-PTLQPPVVLGPPAPDPSPLAPPPG---NPAGFREL 219
            S P   P SLL  DV  PP+  P P    P++ G P+P PS +  PP    +P     L
Sbjct: 293 PSPPSDVP-SLLS-DVPSPPSDVPSPPSDIPLLSGVPSP-PSDVPSPPSDVPSPPSDVPL 349

Query: 220 LSEVLEP---GPLPASLPPAGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALT 271
           LS V  P    PL + +P      +P LL+SPH L ++   +   +R   P  L+
Sbjct: 350 LSGVPSPLSDVPLLSGVPSPPSD-VPSLLMSPHRLLMSHYSLVSPHRLDVPSLLS 403



 Score = 36.6 bits (83), Expect = 0.055
 Identities = 38/111 (34%), Positives = 47/111 (42%), Gaps = 16/111 (14%)

Query: 159 LTDAVQSGPHMTPYSL-----LKEDVKWPPTLQPPTLQ--PPVVLG---PPAPDPSPLAP 208
           L   V S P   P  L     L  DV  PP+  P  L   P ++ G   PP+  PSP + 
Sbjct: 110 LLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSD 169

Query: 209 PPGNPAGFRELLSEVLEPG---PLPAS---LPPAGEQLLPDLLISPHMLPL 253
            P  P+    LLS V  P    P P S    PP+   LL D+   P  +PL
Sbjct: 170 VPSPPSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPL 220



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 28/161 (17%)

Query: 107 PRDMPPQPYKIYEVCSNGPAPTDS--QPPEDYSFGAGEEEEEEEELQRMLPS----LSLT 160
           P D+P  P  +  + S  P+P      PP D           +  L   +PS    + L 
Sbjct: 167 PSDVPSPPSDVPSLLSGVPSPPSDVPSPPSDVP-----SPPSDVPLLSDVPSPPSDVPLL 221

Query: 161 DAVQSGPHMTPYSLLKE-----DVKWPPTLQPPTLQ----PPVVLGPPAPDPSPLAPPPG 211
             V S P   P SL  +      V  PP+  P  L     PP  + PP+  PS L+  P 
Sbjct: 222 SDVPSPPSDVP-SLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSDISPPSDVPSLLSDVPS 280

Query: 212 NPAGFRELLSEVLEPGPLPASLPPAGEQLLPDLLISPHMLP 252
            P+    LLS V  P   P+ +P     LL D+   P  +P
Sbjct: 281 LPSDVPSLLSGVPSP---PSDVP----SLLSDVPSPPSDVP 314


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 45/175 (25%), Positives = 64/175 (36%), Gaps = 41/175 (23%)

Query: 111 PPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRM----------------- 153
           PPQP+ +    S G AP  + P   Y   + +    +  LQ                   
Sbjct: 314 PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 373

Query: 154 --------LPSLSLTDAVQSGPHM---TPYSLLKEDVKWPPTLQP----PTLQPPVVLGP 198
                   +P L    A +  PH+   +P+S +  ++  PP L+P     T  PP    P
Sbjct: 374 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFS-MNANLPPPPALKPLSSLSTHHPPSAHPP 432

Query: 199 P---APDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAG-EQLLPDLLISPH 249
           P    P   PL   P  P G    L++     P PAS PP G  Q+ P    + H
Sbjct: 433 PLQLMPQSQPLPSSPAQPPG----LTQSQNLPPPPASHPPTGLHQVAPQPPFAQH 483



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)

Query: 191 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA--SLPPAG 237
           QPP +  P    P+P + PPG P        ++  PGP P+  ++PP G
Sbjct: 183 QPPALQAPTGVTPAPSSAPPGTP--------QLPTPGPTPSATAVPPQG 223



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 182 PPTLQPPT-------LQPPVVLGPPAPDPSPLA---PPPGNPAGFRELLSEVLEPGPLPA 231
           PP LQ PT         PP     P P P+P A   PP G+P   +          P+P 
Sbjct: 184 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPH 243

Query: 232 SLPPAGEQLLPDLLISPHMLP 252
           +       L P    SPH  P
Sbjct: 244 THIQQAPALHPQRPPSPHPPP 264


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 45/175 (25%), Positives = 64/175 (36%), Gaps = 41/175 (23%)

Query: 111  PPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRM----------------- 153
            PPQP+ +    S G AP  + P   Y   + +    +  LQ                   
Sbjct: 868  PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927

Query: 154  --------LPSLSLTDAVQSGPHM---TPYSLLKEDVKWPPTLQP----PTLQPPVVLGP 198
                    +P L    A +  PH+   +P+S +  ++  PP L+P     T  PP    P
Sbjct: 928  IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFS-MNANLPPPPALKPLSSLSTHHPPSAHPP 986

Query: 199  P---APDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAG-EQLLPDLLISPH 249
            P    P   PL   P  P G    L++     P PAS PP G  Q+ P    + H
Sbjct: 987  PLQLMPQSQPLPSSPAQPPG----LTQSQNLPPPPASHPPTGLHQVAPQPPFAQH 1037



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)

Query: 191 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA--SLPPAG 237
           QPP +  P    P+P + PPG P        ++  PGP P+  ++PP G
Sbjct: 737 QPPALQAPTGVTPAPSSAPPGTP--------QLPTPGPTPSATAVPPQG 777



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 182 PPTLQPPT-------LQPPVVLGPPAPDPSPLA---PPPGNPAGFRELLSEVLEPGPLPA 231
           PP LQ PT         PP     P P P+P A   PP G+P   +          P+P 
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPH 797

Query: 232 SLPPAGEQLLPDLLISPHMLP 252
           +       L P    SPH  P
Sbjct: 798 THIQQAPALHPQRPPSPHPPP 818


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 45/175 (25%), Positives = 64/175 (36%), Gaps = 41/175 (23%)

Query: 111  PPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGEEEEEEEELQRM----------------- 153
            PPQP+ +    S G AP  + P   Y   + +    +  LQ                   
Sbjct: 868  PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927

Query: 154  --------LPSLSLTDAVQSGPHM---TPYSLLKEDVKWPPTLQP----PTLQPPVVLGP 198
                    +P L    A +  PH+   +P+S +  ++  PP L+P     T  PP    P
Sbjct: 928  IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFS-MNANLPPPPALKPLSSLSTHHPPSAHPP 986

Query: 199  P---APDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAG-EQLLPDLLISPH 249
            P    P   PL   P  P G    L++     P PAS PP G  Q+ P    + H
Sbjct: 987  PLQLMPQSQPLPSSPAQPPG----LTQSQNLPPPPASHPPTGLHQVAPQPPFAQH 1037



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)

Query: 191 QPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPA--SLPPAG 237
           QPP +  P    P+P + PPG P        ++  PGP P+  ++PP G
Sbjct: 737 QPPALQAPTGVTPAPSSAPPGTP--------QLPTPGPTPSATAVPPQG 777



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 182 PPTLQPPT-------LQPPVVLGPPAPDPSPLA---PPPGNPAGFRELLSEVLEPGPLPA 231
           PP LQ PT         PP     P P P+P A   PP G+P   +          P+P 
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPH 797

Query: 232 SLPPAGEQLLPDLLISPHMLP 252
           +       L P    SPH  P
Sbjct: 798 THIQQAPALHPQRPPSPHPPP 818


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,294,223
Number of Sequences: 37866
Number of extensions: 1686064
Number of successful extensions: 16091
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 568
Number of HSP's that attempted gapping in prelim test: 10553
Number of HSP's gapped (non-prelim): 3723
length of query: 504
length of database: 18,247,518
effective HSP length: 107
effective length of query: 397
effective length of database: 14,195,856
effective search space: 5635754832
effective search space used: 5635754832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.