Guide to the Human Genome
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Name: SLC25A46 Sequence: fasta or formatted (418aa) NCBI GI: 20270311
Description:

solute carrier family 25, member 46

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         19           2
 C cysteine            1.2          5           1
 D aspartate           2.6         11           1
 E glutamate           5.3         22           2
 F phenylalanine       4.8         20           1
 G glycine            10.0         42           4
 H histidine           3.8         16           1
 I isoleucine          8.1         34           2
 K lysine              3.1         13           1
 L leucine            10.3         43           3
 M methionine          1.7          7           1
 N asparagine          3.3         14           2
 P proline             6.2         26           2
 Q glutamine           4.5         19           1
 R arginine            4.5         19           2
 S serine              7.4         31           2
 T threonine           6.9         29           2
 V valine              6.5         27           2
 W tryptophan          1.0          4           1
 Y tyrosine            4.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 46 
SLC25A19              0.024   solute carrier family 25, member 19 
SLC25A19              0.024   solute carrier family 25, member 19 
SLC25A19              0.024   solute carrier family 25, member 19 
SLC25A36              0.021   solute carrier family 25, member 36 isoform a [Homo...
SLC25A21              0.019   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A31              0.019   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A33              0.016   mitochondrial carrier protein MGC4399 
SLC25A29              0.015   solute carrier family 25, member 29 
SLC25A24              0.015   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.015   solute carrier family 25 member 24 isoform 2 
LOC100292202          0.015   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.015   PREDICTED: similar to solute carrier family 25, mem...
SLC25A6               0.015   solute carrier family 25, member A6 
SLC25A5               0.015   solute carrier family 25, member 5 
SLC25A25              0.015   solute carrier family 25, member 25 isoform c 
SLC25A25              0.015   solute carrier family 25, member 25 isoform a 
SLC25A25              0.015   solute carrier family 25, member 25 isoform d 
SLC25A25              0.015   solute carrier family 25, member 25 isoform b 
SLC25A36              0.013   solute carrier family 25, member 36 isoform b [Homo...
SLC25A44              0.013   solute carrier family 25, member 44 isoform 1 
SLC25A23              0.013   solute carrier family 25, member 23 
SLC25A4               0.012   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A34              0.011   solute carrier family 25, member 34 
SLC25A17              0.011   solute carrier family 25 (mitochondrial carrier; pero...
SLC25A32              0.010   solute carrier family 25, member 32 
CNOT3                 0.010   CCR4-NOT transcription complex, subunit 3 
SLC25A2               0.010   solute carrier family 25 member 2 
SLC25A44              0.010   solute carrier family 25, member 44 isoform 2 [Homo...
C16orf59              0.010   hypothetical protein LOC80178 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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