Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4503247
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503247 ribosomal RNA processing 1 homolog [Homo sapiens]
(461 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503247 ribosomal RNA processing 1 homolog [Homo sapiens] 912 0.0
gi|57863269 ribosomal RNA processing 1 homolog B [Homo sapiens] 391 e-109
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 46 6e-05
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 43 5e-04
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 43 5e-04
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 43 7e-04
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 42 9e-04
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 42 9e-04
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 42 9e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 42 0.001
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 41 0.003
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 41 0.003
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 41 0.003
gi|122937227 U2-associated SR140 protein [Homo sapiens] 40 0.003
gi|148746195 trichohyalin [Homo sapiens] 40 0.006
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s... 40 0.006
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 39 0.008
gi|52426743 cisplatin resistance-associated overexpressed protei... 39 0.008
gi|19923485 cisplatin resistance-associated overexpressed protei... 39 0.008
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 39 0.010
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 39 0.013
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 39 0.013
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 39 0.013
gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 39 0.013
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 39 0.013
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 38 0.017
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 37 0.029
gi|4826894 phosphodiesterase 1C [Homo sapiens] 37 0.029
>gi|4503247 ribosomal RNA processing 1 homolog [Homo sapiens]
Length = 461
Score = 912 bits (2356), Expect = 0.0
Identities = 461/461 (100%), Positives = 461/461 (100%)
Query: 1 MVSRVQLPPEIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLF 60
MVSRVQLPPEIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLF
Sbjct: 1 MVSRVQLPPEIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLF 60
Query: 61 YCMWMQDKPLLQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYM 120
YCMWMQDKPLLQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYM
Sbjct: 61 YCMWMQDKPLLQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYM 120
Query: 121 LMRMVLNESLKVLKMQGWEERQIEELLELLMTEILHPSSQAPNGVKSHFIEIFLEELTKV 180
LMRMVLNESLKVLKMQGWEERQIEELLELLMTEILHPSSQAPNGVKSHFIEIFLEELTKV
Sbjct: 121 LMRMVLNESLKVLKMQGWEERQIEELLELLMTEILHPSSQAPNGVKSHFIEIFLEELTKV 180
Query: 181 GAEELTADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQD 240
GAEELTADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQD
Sbjct: 181 GAEELTADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQD 240
Query: 241 EEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDY 300
EEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDY
Sbjct: 241 EEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDY 300
Query: 301 EAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKK 360
EAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKK
Sbjct: 301 EAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKK 360
Query: 361 TKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRD 420
TKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRD
Sbjct: 361 TKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRD 420
Query: 421 QPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
QPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE
Sbjct: 421 QPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
>gi|57863269 ribosomal RNA processing 1 homolog B [Homo sapiens]
Length = 758
Score = 391 bits (1004), Expect = e-109
Identities = 215/471 (45%), Positives = 298/471 (63%), Gaps = 22/471 (4%)
Query: 8 PPEIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQD 67
P EIQ AQRLA +E+ RDRAV+KLR+YI +TQR GGF+ +ELLK+WKGLFYCMW+QD
Sbjct: 7 PAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFYCMWVQD 66
Query: 68 KPLLQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 127
+PLLQEEL TI+QLVHA + AQHLF+Q FWQTMNREW GIDRLRLDK+YML+R+VL
Sbjct: 67 EPLLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLR 126
Query: 128 ESLKVLKMQGWEERQIEELLELLMTEILHPSSQAPNGVKSHFIEIFLEELTKVGAEELTA 187
+S +VLK GWEE +I+ L++LM E+L P SQ+PNGV+ HFI+I+L+EL+KVG +EL A
Sbjct: 127 QSFEVLKRNGWEESRIKVFLDVLMKEVLCPESQSPNGVRFHFIDIYLDELSKVGGKELLA 186
Query: 188 DQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQ--DEEVAS 245
DQNLKFIDPFC+IAA+TKD ++ I RG+FE IV+Q+P E+ + E T+ D ++++
Sbjct: 187 DQNLKFIDPFCKIAAKTKDHTLVQTIARGVFEAIVDQSPFVPEETMEEQKTKVGDGDLSA 246
Query: 246 DSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAVAN 305
+ +E R +K + E G + G D+ GP+LQFDY+AVA+
Sbjct: 247 EEIPENEVSLRRAVSKKKTALGKNHSRKDGLSDERGRDDCGTFEDT-GPLLQFDYKAVAD 305
Query: 306 RLFEMASRQSTPSQNRKRLYKVIRKLQDLAGG------IFPEDEIPEKACRRLLEGRRQK 359
RL EM SR++TP NRKRL K+I+K QDL+ G F ED ++ + L +G+ +K
Sbjct: 306 RLLEMTSRKNTPHFNRKRLSKLIKKFQDLSEGSSISQLSFAEDISADEDDQILSQGKHKK 365
Query: 360 KTKKQKRLLRLQQERGK-----GEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAE 414
K K L++E+G E++ S +R+R +++ PE G P +
Sbjct: 366 KGNKLLEKTNLEKEKGSRVFCVEEEDSESSLQKRRRKKKKKHHLQPENPGPGGAAPSLEQ 425
Query: 415 RALLRDQPRGRGQRGARQRRRTP-RPLTSARAKAANVQEP-----EKKKKR 459
+P G + + R P TS+ + + + P K+KR
Sbjct: 426 NR--GREPEASGLKALKARVAEPGAEATSSTGEESGSEHPPAVPMHNKRKR 474
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 46.2 bits (108), Expect = 6e-05
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 354 EGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTA 413
EG+ +++ +++KR R ++ER K E+E ERK+ R+ VG E R E E+
Sbjct: 129 EGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEK-ERKERK 187
Query: 414 ERALLRDQPRGRGQRGARQRRRTPRPLTSARAK------AANVQEPEKKKKRRE 461
+R R + + +R R+ R+ R R K N +E E+ K+ R+
Sbjct: 188 KRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERK 241
Score = 43.1 bits (100), Expect = 5e-04
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADP 400
E E K RR E R++++ K++KR ERGK EK+ ER+R +RR
Sbjct: 54 ERESERKKERREREKRKREREKERKR------ERGKKEKKGERKKEERERKKRR-----R 102
Query: 401 EARAEAGEQPGTAERALLRDQPRGR-GQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
E + GE+ +R + RGR + G + R+ R + + +E EK+++R
Sbjct: 103 EKENKEGEE--KEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERER 160
Query: 460 RE 461
+E
Sbjct: 161 KE 162
Score = 43.1 bits (100), Expect = 5e-04
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 346 EKACRRLLEGRRQKKTK----KQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPE 401
+K R + RR+K+ K K+KR + ++ERG+ KE ERK R+R + E
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKE--GKERERKEERKREERKERE 148
Query: 402 ARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
+ E E+ ER + R R Q G ++ R + + + N +E +K+++R+E
Sbjct: 149 RKKEEREK----ERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKE 204
Score = 39.3 bits (90), Expect = 0.008
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 356 RRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRR-------GVGADPEARAEAGE 408
RR+++ +K++R ++ERGK EK+ ER+R +RR G + + E E
Sbjct: 63 RREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKE 122
Query: 409 QPGTAERALLRD--QPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
+ T++ R+ + R R +R R+R++ R R E+KK+ R+
Sbjct: 123 RGRTSKEGKERERKEERKREERKERERKKEEREKERERK--------ERKKRERK 169
Score = 37.4 bits (85), Expect = 0.029
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 354 EGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTA 413
E R+ +T+K+ + R + ER K +E ER++ R+R G + E+
Sbjct: 40 EREREIETRKEGKKER-ESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERK 98
Query: 414 ERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
+R ++ G + +++ + R TS K +E K+++R+E
Sbjct: 99 KRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKE 146
Score = 35.0 bits (79), Expect = 0.14
Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 255 ERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAVANRLFEMASRQ 314
ER ++R +K G + E E + + + G E + E R
Sbjct: 72 EREKERKRERGKKEKKGERKKEERERKKRRREKENKEGE-------EKEKRKKKEKKERG 124
Query: 315 STPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKT--KKQKRLLRLQQ 372
T + ++R K RK ++ ++E ++ R+ + R +K+ K+++R + ++
Sbjct: 125 RTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERK 184
Query: 373 ERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQ 432
ER K E+ ER+R RR + + + E ++ + R++ RG+ +R R+
Sbjct: 185 ERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERK 244
Query: 433 R 433
+
Sbjct: 245 K 245
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 43.1 bits (100), Expect = 5e-04
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 19/232 (8%)
Query: 239 QDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQF 298
++EE + +E EG E + + E G + DD +
Sbjct: 379 EEEEEEEEEEEEEEGPEAREMAMMQEGEHTVTSHSSIIHRLPGSDNLYDD--------PY 430
Query: 299 DYEAVANRLFEMASRQ--STPSQNRKRLYKVIR------KLQDLAGGIFPEDEIPEKACR 350
E + L A+ ST S R+R Y R + L E E + A R
Sbjct: 431 QPEITPSPLQPPAAPAPTSTTSSARRRAYCRNRDHFATIRTASLVSRQIQEHE-QDSALR 489
Query: 351 RLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERK-RSRRRGVGADPEARAEAGEQ 409
L G ++ + + QK+LL L+ R +GE+E S ++R+ ++R G GA+ E A +
Sbjct: 490 EQLSGYKRMRRQHQKQLLALES-RLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQA 548
Query: 410 PGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
G E + + R Q Q+++ L A+ + +++ + K++ +E
Sbjct: 549 IGEKEARAAQAEERKFQQHILGQQKKELAALLEAQKRTYKLRKEQLKEELQE 600
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 43.1 bits (100), Expect = 5e-04
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 19/232 (8%)
Query: 239 QDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQF 298
++EE + +E EG E + + E G + DD +
Sbjct: 379 EEEEEEEEEEEEEEGPEAREMAMMQEGEHTVTSHSSIIHRLPGSDNLYDD--------PY 430
Query: 299 DYEAVANRLFEMASRQ--STPSQNRKRLYKVIR------KLQDLAGGIFPEDEIPEKACR 350
E + L A+ ST S R+R Y R + L E E + A R
Sbjct: 431 QPEITPSPLQPPAAPAPTSTTSSARRRAYCRNRDHFATIRTASLVSRQIQEHE-QDSALR 489
Query: 351 RLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERK-RSRRRGVGADPEARAEAGEQ 409
L G ++ + + QK+LL L+ R +GE+E S ++R+ ++R G GA+ E A +
Sbjct: 490 EQLSGYKRMRRQHQKQLLALES-RLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQA 548
Query: 410 PGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
G E + + R Q Q+++ L A+ + +++ + K++ +E
Sbjct: 549 IGEKEARAAQAEERKFQQHILGQQKKELAALLEAQKRTYKLRKEQLKEELQE 600
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 42.7 bits (99), Expect = 7e-04
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADP 400
E E K RR + R +K+ + ++R ++ER + E++R+R++ +
Sbjct: 72 ERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERET 131
Query: 401 EARAEAG---EQPGTAERALLRDQPRGRGQRGARQR-RRTPRPLTSARAKAANVQEPEKK 456
E E G + G ER RD + R ++ R+R R+T R R + N QE ++
Sbjct: 132 EREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRER 191
Query: 457 KKRRE 461
+++RE
Sbjct: 192 ERQRE 196
Score = 37.0 bits (84), Expect = 0.038
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Query: 326 KVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPG 385
K++ D G ++ E IP L RR+ +++ R RG G+ + G
Sbjct: 4 KIVPATADQLGTLWVEVTIP------LDFSRRRPGSQESPR------RRGLGQAHKDADG 51
Query: 386 MERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQR-------RRTPR 438
+R+R+R++ E R E ER +D+ R R + RQR R+T R
Sbjct: 52 DDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDR 111
Query: 439 PLTSARAKAANVQEPEKKKKRRE 461
R K N Q+ +++ RE
Sbjct: 112 ERDRQREKERNRQKERERETERE 134
Score = 36.2 bits (82), Expect = 0.064
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 346 EKACRRLLEGRRQKKT-------KKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGA 398
+K R + +RQ++T +K++R ++ER + K ER+R R+R
Sbjct: 276 QKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETER 335
Query: 399 DPEARAEAGEQPGTAERALLRDQPRGRGQRGARQ-RRRTPRPLTSARAKAANVQEPEKKK 457
D E E + T + R++ R G+ G RQ R R R A +E E+ +
Sbjct: 336 DREKERERKRKRQT---EMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDR 392
Query: 458 KR 459
R
Sbjct: 393 DR 394
Score = 34.3 bits (77), Expect = 0.24
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQER----GKGEKEPPSPGMERKRSRRRGV 396
E E + R R +++ +K+KR + +ER G+ + ER+R R R
Sbjct: 322 ERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQS 381
Query: 397 GADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKK 456
+ E R ++ ER ++ R GQR ++R + S R + + ++K
Sbjct: 382 AREREERERDRDRDRQKERERQTEKDRD-GQRETEKQREREKDRESERGRERGREREKQK 440
Query: 457 KKRRE 461
+ R+
Sbjct: 441 GRERD 445
Score = 33.5 bits (75), Expect = 0.42
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADP 400
ED E+ R E + +T+++++ R + + K E+E ER+R+ R D
Sbjct: 202 EDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQA-ERERASERETERDK 260
Query: 401 EARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRR 460
E E RD+ R R +R + R+T R + + +E E+K++R+
Sbjct: 261 ERERE-------------RDRDRDRDRRQKERERQTDR---KRQRRTERDRETERKRERQ 304
Score = 33.5 bits (75), Expect = 0.42
Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 30/228 (13%)
Query: 235 ELDTQDE-EVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGG 293
E +T+ E E +D + + + +K++E+ A R E + DRD
Sbjct: 215 ERETETETERKRQTDRERDRQRKTEREREKQAERERASE--RETERDKERERERDRDRDR 272
Query: 294 PVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLL 353
Q + E +R RQ ++R+ K R+ + + E+ +R
Sbjct: 273 DRRQKERERQTDR-----KRQRRTERDRETERKRERQRE--------RERERERNRKRER 319
Query: 354 EGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTA 413
E R+++ ++Q+ R +E+ + K M+R+R+R+ G E R +A +
Sbjct: 320 ERERERERERQRETER-DREKERERKRKRQTEMDRERNRQTG----REGRRQAERE---- 370
Query: 414 ERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
R++ R R ++ AR+R R R K Q + + +RE
Sbjct: 371 -----RERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRE 413
Score = 32.7 bits (73), Expect = 0.71
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 350 RRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQ 409
+R E RQK+ +++K +QER + E++ R RG + E E
Sbjct: 168 QRQTERNRQKEREREKN----RQERRERERQREKENKTEDRHSERGRERERERETET--- 220
Query: 410 PGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
ER D+ R R ++ R+R + A + A+ +E E+ K+R
Sbjct: 221 --ETERKRQTDRERDRQRKTEREREK------QAERERASERETERDKER 262
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 42.4 bits (98), Expect = 9e-04
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 299 DYEAVANRL---FEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEG 355
D +AVA + F+ S S +++L + +KLQ+L + +K + E
Sbjct: 245 DGKAVACNIKVSFDSTKHLSDASIKKRQLER--QKLQELE-----QQREEQKRREKEAEE 297
Query: 356 RRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAER 415
R++ + +KQK L L++ER + EK +R R RR + +AE EQ E+
Sbjct: 298 RQRAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAE--EQKQLQEK 355
Query: 416 ALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
L ++ QR + R L +RAKA ++E E+K+++
Sbjct: 356 IKLEERKLLLAQRNLQSIRLIAELL--SRAKAVKLREQEQKEEK 397
Score = 29.6 bits (65), Expect = 6.0
Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 11/134 (8%)
Query: 338 IFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVG 397
+ PED PEK C + ++ K + +Q + + R+ S+ RG
Sbjct: 531 VVPEDGSPEKRCPGGVLSCIPDNNQQPKGIPACEQNVSRKDTRSEQDKCNREPSKGRGRA 590
Query: 398 ADPEARAEAGEQPGTAERALLRDQPRGRGQR-----------GARQRRRTPRPLTSARAK 446
+ A RA R+ R R +R R+R +P S R+
Sbjct: 591 TGDGLADRHKRERSRARRASSREDGRPRKERRPHKKHAYKDDSPRRRSTSPDHTRSRRSH 650
Query: 447 AANVQEPEKKKKRR 460
+ + E+ ++RR
Sbjct: 651 SKDRHRRERSRERR 664
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 42.4 bits (98), Expect = 9e-04
Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 24/269 (8%)
Query: 204 TKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQDEEVASDSDESSEGGERGDALSQK 263
T+ +V++ G E +E PL +D+ +L + + V+ D++E E L+
Sbjct: 1637 TEHDMVISTSPSGGSEADIE-GPLPAKDIHLDLPSNNNLVSKDTEEPLPVKESDQTLAAL 1695
Query: 264 RSEKPPAGSICRAEPEAGEEQAG----------DDRDSGGPVLQFDYEAVANRL--FEMA 311
S K +G P E ++ D P+L D E + + E
Sbjct: 1696 LSPKESSGGEKEVPPPPKETLPDSGFSANIEDINEADLVRPLLPKDMERLTSLRAGIEGP 1755
Query: 312 SRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQ 371
S ++R V+ + + A E++ + ++ + +K+KK K
Sbjct: 1756 LLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKD--THEKSKKNKN----- 1808
Query: 372 QERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQPRGRGQRGAR 431
R KGEKE R RS +R ++ ++R E A + + + R Q +R
Sbjct: 1809 --RDKGEKEKKRDSSLRSRS-KRSKSSEHKSRKRTSESRSRARKRSSKSKSH-RSQTRSR 1864
Query: 432 QRRRTPRPLTSARAKAANVQEPEKKKKRR 460
R R R + +R+K+ + K+K++R
Sbjct: 1865 SRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1893
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 42.4 bits (98), Expect = 9e-04
Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 24/269 (8%)
Query: 204 TKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQDEEVASDSDESSEGGERGDALSQK 263
T+ +V++ G E +E PL +D+ +L + + V+ D++E E L+
Sbjct: 1637 TEHDMVISTSPSGGSEADIE-GPLPAKDIHLDLPSNNNLVSKDTEEPLPVKESDQTLAAL 1695
Query: 264 RSEKPPAGSICRAEPEAGEEQAG----------DDRDSGGPVLQFDYEAVANRL--FEMA 311
S K +G P E ++ D P+L D E + + E
Sbjct: 1696 LSPKESSGGEKEVPPPPKETLPDSGFSANIEDINEADLVRPLLPKDMERLTSLRAGIEGP 1755
Query: 312 SRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQ 371
S ++R V+ + + A E++ + ++ + +K+KK K
Sbjct: 1756 LLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKD--THEKSKKNKN----- 1808
Query: 372 QERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQPRGRGQRGAR 431
R KGEKE R RS +R ++ ++R E A + + + R Q +R
Sbjct: 1809 --RDKGEKEKKRDSSLRSRS-KRSKSSEHKSRKRTSESRSRARKRSSKSKSH-RSQTRSR 1864
Query: 432 QRRRTPRPLTSARAKAANVQEPEKKKKRR 460
R R R + +R+K+ + K+K++R
Sbjct: 1865 SRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1893
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 42.0 bits (97), Expect = 0.001
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 354 EGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTA 413
EG+R++K K++++ +++ + EK E+KR R+R + E R E E+
Sbjct: 26 EGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREE--EEEEEE 83
Query: 414 ERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRR 460
E ++ GR ++ ++RRR +E EKKKKRR
Sbjct: 84 EEKEEEEKEEGRRRKKKKKRRR-------------KEEEEEKKKKRR 117
Score = 32.7 bits (73), Expect = 0.71
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 309 EMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLL 368
E R+ + +KR K +K ++ E+E EK EGRR+KK KK++R
Sbjct: 48 ETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRR-- 105
Query: 369 RLQQERGKGEKEPPSPGMERKRSRRR 394
K E+E E+K+ RRR
Sbjct: 106 -------KEEEE------EKKKKRRR 118
Score = 29.3 bits (64), Expect = 7.9
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 359 KKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALL 418
KK KK+K+ +E + E+E G +RK R+ E R E ++ T E
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEG-KRKEKRK-------EKRKEKEKKKKTKETEKR 52
Query: 419 RDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
+++ + R+R+R + R + +E EK+++ +E
Sbjct: 53 KEKEE---EEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKE 92
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 346 EKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAE 405
E+ R E +++K K++KR ++ER + E+E K R+R R +
Sbjct: 49 EREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQ 108
Query: 406 AG--EQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
G E+ ER + + R +R ++RR+ R R K +E ++KK+++E
Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKE 166
Score = 39.7 bits (91), Expect = 0.006
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 356 RRQKKTKKQKRLLRLQQERGKGEKEPPSP---GMERKRSRRRGVGADPEARAEAGEQPGT 412
RR+++ +K++R ++ERGK EK+ G ER+R R+ E R E +
Sbjct: 40 RREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKE-RREKERRKRK 98
Query: 413 AERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
E+ + RGR +R +++ R R + + + ++ KKK+R+E
Sbjct: 99 KEKKKRERKQRGRRER-KKKKERKERERENKQRRERKRKKRRKKKRRKE 146
Score = 37.7 bits (86), Expect = 0.022
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 10/163 (6%)
Query: 309 EMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLL 368
E R+ + R+R K +K + G E + E+ +R ++++ +K+++
Sbjct: 44 EKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKK 103
Query: 369 RLQQERGKGEKEPPSPGMER----------KRSRRRGVGADPEARAEAGEQPGTAERALL 418
R +++RG+ E++ ER KR +RR E + E +R
Sbjct: 104 RERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKR 163
Query: 419 RDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
+ + R + + R+ R+ R R + ++ +KKK R+
Sbjct: 164 KKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERK 206
Score = 36.6 bits (83), Expect = 0.049
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 371 QQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQPRGRGQRGA 430
+ ER K +E ER++ R+R G + + + E+ ER +++ + R +R
Sbjct: 33 ESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKR-KEREKQRKERRE 91
Query: 431 RQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
++RR+ + K +E +KKK+R+E
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKE 122
Score = 35.8 bits (81), Expect = 0.084
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 356 RRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAER 415
+R+ + KK++R ++ + E++ E+K+ ++R G + E + + E+ R
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90
Query: 416 ALLR------DQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRR 460
R + R R QRG R+R++ R N Q E+K+K+R
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERER---ENKQRRERKRKKR 138
Score = 30.0 bits (66), Expect = 4.6
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Query: 309 EMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLL 368
E ++ + RKR + ++ + G + + K R + RR++K KK+++
Sbjct: 83 EKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKK 142
Query: 369 R-----LQQERGKGE---KEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRD 420
R ++ERGK E K+ E+KR R R R E E+ ++ +
Sbjct: 143 RRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKK 202
Query: 421 QPRGRGQRGARQ 432
+ R + ++ RQ
Sbjct: 203 KERKKDRKTDRQ 214
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 40.8 bits (94), Expect = 0.003
Identities = 68/294 (23%), Positives = 113/294 (38%), Gaps = 63/294 (21%)
Query: 203 RTKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQDEEVASDSDESSEGGERGDALSQ 262
++ D+ L T + ++ ++A A DL + EE S+S SE D +
Sbjct: 148 KSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPE 207
Query: 263 KRS------EKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAVANRLFEMASRQST 316
K++ P G + P A + + D D P + A+A +S S+
Sbjct: 208 KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKP----EPVAMARSASSSSSSSSS 263
Query: 317 ---------PSQNRKRLYKVIRKLQDLAGGIFPEDEIP---------------------- 345
P + RK K + K + G P+ E P
Sbjct: 264 SDSDVSVKKPPRGRKPAEKPLPKPR----GRKPKPERPPSSSSSDSDSDEVDRISEWKRR 319
Query: 346 EKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAE 405
++A RR LE RR+++ +++ R LR Q++ K ER+R R AD R E
Sbjct: 320 DEARRRELEARRRREQEEELRRLREQEKEEK----------ERRRER-----AD---RGE 361
Query: 406 AGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
A G + LR+ +RG + R R P + + +A +E +K K+
Sbjct: 362 AERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK 415
Score = 40.4 bits (93), Expect = 0.003
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 244 ASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAV 303
+SDSD S + RG ++K KP + +PE + D DS
Sbjct: 263 SSDSDVSVKKPPRGRKPAEKPLPKPRGR---KPKPERPPSSSSSDSDSDE---------- 309
Query: 304 ANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKK 363
+R+ E R R+R + R+ + E+ RRL E +++K ++
Sbjct: 310 VDRISEWKRRDEA----RRRELEARRRREQ------------EEELRRLREQEKEEKERR 353
Query: 364 QKRLLRLQQERGKGE------KEPPSPGMER-KRSRRRGVGADPEARAEAGEQPGTAERA 416
++R R + ERG G +E P +R ++ R RG + ++ EA + + A
Sbjct: 354 RERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSA 413
Query: 417 LLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKK 458
R Q+ + RP +AK V+ K+ +
Sbjct: 414 KKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSE 455
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/251 (21%), Positives = 94/251 (37%), Gaps = 21/251 (8%)
Query: 222 VEQAPLAIEDLLNELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAG 281
+EQ LA + + + +D+ + + S E ER + +++S P R+ P
Sbjct: 136 IEQEKLA--SMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRR--RSSPVRR 191
Query: 282 EEQAGDDRD------SGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLA 335
E + R S P + + L E + + PS I K+
Sbjct: 192 ERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPE 251
Query: 336 GGIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRG 395
P++ PEK ++ ++K K + R + R + PS R+R R R
Sbjct: 252 PIPEPKEPSPEKNSKK-----EKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRS 306
Query: 396 VGADPEARAEAGEQPGTAERALLRDQP----RGRGQRGARQRRRTPRPL--TSARAKAAN 449
P R +P R R P R + R+RRR+ L +S+ + ++
Sbjct: 307 RSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSR 366
Query: 450 VQEPEKKKKRR 460
+ P KK +R
Sbjct: 367 SRSPPKKPPKR 377
Score = 33.5 bits (75), Expect = 0.42
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 385 GMERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSAR 444
G RS R P R +P A + P RG + QRR++P P T
Sbjct: 663 GSSPSRSTREARSPQPNKRHSPSPRP-RAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPI 721
Query: 445 AKAANVQEPEKKKK 458
+ + EP+K KK
Sbjct: 722 RRVSRTPEPKKIKK 735
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 40.8 bits (94), Expect = 0.003
Identities = 68/294 (23%), Positives = 113/294 (38%), Gaps = 63/294 (21%)
Query: 203 RTKDSLVLNNITRGIFETIVEQAPLAIEDLLNELDTQDEEVASDSDESSEGGERGDALSQ 262
++ D+ L T + ++ ++A A DL + EE S+S SE D +
Sbjct: 148 KSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSDQDFTPE 207
Query: 263 KRS------EKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAVANRLFEMASRQST 316
K++ P G + P A + + D D P + A+A +S S+
Sbjct: 208 KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKP----EPVAMARSASSSSSSSSS 263
Query: 317 ---------PSQNRKRLYKVIRKLQDLAGGIFPEDEIP---------------------- 345
P + RK K + K + G P+ E P
Sbjct: 264 SDSDVSVKKPPRGRKPAEKPLPKPR----GRKPKPERPPSSSSSDSDSDEVDRISEWKRR 319
Query: 346 EKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAE 405
++A RR LE RR+++ +++ R LR Q++ K ER+R R AD R E
Sbjct: 320 DEARRRELEARRRREQEEELRRLREQEKEEK----------ERRRER-----AD---RGE 361
Query: 406 AGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
A G + LR+ +RG + R R P + + +A +E +K K+
Sbjct: 362 AERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK 415
Score = 40.4 bits (93), Expect = 0.003
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 244 ASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAV 303
+SDSD S + RG ++K KP + +PE + D DS
Sbjct: 263 SSDSDVSVKKPPRGRKPAEKPLPKPRGR---KPKPERPPSSSSSDSDSDE---------- 309
Query: 304 ANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKK 363
+R+ E R R+R + R+ + E+ RRL E +++K ++
Sbjct: 310 VDRISEWKRRDEA----RRRELEARRRREQ------------EEELRRLREQEKEEKERR 353
Query: 364 QKRLLRLQQERGKGE------KEPPSPGMER-KRSRRRGVGADPEARAEAGEQPGTAERA 416
++R R + ERG G +E P +R ++ R RG + ++ EA + + A
Sbjct: 354 RERADRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSA 413
Query: 417 LLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKK 458
R Q+ + RP +AK V+ K+ +
Sbjct: 414 KKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSE 455
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 40.4 bits (93), Expect = 0.003
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 16/230 (6%)
Query: 235 ELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGP 294
E Q+EE + D S E S E+ + E EE+ R+
Sbjct: 792 ENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYS-EMSEEKRAKLREIELK 850
Query: 295 VLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRK--LQDLAGGIFPEDEIPEKACRRL 352
V++F E E R P Q+ + + R LQ + +K +
Sbjct: 851 VMKFQDE------LESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEK 904
Query: 353 LEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEA----RAEAGE 408
LE R + K +K + ++ER + PSP R S RR P++ R+E
Sbjct: 905 LESRSKDKKEKDE-CTPTRKERKRRHSTSPSPS--RSSSGRRVKSPSPKSERSERSERSH 961
Query: 409 QPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKK 458
+ + R+ +D PR ++ R + P S R+++ + ++ KK +
Sbjct: 962 KESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSR 1011
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 39.7 bits (91), Expect = 0.006
Identities = 46/237 (19%), Positives = 96/237 (40%), Gaps = 19/237 (8%)
Query: 235 ELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGP 294
+L ++E++ + E ER + + + + EPE Q + +
Sbjct: 935 QLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEE 994
Query: 295 VLQFDYEAVANRLFEMASRQSTPSQNRK------------RLYKVIRKLQDLAGGIFPED 342
LQ + E + E RQ Q RK R + R+LQ+ E+
Sbjct: 995 ELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEE 1054
Query: 343 EIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEA 402
E+ ++ + L E R ++ ++ +R R ++E + E++ E++R + R E
Sbjct: 1055 ELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQER------ER 1108
Query: 403 RAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
+ E+ E LLR++ R ++ ++ R + + +EPEK++++
Sbjct: 1109 QCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLR-EEPEKRRRQ 1164
Score = 39.3 bits (90), Expect = 0.008
Identities = 60/240 (25%), Positives = 99/240 (41%), Gaps = 18/240 (7%)
Query: 230 EDLLNELDTQ--DEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGD 287
++ L + D Q DEE+ E E ER Q +S K E + + +
Sbjct: 158 QERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLE 217
Query: 288 DRDSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKR---LYKVIRKLQD----LAGGIFP 340
R G Q +R+F+ + + RKR L K KLQ+ +
Sbjct: 218 LRRKGREEKQQQRRERQDRVFQ----EEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQE 273
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADP 400
E+E K R+ L RQ++ ++Q+RL R QQ R K E+E ER+ + R
Sbjct: 274 EEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQER-----R 328
Query: 401 EARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRR 460
E + E EQ E+ R+Q R Q R+ ++ R R + +E + +++++
Sbjct: 329 EQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQ 388
Score = 39.3 bits (90), Expect = 0.008
Identities = 49/229 (21%), Positives = 92/229 (40%), Gaps = 28/229 (12%)
Query: 239 QDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQF 298
Q+EE +E E ER + ++R ++ R E + EQ + R+
Sbjct: 310 QEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERRE-------- 361
Query: 299 DYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQ 358
+ + E Q + + R + +R+ Q L E+ RR + RR+
Sbjct: 362 --QQLRREQEEERREQQLRREQQLRREQQLRREQQLRR---------EQQLRREQQLRRE 410
Query: 359 KKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEAR--------AEAGEQP 410
++ +++++L R QQ R + E+E E++R +R E R E EQ
Sbjct: 411 QQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQE 470
Query: 411 GTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
++ L RDQ R +R + R R + ++ E++++R
Sbjct: 471 -RRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQR 518
Score = 34.7 bits (78), Expect = 0.19
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRG--VGA 398
E+E E+ RR + RR+++ ++++RL R ++E ++ + R++ RR +
Sbjct: 493 EEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKR 552
Query: 399 DPEAR--AEAGEQPGTAERALLRDQPRGRGQRGARQR-RRTPRPLTSARAKAANVQEPEK 455
+ E R E EQ E+ RDQ R + +QR +R R K V+ E+
Sbjct: 553 EEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQ 612
Query: 456 KKKRRE 461
+++R +
Sbjct: 613 EERREQ 618
Score = 34.7 bits (78), Expect = 0.19
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 235 ELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSG-G 293
E + + + S+ E ER + L ++ EK R E E E++ +++
Sbjct: 524 EEERLQQRLRSEQQLRREQEERREQLLKREEEK-------RLEQERREQRLKREQEERRD 576
Query: 294 PVLQFDYEAVANRLF---EMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACR 350
+L+ + E RL E Q + +RL + R+ Q L + E PE+ R
Sbjct: 577 QLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRL------KREEPEEERR 630
Query: 351 RLLEGRRQKKTKKQKRLLRLQQERGKG--EKEPPSPGMERKRSRRRGVGADPEARAEAGE 408
+ L +++ ++Q++L R QQER + ++E +E++ R + AE E
Sbjct: 631 QQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEE-E 689
Query: 409 QPGTAERALLRD---QPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
Q ER R Q + + ARQ + RP + QE E+K++RRE
Sbjct: 690 QEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRR--QEQEEKRRRRE 743
Score = 32.7 bits (73), Expect = 0.71
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 248 DESSEGGERGDALSQKRSEKP--PAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAVAN 305
++ + ER D + Q+ EK ++ R E EE+ ++ LQ + E +
Sbjct: 225 EKQQQRRERQDRVFQEEEEKEWRKRETVLRKE----EEKLQEEEPQRQRELQEEEEQLRK 280
Query: 306 ---RLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTK 362
+ ++ Q R R + +R+ Q+ E+ ++ RR + RR+++ +
Sbjct: 281 LERQELRRERQEEEQQQQRLRREQQLRRKQE-------EERREQQEERREQQERREQQEE 333
Query: 363 KQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRDQP 422
++++ LR +QE + ++ ER+ + R E E EQ E+ L R+Q
Sbjct: 334 RREQQLRREQEERREQQLRREQEEERREQQLR-----REQEEERREQQLRREQQLRREQQ 388
Query: 423 RGRGQRGAR-QRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
R Q+ R Q+ R + L + Q +++ RRE
Sbjct: 389 LRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRRE 428
Score = 31.6 bits (70), Expect = 1.6
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 346 EKACRRLLEGRRQKKTK------KQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGAD 399
E+ R + RR+++ K +++R L+L++E + ++E + R++ RR
Sbjct: 461 EEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLK 520
Query: 400 PEARAEAGEQPGTAERALLRDQPRGRGQRGAR-QRRRTPRPLTSARAKAANVQEPEKKKK 458
+ E +Q +E+ L R+Q R Q R + +R + R K + ++ K
Sbjct: 521 RQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLK 580
Query: 459 RRE 461
R E
Sbjct: 581 REE 583
Score = 31.6 bits (70), Expect = 1.6
Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 15/242 (6%)
Query: 235 ELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGP 294
EL ++E++ + E E ++ + + R EPE Q + +
Sbjct: 1115 ELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEE 1174
Query: 295 VLQFDYEAVAN---------RLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIP 345
LQ + E + R + + Q RK+ Y+ + DL PE E
Sbjct: 1175 ELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENA 1234
Query: 346 EKACRRLLEGRRQKKTKK----QKRLLRLQQERGK--GEKEPPSPGMERKRSRRRGVGAD 399
+ + +GR ++ ++ Q R + QQ+ GE++ ER+R ++R
Sbjct: 1235 VRDNKVYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFP 1294
Query: 400 PEARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKR 459
E + E EQ R + + + ++RR R + +QE E++ R
Sbjct: 1295 EEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLR 1354
Query: 460 RE 461
R+
Sbjct: 1355 RQ 1356
Score = 29.3 bits (64), Expect = 7.9
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 219 ETIVEQAPLAIEDLLNELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEP 278
E I + P L +E D + +V S EG R +KR + + E
Sbjct: 695 ERIKSRIPKWQWQLESEADARQSKVYS-RPRKQEGQRRRQEQEEKRRRRE--SELQWQEE 751
Query: 279 EAGEEQAGDDRDSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGI 338
E Q ++ Q+ E + R + S + + R+R + + Q
Sbjct: 752 ERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEER-QQREQRF 810
Query: 339 FPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRR 394
PE+E EK RR R+K+ + + +LQ+ + + G++ + RRR
Sbjct: 811 LPEEE--EKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRR 864
>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
sapiens]
Length = 346
Score = 39.7 bits (91), Expect = 0.006
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 46/247 (18%)
Query: 253 GGERGDALSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDYEAVANRLFEMAS 312
GG +L R P + A +AGE++ G + + Y V F+
Sbjct: 39 GGPSHSSLPVGRRHPPVLRMVLEAL-QAGEQRRGTSVAAIKLYILHKYPTVDVLRFKYLL 97
Query: 313 RQSTPSQNRKRLYKVIRKLQDLAGG--------------IFPEDEIPEKACRRLLE--GR 356
+Q+ + R+ L + R L A G I P P A RR E G+
Sbjct: 98 KQALATGMRRGL--LARPLNSKARGATGSFKLVPKHKKKIQPRKMAPATAPRRAGEAKGK 155
Query: 357 RQKKTKKQK-------RLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGE- 408
KK + K ++ + + K +K PP PG +++R++G GA + RA++GE
Sbjct: 156 GPKKPSEAKEDPPNVGKVKKAAKRPAKVQKPPPKPGAATEKARKQG-GAAKDTRAQSGEA 214
Query: 409 -----QPGTAERAL-----LRDQPRGRGQRG----ARQRRRTPRPLTSARAKAANVQ--- 451
+P A RA L + + +G R A R+T S++ A+ V+
Sbjct: 215 RKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAESKSSKPTASKVKNGA 274
Query: 452 -EPEKKK 457
P KKK
Sbjct: 275 ASPTKKK 281
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 39.3 bits (90), Expect = 0.008
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 32/164 (19%)
Query: 287 DDRDSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPE 346
D+R P+ D + R SR+ + R+R R+ + + +
Sbjct: 220 DERPGPSPLPHRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSR---------D 270
Query: 347 KACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEA 406
K RR R + K + +KR +ER + E+E ++ RG G D +EA
Sbjct: 271 KEERRRSRERSKDKDRDRKRRSSRSRERARRERE--------RKEELRGGGGDMAEPSEA 322
Query: 407 GEQP---------------GTAERALLRDQPRGRGQRGARQRRR 435
G+ P G E+ RD+ R R R R+RRR
Sbjct: 323 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRR 366
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 39.3 bits (90), Expect = 0.008
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 342 DEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGV----- 396
+E+ EK +R E R ++ KK+K QER + EKE ER+R RRR
Sbjct: 228 EELKEKLRKRTEEPDRDERLKKEK------QEREEREKEREREREERERKRRREEEEREK 281
Query: 397 --GADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQR-RRTPRPLTSARAKAANVQEP 453
D E R + + + R R R R + +R R RR R R+++ + E
Sbjct: 282 ERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER 341
Query: 454 EKKKKRRE 461
+ + + R+
Sbjct: 342 KHRSRSRD 349
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 39.3 bits (90), Expect = 0.008
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 342 DEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGV----- 396
+E+ EK +R E R ++ KK+K QER + EKE ER+R RRR
Sbjct: 228 EELKEKLRKRTEEPDRDERLKKEK------QEREEREKEREREREERERKRRREEEEREK 281
Query: 397 --GADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQR-RRTPRPLTSARAKAANVQEP 453
D E R + + + R R R R + +R R RR R R+++ + E
Sbjct: 282 ERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER 341
Query: 454 EKKKKRRE 461
+ + + R+
Sbjct: 342 KHRSRSRD 349
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 38.9 bits (89), Expect = 0.010
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 346 EKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAE 405
E+ +R E +++T++Q+ R ++ + + ++E +R R R+R + E +
Sbjct: 61 ERDRQRQRERETERETERQRERQRQRERKRQTDRERDK---DRDRERKRETDRNRERNRK 117
Query: 406 AG-EQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
G E+ ER R++ R R + RQR+R + T + +E KK++++E
Sbjct: 118 GGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKE 174
Score = 35.4 bits (80), Expect = 0.11
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 346 EKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAE 405
E+ R E +RQ++ K+Q +ER K +R R R R G + + + E
Sbjct: 73 ERETERQRERQRQRERKRQT-----DRERDKDRDRERKRETDRNRERNRKGGRERDKQTE 127
Query: 406 AGEQPGTAERALLRDQPRGRGQRGARQRRR-----TPRPLTSARAKAANVQEPEKKKKRR 460
ER R++ R R + RQR R R + R + ++ E+KK+R+
Sbjct: 128 R-------ERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERK 180
Query: 461 E 461
E
Sbjct: 181 E 181
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 38.9 bits (89), Expect = 0.010
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 251 SEGGERGDALSQKRSEKPPAGSICRAEPEAGE--EQAGDDRDSGGPVLQFDYEAVA-NRL 307
S+ ++ + ++ ++EKP A + AEP+A + E A + + L+ D A ++
Sbjct: 1760 SKPAQKSEEANEPKAEKPDATA--DAEPDANQKAEAAPESQPPASEDLEVDPPVAAKDKK 1817
Query: 308 FEMASRQSTPSQNRKRLY---KVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKKTKKQ 364
+ R TP Q V RK + + P ++LLE + + +
Sbjct: 1818 PNKSKRSKTPVQAAAVSIVEKPVTRKSERIDREKLKRSNSPRGEAQKLLELKMEAE---- 1873
Query: 365 KRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGA------DPEARA---EAGEQPGTAER 415
++ R + + E P P + R+RRR V + D E R+ E EQP +
Sbjct: 1874 -KITRTASKNSAADLEHPEPSLPLSRTRRRNVRSVYATMGDHENRSPVKEPVEQPRVTRK 1932
Query: 416 ALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKK 457
L R+ +R R P+ R +A +E E K+
Sbjct: 1933 RLERELQEAAAVPTTPRRGRPPK----TRRRADEEEENEAKE 1970
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 38.5 bits (88), Expect = 0.013
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 12/234 (5%)
Query: 219 ETIVEQAPLAIEDLLNELDTQDEEV-ASDSDESSEGGERGDALSQKRSEKPPAGSICRAE 277
E +VEQ A E+L +L ++EE+ A+ + EGG R L R + ++ A+
Sbjct: 1094 EQMVEQQQRA-EELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQ---AALAEAQ 1149
Query: 278 PEAGEEQAGDDR-DSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAG 336
+ E+ + + L + EA+ L + + ST +Q R K +++ +L
Sbjct: 1150 EDLESERVARTKAEKQRRDLGEELEALRGELED--TLDSTNAQQELRS-KREQEVTELKK 1206
Query: 337 GIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGV 396
+ E I E A + L + Q + ++L Q RGKG E +E + S R
Sbjct: 1207 TLEEETRIHEAAVQELRQRHGQALGELAEQLE--QARRGKGAWEKTRLALEAEVSELRAE 1264
Query: 397 GADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANV 450
+ + + GEQ L + +GR G R R L A+A+ NV
Sbjct: 1265 LSSLQTARQEGEQ-RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENV 1317
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 38.5 bits (88), Expect = 0.013
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 12/234 (5%)
Query: 219 ETIVEQAPLAIEDLLNELDTQDEEV-ASDSDESSEGGERGDALSQKRSEKPPAGSICRAE 277
E +VEQ A E+L +L ++EE+ A+ + EGG R L R + ++ A+
Sbjct: 1086 EQMVEQQQRA-EELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQ---AALAEAQ 1141
Query: 278 PEAGEEQAGDDR-DSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAG 336
+ E+ + + L + EA+ L + + ST +Q R K +++ +L
Sbjct: 1142 EDLESERVARTKAEKQRRDLGEELEALRGELED--TLDSTNAQQELRS-KREQEVTELKK 1198
Query: 337 GIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGV 396
+ E I E A + L + Q + ++L Q RGKG E +E + S R
Sbjct: 1199 TLEEETRIHEAAVQELRQRHGQALGELAEQLE--QARRGKGAWEKTRLALEAEVSELRAE 1256
Query: 397 GADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANV 450
+ + + GEQ L + +GR G R R L A+A+ NV
Sbjct: 1257 LSSLQTARQEGEQ-RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENV 1309
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 38.5 bits (88), Expect = 0.013
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 12/234 (5%)
Query: 219 ETIVEQAPLAIEDLLNELDTQDEEV-ASDSDESSEGGERGDALSQKRSEKPPAGSICRAE 277
E +VEQ A E+L +L ++EE+ A+ + EGG R L R + ++ A+
Sbjct: 1127 EQMVEQQQRA-EELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQ---AALAEAQ 1182
Query: 278 PEAGEEQAGDDR-DSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAG 336
+ E+ + + L + EA+ L + + ST +Q R K +++ +L
Sbjct: 1183 EDLESERVARTKAEKQRRDLGEELEALRGELED--TLDSTNAQQELRS-KREQEVTELKK 1239
Query: 337 GIFPEDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGV 396
+ E I E A + L + Q + ++L Q RGKG E +E + S R
Sbjct: 1240 TLEEETRIHEAAVQELRQRHGQALGELAEQLE--QARRGKGAWEKTRLALEAEVSELRAE 1297
Query: 397 GADPEARAEAGEQPGTAERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANV 450
+ + + GEQ L + +GR G R R L A+A+ NV
Sbjct: 1298 LSSLQTARQEGEQ-RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENV 1350
>gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens]
Length = 1123
Score = 38.5 bits (88), Expect = 0.013
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 27/257 (10%)
Query: 226 PLAIEDLLNELDTQDEEVASD-----SDESSEGGERGDALSQKRSEKPPAGSICRAEPEA 280
P DL + + T VAS + S + L S P S P
Sbjct: 712 PSPSSDLTHPMKTSHPVVASTWPVHRARAVSPAPQSSSRLQPPFSPHPTLLSSTPKPPGT 771
Query: 281 GEEQAGDDRDSGGPVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFP 340
E ++ + P + D ++ ++L E + +PS+ RK+ + + + Q L
Sbjct: 772 SEPRSCSSISTALPQVNEDLVSLPHQLPEASEPPQSPSEKRKKTF--VGEPQRLGSETRL 829
Query: 341 EDEIPEKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRS------RRR 394
I E + +R+KK + + QE G+ +++P SP R+ RR+
Sbjct: 830 PQHIREATAAPHGKRKRKKKKRPEDTAASALQE-GQTQRQPGSPMYRREGQAQLPAVRRQ 888
Query: 395 GVGADPEARAEAGEQPG-------TAERALLRDQPRGRGQRGARQR---RRTPRPLTSAR 444
G P+ G+Q G + R R G G+ G + R + P+
Sbjct: 889 EDGTQPQVN---GQQVGCVTDGHHASSRKRRRKGAEGLGEEGGLHQDPLRHSCSPMGDGD 945
Query: 445 AKAANVQEPEKKKKRRE 461
+A +KKKK+R+
Sbjct: 946 PEAMEESPRKKKKKKRK 962
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 38.5 bits (88), Expect = 0.013
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 18/287 (6%)
Query: 175 EELTKVGAEELTADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLLN 234
E T ++ D F++ R R + L + F+ + A L++
Sbjct: 78 EAKTTTTNTQVEGDDEAAFLERLARREERRQKRLQEALERQKEFDPTITDASLSLPSRRM 137
Query: 235 ELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICR-AEPEAGEEQAGDDRDSGG 293
+ DT + E ++S ER + + K + R AE E++ ++ +
Sbjct: 138 QNDTAENETTEKEEKSESRQERYEIEETETVTKSYQKNDWRDAEENKKEDKEKEEEEEEK 197
Query: 294 PVLQFDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLL 353
P E N++ M ++T SQ V+ L++ G I E+ E+ +
Sbjct: 198 PKRGSIGE---NQVEVMVEEKTTESQEET----VVMSLKN--GQISSEEPKQEEEREQGS 248
Query: 354 EGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTA 413
+ + +++ R + ER + E E ER ++ + AD AR EA E+
Sbjct: 249 DEISHHEKMEEEDKERAEAERARLEAEE----RERIKAEQDKKIADERARIEAEEKAAAQ 304
Query: 414 ER----ALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKK 456
ER A R++ R +R A +R+R A + ++E EK+
Sbjct: 305 ERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKR 351
Score = 29.3 bits (64), Expect = 7.9
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 358 QKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADP----EARAEAGEQPGTA 413
+K T+ Q+ + + + G+ E P ER++ G+D E E ++ A
Sbjct: 214 EKTTESQEETVVMSLKNGQISSEEPKQEEEREQ------GSDEISHHEKMEEEDKERAEA 267
Query: 414 ERALLRDQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRRE 461
ERA L + R R + ++ R A KAA + ++ + RE
Sbjct: 268 ERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEERE 315
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 38.1 bits (87), Expect = 0.017
Identities = 47/253 (18%), Positives = 103/253 (40%), Gaps = 23/253 (9%)
Query: 230 EDLLNELDTQDEEVASDSDESSEGGERGDALSQKRSEKPPAGSICRAEPEAGE------E 283
+D N+L + + A S++ +G E + S+K E+ S + E+ E
Sbjct: 140 DDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKG 199
Query: 284 QAGDDRDSGGPVLQ---------FDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDL 334
Q + ++ GP ++ F + VA + E R+ K + +++ ++L
Sbjct: 200 QKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEEL 259
Query: 335 AGGIFPEDEIPEKACRRLLEGRRQK-KTKKQKRLLRLQQERGK--GEKEPPSPGMERKRS 391
G +D+ +K +R E K K ++ +E+ + E + G ++K+
Sbjct: 260 ETG--KKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKD 317
Query: 392 RRRGVGADPEARAEAGEQPGTAERALLRD---QPRGRGQRGARQRRRTPRPLTSARAKAA 448
+++ G E E + P A +++ + + +R R+ + L AK
Sbjct: 318 KKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRK 377
Query: 449 NVQEPEKKKKRRE 461
+ E++K+ R+
Sbjct: 378 EEERLEQEKRERK 390
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 37.4 bits (85), Expect = 0.029
Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 21/229 (9%)
Query: 244 ASDSDESSEGGERGDA---LSQKRSEKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQFDY 300
A+ +S G RG L ++ AG+ R AGE+ A R GP
Sbjct: 255 AATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGP------ 308
Query: 301 EAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRRQKK 360
+++ + P + ++ K GG + + R+ + RR KK
Sbjct: 309 KSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKK-QRRRGKK 367
Query: 361 TKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQPGTAERALLRD 420
++QK + RG G+K+ R R++ +P RA+ + P R
Sbjct: 368 PRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQ--KAPAAKPRGGGSK 425
Query: 421 QPRGRGQRGARQR---------RRTPRPLTSARAKAANVQEPEKKKKRR 460
+PR RG + A+ R ++ R AR KAA + K++
Sbjct: 426 KPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQ 474
Score = 33.9 bits (76), Expect = 0.32
Identities = 53/233 (22%), Positives = 89/233 (38%), Gaps = 26/233 (11%)
Query: 241 EEVASDSDESSEGGERGDALSQKRS---EKPPAGSICRAEPEAGEEQAGDDRDSGGPVLQ 297
+ A+ S G ++ A + +S EKP + A+ +G++ S G
Sbjct: 144 KSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGD--- 200
Query: 298 FDYEAVANRLFEMASRQSTPSQNRKRLYKVIRKLQDLAGGIFPEDEIPEKACRRLLEGRR 357
E R E SR R++ + R+ + AGG +K ++ G++
Sbjct: 201 ---EDKKGRQREAKSRFGKTRGGRRKKH---RRPKPAAGGAKSRRGGGKKPQKQRRRGQK 254
Query: 358 QKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRS--RRRGV---GADPEARAEAGEQPGT 412
K R+ + RG G+K+ G + +RRG G P A+ G P +
Sbjct: 255 AATGGKS----RVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKS 310
Query: 413 AERALLR-----DQPRGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKKKRR 460
R +PR RGQ+ + + + KAA V +KK+RR
Sbjct: 311 LGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRR 363
Score = 33.9 bits (76), Expect = 0.32
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 346 EKACRRLLEGRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAE 405
EK + G + + KK +R +G K S G E K+ R+R EA++
Sbjct: 172 EKPQKAAAAGAKSRSGKKPRR---------RGAK---SRGDEDKKGRQR------EAKSR 213
Query: 406 AGEQPGTAERALLRDQP--------RGRGQRGARQRRRTPRPLTSARAKAANVQEPEKKK 457
G+ G + R +P RG G++ +QRRR + T +++ + KK
Sbjct: 214 FGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKK 273
Query: 458 KRRE 461
RR+
Sbjct: 274 LRRQ 277
Score = 31.6 bits (70), Expect = 1.6
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 355 GRRQKKTKKQKRLLRLQQERGKGEKEPPSPGMERKRSRRRGVGADPEARAEAGEQP---- 410
G KK ++QK ++ R +G+K + G E ++ ++ GA GEQ
Sbjct: 53 GSGDKKLRRQKAAAGGKKARLRGQKGAVA-GKEARQHWQKAAGAGGAENRGGGEQKAAAA 111
Query: 411 GTAERALLRDQPRGRGQRGARQRRRTPR 438
GT +PR RGQ+ A + PR
Sbjct: 112 GTKSLGGRGRKPRRRGQKAAATGSKKPR 139
>gi|4826894 phosphodiesterase 1C [Homo sapiens]
Length = 634
Score = 37.4 bits (85), Expect = 0.029
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 223 EQAPLAIEDLLNELD--TQDEEVASDSDESSEGGERGDALSQKRSEKP--PAGSICRAEP 278
E+A LA E+ E++ +Q EE AS E GE + ++ R+ K P G +AE
Sbjct: 537 EKARLAAEEQQKEMEAKSQAEEGASGKAEKKTSGETKNQVNGTRANKSDNPRGKNSKAEK 596
Query: 279 EAGEEQA-GDDRDSGGPVLQFDYEAVAN 305
+GE+Q GD +D + D+ + N
Sbjct: 597 SSGEQQQNGDFKDGKNKTDKKDHSNIGN 624
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,042,815
Number of Sequences: 37866
Number of extensions: 876522
Number of successful extensions: 7014
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 5815
Number of HSP's gapped (non-prelim): 1163
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.