RRP1 28536

Name: RRP1	Sequence: fasta or formatted (461aa)		NCBI GI: 4503247
Description: ribosomal RNA processing 1 homolog		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 38 2 C cysteine 0.9 4 1 D aspartate 4.8 22 2 E glutamate 10.8 50 2 F phenylalanine 3.0 14 1 G glycine 6.7 31 2 H histidine 1.1 5 1 I isoleucine 3.9 18 1 K lysine 6.7 31 4 L leucine 10.4 48 2 M methionine 2.4 11 1 N asparagine 2.4 11 2 P proline 5.0 23 2 Q glutamine 7.2 33 2 R arginine 11.3 52 3 S serine 4.6 21 2 T threonine 4.3 20 2 V valine 4.1 19 1 W tryptophan 1.1 5 1 Y tyrosine 1.1 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ribosomal RNA processing 1 homolog RRP1B 0.413 ribosomal RNA processing 1 homolog B LOC100133599 0.024 PREDICTED: hypothetical protein TAOK2 0.020 TAO kinase 2 isoform 1 TAOK2 0.020 TAO kinase 2 isoform 2 LOC100286959 0.020 PREDICTED: hypothetical protein XP_002343921 SFRS17A 0.019 DNA segment on chromosome X and Y (unique) 155 expre... SON 0.019 SON DNA-binding protein isoform F SON 0.019 SON DNA-binding protein isoform B LOC100294088 0.019 PREDICTED: hypothetical protein, partial LOC100133599 0.019 PREDICTED: hypothetical protein HDGF2 0.018 hepatoma-derived growth factor-related protein 2 iso... SRRM1 0.018 serine/arginine repetitive matrix 1 HDGF2 0.018 hepatoma-derived growth factor-related protein 2 iso... SR140 0.017 U2-associated SR140 protein TCHH 0.017 trichohyalin H1FOO 0.017 H1 histone family, member O, oocyte-specific SNRNP70 0.016 U1 small nuclear ribonucleoprotein 70 kDa CROP 0.016 cisplatin resistance-associated overexpressed protei... CROP 0.016 cisplatin resistance-associated overexpressed protei... LOC100131202 0.016 PREDICTED: hypothetical protein SPEN 0.016 spen homolog, transcriptional regulator MYH14 0.016 myosin, heavy chain 14 isoform 1 MYH14 0.016 myosin, heavy chain 14 isoform 2 MYH14 0.016 myosin, heavy chain 14 isoform 3 USP36 0.016 ubiquitin specific peptidase 36 CALD1 0.016 caldesmon 1 isoform 1 EIF5B 0.015 eukaryotic translation initiation factor 5B LOC100292370 0.014 PREDICTED: hypothetical protein PDE1C 0.014 phosphodiesterase 1C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.