Guide to the Human Genome
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Name: CDKN2D Sequence: fasta or formatted (166aa) NCBI GI: 4502753
Description:

cyclin-dependent kinase inhibitor 2D

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [166aa] cyclin-dependent kinase inhibitor 2D
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         21           3
 C cysteine            0.0          0           0
 D aspartate           7.2         12           1
 E glutamate           5.4          9           2
 F phenylalanine       2.4          4           1
 G glycine             9.0         15           1
 H histidine           4.8          8           1
 I isoleucine          1.8          3           1
 K lysine              1.8          3           1
 L leucine            15.1         25           2
 M methionine          2.4          4           2
 N asparagine          1.8          3           1
 P proline             4.2          7           1
 Q glutamine           4.8          8           1
 R arginine            7.2         12           2
 S serine              4.2          7           1
 T threonine           5.4          9           1
 V valine              9.6         16           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase inhibitor 2D 
CDKN2D                1.000   cyclin-dependent kinase inhibitor 2D 
CDKN2C                0.358   cyclin-dependent kinase inhibitor 2C 
CDKN2C                0.358   cyclin-dependent kinase inhibitor 2C 
CDKN2B                0.261   cyclin-dependent kinase inhibitor 2B isoform 1 [Homo...
CDKN2A                0.258   cyclin-dependent kinase inhibitor 2A isoform 1 
ANK3                  0.214   ankyrin 3 isoform 1 
ANK2                  0.197   ankyrin 2 isoform 3 
ANK2                  0.197   ankyrin 2 isoform 2 
ANK2                  0.197   ankyrin 2 isoform 1 
ANK1                  0.181   ankyrin 1 isoform 9 
ANK1                  0.181   ankyrin 1 isoform 1 
ANK1                  0.181   ankyrin 1 isoform 3 
ANK1                  0.181   ankyrin 1 isoform 2 
ANK1                  0.181   ankyrin 1 isoform 4 
ANKRD52               0.157   ankyrin repeat domain 52 
ASB14                 0.157   ankyrin repeat and SOCS box-containing 14 isoform 1...
HACE1                 0.157   HECT domain and ankyrin repeat containing, E3 ubiqu...
TNKS                  0.154   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.151   ankyrin repeat and kinase domain containing 1 
TNKS2                 0.151   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD2                0.151   ankyrin repeat domain 2 isoform a 
CASKIN1               0.144   CASK interacting protein 1 
RAI14                 0.144   retinoic acid induced 14 isoform d 
RAI14                 0.144   retinoic acid induced 14 isoform c 
RAI14                 0.144   retinoic acid induced 14 isoform b 
RAI14                 0.144   retinoic acid induced 14 isoform a 
RAI14                 0.144   retinoic acid induced 14 isoform a 
RAI14                 0.144   retinoic acid induced 14 isoform a 
ANKRD1                0.144   cardiac ankyrin repeat protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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