Guide to the Human Genome
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Name: CDKN2C Sequence: fasta or formatted (168aa) NCBI GI: 17981699
Description:

cyclin-dependent kinase inhibitor 2C

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [168aa] cyclin-dependent kinase inhibitor 2C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.1         22           3
 C cysteine            0.6          1           1
 D aspartate           5.4          9           1
 E glutamate           6.0         10           1
 F phenylalanine       3.0          5           1
 G glycine             9.5         16           2
 H histidine           3.6          6           1
 I isoleucine          1.8          3           1
 K lysine              3.0          5           1
 L leucine            14.3         24           3
 M methionine          1.8          3           1
 N asparagine          9.5         16           2
 P proline             2.4          4           1
 Q glutamine           4.8          8           1
 R arginine            6.5         11           2
 S serine              2.4          4           1
 T threonine           4.8          8           1
 V valine              6.5         11           2
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase inhibitor 2C 
CDKN2C                1.000   cyclin-dependent kinase inhibitor 2C 
CDKN2D                0.345   cyclin-dependent kinase inhibitor 2D 
CDKN2D                0.345   cyclin-dependent kinase inhibitor 2D 
CDKN2A                0.219   cyclin-dependent kinase inhibitor 2A isoform 1 
CDKN2B                0.213   cyclin-dependent kinase inhibitor 2B isoform 1 [Homo...
RAI14                 0.194   retinoic acid induced 14 isoform d 
RAI14                 0.194   retinoic acid induced 14 isoform c 
RAI14                 0.194   retinoic acid induced 14 isoform b 
RAI14                 0.194   retinoic acid induced 14 isoform a 
RAI14                 0.194   retinoic acid induced 14 isoform a 
RAI14                 0.194   retinoic acid induced 14 isoform a 
ANKRD50               0.187   ankyrin repeat domain 50 
ANK3                  0.187   ankyrin 3 isoform 1 
CASKIN1               0.171   CASK interacting protein 1 
ANKS1B                0.171   cajalin 2 isoform a 
ANKRD42               0.168   ankyrin repeat domain 42 
ANK2                  0.165   ankyrin 2 isoform 3 
ANK2                  0.165   ankyrin 2 isoform 2 
ANK2                  0.165   ankyrin 2 isoform 1 
ANKRD52               0.165   ankyrin repeat domain 52 
TNNI3K                0.165   TNNI3 interacting kinase isoform b 
TNNI3K                0.165   TNNI3 interacting kinase isoform a 
ANKRD29               0.165   ankyrin repeat domain 29 
ANKRD2                0.161   ankyrin repeat domain 2 isoform a 
ANKRD35               0.161   ankyrin repeat domain 35 
PSMD10                0.158   proteasome 26S non-ATPase subunit 10 isoform 1 
ANKRD28               0.158   ankyrin repeat domain 28 
ANK1                  0.155   ankyrin 1 isoform 9 
ANK1                  0.155   ankyrin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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