Guide to the Human Genome
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Name: ANKRD1 Sequence: fasta or formatted (319aa) NCBI GI: 38327522
Description:

cardiac ankyrin repeat protein

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         27           2
 C cysteine            1.6          5           1
 D aspartate           5.6         18           1
 E glutamate          10.7         34           2
 F phenylalanine       2.2          7           1
 G glycine             5.0         16           2
 H histidine           2.8          9           1
 I isoleucine          4.7         15           3
 K lysine             11.0         35           4
 L leucine            12.9         41           3
 M methionine          2.2          7           2
 N asparagine          4.4         14           2
 P proline             3.4         11           1
 Q glutamine           2.5          8           2
 R arginine            5.3         17           1
 S serine              3.1         10           1
 T threonine           5.0         16           1
 V valine              6.0         19           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cardiac ankyrin repeat protein 
ANKRD2                0.382   ankyrin repeat domain 2 isoform a 
ANKRD23               0.341   diabetes related ankyrin repeat protein 
ANKRD2                0.243   ankyrin repeat domain 2 isoform b 
ANKRD52               0.136   ankyrin repeat domain 52 
ANKRD28               0.123   ankyrin repeat domain 28 
DAPK1                 0.121   death-associated protein kinase 1 
ANKRD44               0.121   ankyrin repeat domain 44 
ANK1                  0.120   ankyrin 1 isoform 9 
ANK1                  0.120   ankyrin 1 isoform 1 
ANK1                  0.120   ankyrin 1 isoform 3 
ANK1                  0.120   ankyrin 1 isoform 2 
ANK1                  0.120   ankyrin 1 isoform 4 
PSMD10                0.118   proteasome 26S non-ATPase subunit 10 isoform 1 
EHMT1                 0.116   euchromatic histone-lysine N-methyltransferase 1 is...
ANKRD6                0.116   ankyrin repeat domain 6 
ANKDD1A               0.105   ankyrin repeat and death domain containing 1A 
ANK3                  0.105   ankyrin 3 isoform 1 
FANK1                 0.103   fibronectin type III and ankyrin repeat domains 1 [...
INVS                  0.102   inversin isoform a 
INVS                  0.102   inversin isoform b 
ANKRD50               0.102   ankyrin repeat domain 50 
KIDINS220             0.100   kinase D-interacting substrate of 220 kDa 
ANKRD7                0.100   ankyrin repeat domain 7 
SHANK2                0.098   SH3 and multiple ankyrin repeat domains 2 isoform 1...
ANK2                  0.098   ankyrin 2 isoform 3 
ANK2                  0.098   ankyrin 2 isoform 2 
ANK2                  0.098   ankyrin 2 isoform 1 
LOC100133890          0.097   PREDICTED: similar to Shank2E 
TNKS2                 0.097   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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