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Search of human proteins with 4502125
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502125 nudix-type motif 2 [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22219467 nudix-type motif 2 [Homo sapiens] 303 3e-83
gi|22219465 nudix-type motif 2 [Homo sapiens] 303 3e-83
gi|4502125 nudix-type motif 2 [Homo sapiens] 303 3e-83
gi|5729804 nudix-type motif 3 [Homo sapiens] 41 3e-04
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 39 0.001
gi|37221177 nudix-type motif 11 [Homo sapiens] 39 0.002
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 39 0.002
gi|41393549 nudix-type motif 10 [Homo sapiens] 38 0.003
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 35 0.017
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 35 0.023
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 35 0.023
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 34 0.038
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 31 0.33
gi|8922792 nudix-type motif 15 [Homo sapiens] 31 0.33
gi|67782311 superkiller viralicidic activity 2-like homolog [Hom... 31 0.42
gi|157785656 nudix motif 7 [Homo sapiens] 31 0.42
gi|13899267 nudix-type motif 12 [Homo sapiens] 30 0.95
gi|37594457 nudix-type motif 9 isoform b [Homo sapiens] 28 2.1
gi|13129010 nudix-type motif 9 isoform a [Homo sapiens] 28 2.1
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa... 28 2.8
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa... 28 2.8
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi... 28 2.8
gi|32469515 nudix-type motif 8 [Homo sapiens] 28 2.8
gi|55770834 centromere protein F [Homo sapiens] 28 3.6
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 27 4.7
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 27 4.7
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 27 4.7
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 27 6.1
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 27 6.1
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 27 6.1
>gi|22219467 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 303 bits (777), Expect = 3e-83
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
Sbjct: 1 MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
Query: 61 EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
Sbjct: 61 EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
Query: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
EACQLAQFKEMKAALQEGHQFLCSIEA
Sbjct: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
>gi|22219465 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 303 bits (777), Expect = 3e-83
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
Sbjct: 1 MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
Query: 61 EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
Sbjct: 61 EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
Query: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
EACQLAQFKEMKAALQEGHQFLCSIEA
Sbjct: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
>gi|4502125 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 303 bits (777), Expect = 3e-83
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
Sbjct: 1 MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
Query: 61 EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
Sbjct: 61 EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
Query: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
EACQLAQFKEMKAALQEGHQFLCSIEA
Sbjct: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F+ +
Sbjct: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87
Query: 85 RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128
K +T +Y L ++D++ + + + + W +E+A ++ Q+
Sbjct: 88 ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 39.3 bits (90), Expect = 0.001
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F++ +
Sbjct: 33 EVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFEQNQD--- 89
Query: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGHQ 140
K +T +Y L ++D++ + + + + W +E+A ++ Q K + A E +
Sbjct: 90 -RKHRTYVYVLTVTEILEDWEDSVNIGRKRE---WFKVEDAIKVLQCHKPVHAEYLEKLK 145
Query: 141 FLCS 144
CS
Sbjct: 146 LGCS 149
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F++ +
Sbjct: 32 EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88
Query: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
K +T +Y L ++D++ + + + + W +E+A ++ Q
Sbjct: 89 -RKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 38.9 bits (89), Expect = 0.002
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F+ +
Sbjct: 33 EVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQ----- 87
Query: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGHQ 140
K +T +Y L ++D++ + + + + W +E+A ++ Q K + A E +
Sbjct: 88 DRKHRTYVYVLTVTEILEDWEDSVNIGRKRE---WFKVEDAIKVLQCHKPVHAEYLEKLK 144
Query: 141 FLCS 144
CS
Sbjct: 145 LGCS 148
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F++ +
Sbjct: 32 EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88
Query: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
K +T +Y L ++D++ + + + + W +E+A ++ Q
Sbjct: 89 -PKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 35.4 bits (80), Expect = 0.017
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQ 69
W PP GHVE E+ L+ LRE EE+G+ Q
Sbjct: 122 WVPPGGHVELEEELLDGGLRELWEESGLHLPQ 153
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 20 DNNAIEFLLLQASDGIHH-WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKR 78
D + + L++Q + + + W P G EP ED +TA+RE EE GI++ +++ ++
Sbjct: 152 DESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQ 211
Query: 79 ELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEH-QAYRWLGLEE 121
N A K+ +Y + +K Y I E W+ L +
Sbjct: 212 HTNPGAFG--KSDMYIICRLKPYSFTINFCQEECLRCEWMDLND 253
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 35.0 bits (79), Expect = 0.023
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYV 83
W P G +EPGE +E RE +EEAG+ T++ +R ++V
Sbjct: 71 WYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGPSWV 116
>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
Length = 147
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAE 97
W P G EP ED +TA+RE EE GI++ +++ ++ N A K+ +Y +
Sbjct: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFG--KSDMYIICR 59
Query: 98 VKDYDVEIRLSHEH-QAYRWLGLEE 121
+K Y I E W+ L +
Sbjct: 60 LKPYSFTINFCQEECLRCEWMDLND 84
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 31.2 bits (69), Expect = 0.33
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Query: 44 HVEPGEDDLETALRETQEEAG------------IEAGQLTIIEGFKRELNYVARNKPKTV 91
HV G ET+L T + +G IE+ T++EG +LN V +P+ +
Sbjct: 2601 HVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQPQAI 2660
Query: 92 IYW 94
I W
Sbjct: 2661 ITW 2663
>gi|8922792 nudix-type motif 15 [Homo sapiens]
Length = 164
Score = 31.2 bits (69), Expect = 0.33
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 30 QASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNY---V 83
+ S G + P GH+E GE E A RET EEA + + +++ F + NY
Sbjct: 35 KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVT 94
Query: 84 ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGH 139
K + + +E K+ + E +++++ W+ EE L Q F ++ ++G+
Sbjct: 95 ILMKGEVDVTHDSEPKNVEPE-----KNESWEWVPWEELPPLDQLFWGLRCLKEQGY 146
>gi|67782311 superkiller viralicidic activity 2-like homolog [Homo
sapiens]
Length = 1246
Score = 30.8 bits (68), Expect = 0.42
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 41 PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKP 88
P G EP DL T E +EE E LTI GFK+ +++ ++ P
Sbjct: 156 PGGMDEPTITDLNTR-EEAEEEIDFEKDLLTIPPGFKKGMDFAPKDCP 202
>gi|157785656 nudix motif 7 [Homo sapiens]
Length = 238
Score = 30.8 bits (68), Expect = 0.42
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 41 PKGHVEPGE-DDLETALRETQEEAGIEAGQLTII 73
P G +P + DD TALRE QEE G+ Q+ ++
Sbjct: 74 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVV 107
>gi|13899267 nudix-type motif 12 [Homo sapiens]
Length = 462
Score = 29.6 bits (65), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 43 GHVEPGEDDLETALRETQEEAGIEAGQLTII 73
G +EPGE + RE +EE+G++ G + +
Sbjct: 355 GFIEPGETIEDAVRREVEEESGVKVGHVQYV 385
>gi|37594457 nudix-type motif 9 isoform b [Homo sapiens]
Length = 300
Score = 28.5 bits (62), Expect = 2.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 17 PKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGF 76
P + ++F+ ++ D W P G V+PGE T RE EEA + + Q T E
Sbjct: 140 PVSGKHILQFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEA-LNSLQKTSAE-- 195
Query: 77 KREL 80
KRE+
Sbjct: 196 KREI 199
>gi|13129010 nudix-type motif 9 isoform a [Homo sapiens]
Length = 350
Score = 28.5 bits (62), Expect = 2.1
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 17 PKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGF 76
P + ++F+ ++ D W P G V+PGE T RE EEA + + Q T E
Sbjct: 190 PVSGKHILQFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEA-LNSLQKTSAE-- 245
Query: 77 KREL 80
KRE+
Sbjct: 246 KREI 249
>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
sapiens]
Length = 601
Score = 28.1 bits (61), Expect = 2.8
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 15 LIPKVDNNAIEFLLLQASDGIHHWTPPK 42
L+ ++++N EFLL++A+D + W P+
Sbjct: 105 LVARIEDNDGEFLLIEAADFLPKWLDPE 132
>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
sapiens]
Length = 677
Score = 28.1 bits (61), Expect = 2.8
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 15 LIPKVDNNAIEFLLLQASDGIHHWTPPK 42
L+ ++++N EFLL++A+D + W P+
Sbjct: 105 LVARIEDNDGEFLLIEAADFLPKWLDPE 132
>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
sapiens]
Length = 644
Score = 28.1 bits (61), Expect = 2.8
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 15 LIPKVDNNAIEFLLLQASDGIHHWTPPK 42
L+ ++++N EFLL++A+D + W P+
Sbjct: 105 LVARIEDNDGEFLLIEAADFLPKWLDPE 132
>gi|32469515 nudix-type motif 8 [Homo sapiens]
Length = 140
Score = 28.1 bits (61), Expect = 2.8
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 41 PKGHVEPGEDDL-ETALRETQEEAGI 65
P G +P + D+ TALRET+EE G+
Sbjct: 67 PGGKCDPADQDVVHTALRETREELGL 92
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 27.7 bits (60), Expect = 3.6
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 27 LLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEA 67
+L Q + HH KG VE E +LE A R QE A +EA
Sbjct: 2320 VLQQLKESEHHADLLKGRVENLERELEIA-RTNQEHAALEA 2359
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform
4 [Homo sapiens]
Length = 3321
Score = 27.3 bits (59), Expect = 4.7
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 59 TQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLG 118
T++EA AG+L ++G EL +K + E ++ DV++ + WL
Sbjct: 682 TKDEAEQLAGKLRRLKGSLLELQRALHDKQLNMQGTAQEKEESDVDLTATQSPGVQEWLA 741
Query: 119 -------LEEACQLAQFKEMKAALQEGHQFLCSI 145
+ L Q KE++ L E L S+
Sbjct: 742 QARTTWTQQRQSSLQQQKELEQELAEQKSLLRSV 775
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 27.3 bits (59), Expect = 4.7
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 59 TQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLG 118
T++EA AG+L ++G EL +K + E ++ DV++ + WL
Sbjct: 6087 TKDEAEQLAGKLRRLKGSLLELQRALHDKQLNMQGTAQEKEESDVDLTATQSPGVQEWLA 6146
Query: 119 -------LEEACQLAQFKEMKAALQEGHQFLCSI 145
+ L Q KE++ L E L S+
Sbjct: 6147 QARTTWTQQRQSSLQQQKELEQELAEQKSLLRSV 6180
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 27.3 bits (59), Expect = 4.7
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 59 TQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLG 118
T++EA AG+L ++G EL +K + E ++ DV++ + WL
Sbjct: 6158 TKDEAEQLAGKLRRLKGSLLELQRALHDKQLNMQGTAQEKEESDVDLTATQSPGVQEWLA 6217
Query: 119 -------LEEACQLAQFKEMKAALQEGHQFLCSI 145
+ L Q KE++ L E L S+
Sbjct: 6218 QARTTWTQQRQSSLQQQKELEQELAEQKSLLRSV 6251
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 26.9 bits (58), Expect = 6.1
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 41 PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKD 100
P+G + D+ A E +EE G EA +L VAR P + I+++
Sbjct: 76 PRGGSAEEDSDIGPATEEEEEEEGNEAANF--------DLAVVARRYPASGIHFVLLDMV 127
Query: 101 YDVEIRLSH 109
+ + RLSH
Sbjct: 128 HSLLHRLSH 136
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 26.9 bits (58), Expect = 6.1
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 41 PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKD 100
P+G + D+ A E +EE G EA +L VAR P + I+++
Sbjct: 76 PRGGSAEEDSDIGPATEEEEEEEGNEAANF--------DLAVVARRYPASGIHFVLLDMV 127
Query: 101 YDVEIRLSH 109
+ + RLSH
Sbjct: 128 HSLLHRLSH 136
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 26.9 bits (58), Expect = 6.1
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 41 PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKD 100
P+G + D+ A E +EE G EA +L VAR P + I+++
Sbjct: 76 PRGGSAEEDSDIGPATEEEEEEEGNEAANF--------DLAVVARRYPASGIHFVLLDMV 127
Query: 101 YDVEIRLSH 109
+ + RLSH
Sbjct: 128 HSLLHRLSH 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,697,761
Number of Sequences: 37866
Number of extensions: 229407
Number of successful extensions: 711
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 691
Number of HSP's gapped (non-prelim): 46
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.