SKIV2L 34734

Name: SKIV2L	Sequence: fasta or formatted (1246aa)		NCBI GI: 67782311
Description: superkiller viralicidic activity 2-like homolog		Referenced in: DEAD / H Helicase Family RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 97 2 C cysteine 1.4 17 1 D aspartate 5.0 62 2 E glutamate 7.4 92 3 F phenylalanine 3.4 42 1 G glycine 7.0 87 3 H histidine 2.5 31 2 I isoleucine 3.1 39 2 K lysine 3.9 49 2 L leucine 13.2 164 4 M methionine 2.8 35 3 N asparagine 1.9 24 1 P proline 7.0 87 3 Q glutamine 5.0 62 2 R arginine 6.3 79 2 S serine 6.5 81 2 T threonine 5.8 72 2 V valine 7.3 91 4 W tryptophan 1.0 13 1 Y tyrosine 1.8 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 superkiller viralicidic activity 2-like homolog [Hom... SKIV2L2 0.223 superkiller viralicidic activity 2-like 2 HFM1 0.036 HFM1 protein SNRNP200 0.035 activating signal cointegrator 1 complex subunit 3-l... LOC652147 0.033 PREDICTED: similar to U5 snRNP-specific 200kD prote... ASCC3 0.032 activating signal cointegrator 1 complex subunit 3 i... POLQ 0.026 DNA polymerase theta DDX60L 0.026 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Hom... DDX60 0.022 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 HELQ 0.016 DNA helicase HEL308 DDX54 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... DDX54 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1... TACC2 0.006 transforming, acidic coiled-coil containing protein... C6orf132 0.005 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.005 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.005 PREDICTED: hypothetical protein LOC647024 MUC16 0.005 mucin 16 RECQL 0.005 RecQ protein-like RECQL 0.005 RecQ protein-like QRICH1 0.005 glutamine-rich 1 QRICH1 0.005 glutamine-rich 1 APC2 0.004 adenomatosis polyposis coli 2 WRN 0.004 Werner syndrome protein LOC652522 0.004 PREDICTED: similar to Werner syndrome ATP-dependent... RECQL4 0.004 RecQ protein-like 4 SUPV3L1 0.004 suppressor of var1, 3-like 1 ZSCAN20 0.004 zinc finger protein 31 DDX10 0.004 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 DDX50 0.004 nucleolar protein GU2 TACC2 0.004 transforming, acidic coiled-coil containing protein ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.