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Search of human proteins with 4501869
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens]
(681 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens] 1374 0.0
gi|30089974 acyl-Coenzyme A oxidase 1 isoform b [Homo sapiens] 553 e-157
gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens] 545 e-155
gi|156104864 acyl-Coenzyme A oxidase 3 isoform a [Homo sapiens] 258 2e-68
gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens] 231 1e-60
gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens] 163 4e-40
gi|218563752 acyl-Coenzyme A oxidase-like 1 [Homo sapiens] 148 1e-35
gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens] 147 4e-35
gi|4557233 short-chain acyl-CoA dehydrogenase precursor [Homo sa... 39 0.016
gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor... 39 0.016
gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor... 39 0.016
gi|21361497 acyl-Coenzyme A dehydrogenase family, member 9 [Homo... 39 0.021
gi|4557235 acyl-Coenzyme A dehydrogenase, very long chain isofor... 37 0.060
gi|76496475 acyl-Coenzyme A dehydrogenase, very long chain isofo... 37 0.060
gi|4501857 long-chain acyl-CoA dehydrogenase precursor [Homo sap... 35 0.23
gi|187960098 medium-chain acyl-CoA dehydrogenase isoform b precu... 35 0.30
gi|4557231 medium-chain acyl-CoA dehydrogenase isoform a precurs... 35 0.30
gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain p... 34 0.39
gi|5730095 tumor necrosis factor receptor superfamily, member 9 ... 32 2.5
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap... 32 2.5
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap... 32 2.5
gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo ... 31 4.3
gi|4503011 carboxypeptidase N, polypeptide 1 precursor [Homo sap... 30 7.4
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens] 30 7.4
gi|7706757 H(+)-transporting two-sector ATPase [Homo sapiens] 30 9.6
>gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens]
Length = 681
Score = 1374 bits (3556), Expect = 0.0
Identities = 681/681 (100%), Positives = 681/681 (100%)
Query: 1 MGSPVHRVSLGDTWSRQMHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSY 60
MGSPVHRVSLGDTWSRQMHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSY
Sbjct: 1 MGSPVHRVSLGDTWSRQMHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSY 60
Query: 61 PEFSCKDNYFMTQNERYKAAMRRAFHIRLIARRLGWLEDGRELGYAYRALSGDVALNIHR 120
PEFSCKDNYFMTQNERYKAAMRRAFHIRLIARRLGWLEDGRELGYAYRALSGDVALNIHR
Sbjct: 61 PEFSCKDNYFMTQNERYKAAMRRAFHIRLIARRLGWLEDGRELGYAYRALSGDVALNIHR 120
Query: 121 VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVI 180
VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVI
Sbjct: 121 VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVI 180
Query: 181 HSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGD 240
HSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGD
Sbjct: 181 HSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGD 240
Query: 241 IGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVEL 300
IGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVEL
Sbjct: 241 IGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVEL 300
Query: 301 LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFL 360
LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFL
Sbjct: 301 LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFL 360
Query: 361 AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKL 420
AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKL
Sbjct: 361 AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKL 420
Query: 421 SGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAP 480
SGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAP
Sbjct: 421 SGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAP 480
Query: 481 DLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHL 540
DLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHL
Sbjct: 481 DLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHL 540
Query: 541 QAAKVHCYYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGA 600
QAAKVHCYYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGA
Sbjct: 541 QAAKVHCYYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGA 600
Query: 601 QVDMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNT 660
QVDMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNT
Sbjct: 601 QVDMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNT 660
Query: 661 QENPAYEEYIRPLLQSWRSKL 681
QENPAYEEYIRPLLQSWRSKL
Sbjct: 661 QENPAYEEYIRPLLQSWRSKL 681
>gi|30089974 acyl-Coenzyme A oxidase 1 isoform b [Homo sapiens]
Length = 660
Score = 553 bits (1425), Expect = e-157
Identities = 306/673 (45%), Positives = 422/673 (62%), Gaps = 22/673 (3%)
Query: 18 MHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSYPEFSCKDNYFMTQNERY 77
M+PD+ ER SF+ E LT+ILDG + T RR++E++I + P+F +D F+T+++RY
Sbjct: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
Query: 78 KAAMRRAFHIRLIARRLGWLEDGRELGYAYRALSG---DVALNIHRVFVRALRSLGSEEQ 134
+ A+R++ + R G + + + L V LN + +F+ L + G+ Q
Sbjct: 61 EVAVRKSAIMVKKMREFGIADPDEIMWFKKLHLVNFVEPVGLN-YSMFIPTLLNQGTTAQ 119
Query: 135 IAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPGD 194
KW K +QII TYAQTE+GHGT+L+GLET ATYD TQEF+++SPT+T+ KWWPG
Sbjct: 120 KEKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGG 179
Query: 195 LGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKMDFDQTDNGF 254
LG+++ HA+V AQLI G G+HAFIVPIR + H PLPGI +GDIGPK +D+ DNG+
Sbjct: 180 LGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNGY 239
Query: 255 LQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLSGEILPILQKACV 314
L++++ R+PRENML ++AQV PDGTYVK + + Y MV VR L GE L KAC
Sbjct: 240 LKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVR-SFLVGEAARALSKACT 298
Query: 315 IAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAVSLLEFFQHSYTA 374
IA+RYS +R QS ++P +PE ++LD+QTQQ KLFP LA +YAF F+ + E +
Sbjct: 299 IAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINEG 358
Query: 375 ILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPSLVTKLSASC 434
I D S LPELHAL+ G+KA S G E CR ACGGHGYS SGLP++ + SC
Sbjct: 359 IGQGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPSC 418
Query: 435 TYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLARCPAQRAA--- 491
T+EGENTV+ LQ ARFL+KSY Q + + V+YL R Q+ A
Sbjct: 419 TFEGENTVMMLQTARFLMKSYDQVHSG------KLVCGMVSYLNDLPSQRIQPQQVAVWP 472
Query: 492 ---DFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHLQAAKVHCY 548
D PE T A+ A RL++ + ++LQ + AWN T+V ++A++ HC+
Sbjct: 473 TMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCH 532
Query: 549 YVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGAQVDMARTA 608
YV VK F+E L K++++ AIQ VL+ LC L++++GI N+GDFL + ++ Q+
Sbjct: 533 YVVVKLFSEKLLKIQDK-AIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQR 591
Query: 609 YLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNTQENPAYEE 668
+LL LIR DA+ L DAFDF D L S LG YDGNVYE LF+WA+ SP N E +E
Sbjct: 592 VKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAE--VHES 649
Query: 669 YIRPLLQSWRSKL 681
Y L+S +SKL
Sbjct: 650 YKH--LKSLQSKL 660
>gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens]
Length = 660
Score = 545 bits (1405), Expect = e-155
Identities = 303/674 (44%), Positives = 422/674 (62%), Gaps = 24/674 (3%)
Query: 18 MHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSYPEFSCKDNYFMTQNERY 77
M+PD+ ER SF+ E LT+ILDG + T RR++E++I + P+F +D F+T+++RY
Sbjct: 1 MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDPDFQHEDLNFLTRSQRY 60
Query: 78 KAAMRRAFHIRLIARRLGWLEDGREL----GYAYRALSGDVALNIHRVFVRALRSLGSEE 133
+ A+R++ + R G + D E+ + +R + L++ L +E+
Sbjct: 61 EVAVRKSAIMVKKMREFG-IADPDEIMWFKNFVHRGRPEPLDLHLGMFLPTLLHQATAEQ 119
Query: 134 QIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPG 193
Q + P N++II TYAQTE+GHGT+L+GLET ATYD TQEF+++SPT+T+ KWWPG
Sbjct: 120 QERFFMPAW-NLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPG 178
Query: 194 DLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKMDFDQTDNG 253
LG+++ HA+V AQLI G G+HAFIVPIR + H PLPGI +GDIGPK +D+ DNG
Sbjct: 179 GLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDIGPKFGYDEIDNG 238
Query: 254 FLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLSGEILPILQKAC 313
+L++++ R+PRENML ++AQV PDGTYVK + + Y MV VR L GE L KAC
Sbjct: 239 YLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVR-SFLVGEAARALSKAC 297
Query: 314 VIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAVSLLEFFQHSYT 373
IA+RYS +R QS ++P +PE ++LD+QTQQ KLFP LA +YAF F+ + E +
Sbjct: 298 TIAIRYSAVRHQSEIKPGEPEPQILDFQTQQYKLFPLLATAYAFQFVGAYMKETYHRINE 357
Query: 374 AILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPSLVTKLSAS 433
I D S LPELHAL+ G+KA S G E CR ACGGHGYS SGLP++ + S
Sbjct: 358 GIGQGDLSELPELHALTAGLKAFTSWTANTGIEACRMACGGHGYSHCSGLPNIYVNFTPS 417
Query: 434 CTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLARCPAQRAA-- 491
CT+EGENTV+ LQ ARFL+KSY Q + + V+YL R Q+ A
Sbjct: 418 CTFEGENTVMMLQTARFLMKSYDQVHSG------KLVCGMVSYLNDLPSQRIQPQQVAVW 471
Query: 492 ----DFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHLQAAKVHC 547
D PE T A+ A RL++ + ++LQ + AWN T+V ++A++ HC
Sbjct: 472 PTMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHC 531
Query: 548 YYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGAQVDMART 607
+YV VK F+E L K++++ AIQ VL+ LC L++++GI N+GDFL + ++ Q+
Sbjct: 532 HYVVVKLFSEKLLKIQDK-AIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQ 590
Query: 608 AYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNTQENPAYE 667
+LL LIR DA+ L DAFDF D L S LG YDGNVYE LF+WA+ SP N E +E
Sbjct: 591 RVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAE--VHE 648
Query: 668 EYIRPLLQSWRSKL 681
Y L+S +SKL
Sbjct: 649 SYKH--LKSLQSKL 660
>gi|156104864 acyl-Coenzyme A oxidase 3 isoform a [Homo sapiens]
Length = 700
Score = 258 bits (658), Expect = 2e-68
Identities = 189/586 (32%), Positives = 298/586 (50%), Gaps = 37/586 (6%)
Query: 121 VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVI 180
VF A+ S GSE + + + ++I +A TEL HG+ + + T A YD AT+EF+I
Sbjct: 127 VFGSAVYSSGSERHLTYIQKIFR-MEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFII 185
Query: 181 HSPTLTATKWWPGDLGRSATHALVQAQLICSGAR-RGMHAFIVPIRSLQDHTPLPGIIIG 239
HSP A K+W G++G++ATHA+V A+L G + G+H FIV IR + P+PG+++G
Sbjct: 186 HSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVG 245
Query: 240 DIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYV------------KLGTAQ 287
DIG K+ + DNGF + VRVPR+++L+R V P+GTYV LG+
Sbjct: 246 DIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLS 305
Query: 288 SNYLPMVVVRVELLSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKL 347
S RV ++S IL L+ A IA+R+S RRQ + E VL+Y QQ +L
Sbjct: 306 SG-------RVSIVSLAILN-LKLAVAIALRFSATRRQFG-PTEEEEIPVLEYPMQQWRL 356
Query: 348 FPQLAISYAFHFLAVSLLEFFQHSYTAILNQDFSFLP-----ELHALSTGMKAMMSEFCT 402
P LA YA + SL + + D S E+HAL++ K + S
Sbjct: 357 LPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELGREIHALASASKPLASWTTQ 416
Query: 403 QGAEMCRRACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSP 462
QG + CR ACGGHGY ++ L L +CTYEG+N +L Q + +L+ L Q+
Sbjct: 417 QGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNILLQQTSNYLL-GLLAHQVHD 475
Query: 463 GS---TPQRSLSPSVAYLTAPDLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQ 519
G+ +P +S+ AY D + AD L + A+ + L++++ Q L
Sbjct: 476 GACFRSPLKSVDFLDAYPGILD-QKFEVSSVADCLDSAVALAAYKWLVCYLLRETYQKLN 534
Query: 520 TLTQSGADQHEAWNQTTVIHLQAAKVHCYYVT-VKGFTEALEKLENEPAIQQVLKRLCDL 578
+SG+ EA N+ V H + + +T V+ F E + + P+++ VL RL L
Sbjct: 535 QEKRSGSSDFEARNKCQVSHGRPLALAFVELTVVQRFHEHVHQPSVPPSLRAVLGRLSAL 594
Query: 579 HAIHGILTNSGDFLHDAFLSGAQV-DMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSA 637
+A+ + ++ + SG Q ++ +A L L ++ DA+ L D D L+S
Sbjct: 595 YALWSLSRHAALLYRGGYFSGEQAGEVLESAVLALCSQLKDDAVALVDVIAPPDFVLDSP 654
Query: 638 LGCYDGNVYERLFQWAQKSPTNTQENPAYEEYI--RPLLQSWRSKL 681
+G DG +Y+ L+ + + + E+ +P++ S +SKL
Sbjct: 655 IGRADGELYKNLWGAVLQESKVLERASWWPEFSVNKPVIGSLKSKL 700
>gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens]
Length = 624
Score = 231 bits (590), Expect = 1e-60
Identities = 165/483 (34%), Positives = 251/483 (51%), Gaps = 34/483 (7%)
Query: 121 VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVI 180
VF A+ S GSE + + + ++I +A TEL HG+ + + T A YD AT+EF+I
Sbjct: 127 VFGSAVYSSGSERHLTYIQKIFR-MEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFII 185
Query: 181 HSPTLTATKWWPGDLGRSATHALVQAQLICSGAR-RGMHAFIVPIRSLQDHTPLPGIIIG 239
HSP A K+W G++G++ATHA+V A+L G + G+H FIV IR + P+PG+++G
Sbjct: 186 HSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVG 245
Query: 240 DIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYV------------KLGTAQ 287
DIG K+ + DNGF + VRVPR+++L+R V P+GTYV LG+
Sbjct: 246 DIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLS 305
Query: 288 SNYLPMVVVRVELLSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKL 347
S RV ++S IL L+ A IA+R+S RRQ + E VL+Y QQ +L
Sbjct: 306 SG-------RVSIVSLAILN-LKLAVAIALRFSATRRQFG-PTEEEEIPVLEYPMQQWRL 356
Query: 348 FPQLAISYAFHFLAVSLLEFFQHSYTAILNQDFSFLP-----ELHALSTGMKAMMSEFCT 402
P LA YA + SL + + D S E+HAL++ K + S
Sbjct: 357 LPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELGREIHALASASKPLASWTTQ 416
Query: 403 QGAEMCRRACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSP 462
QG + CR ACGGHGY ++ L L +CTYEG+N +L Q + +L+ L Q+
Sbjct: 417 QGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNILLQQTSNYLL-GLLAHQVHD 475
Query: 463 GS---TPQRSLSPSVAYLTAPDLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQ 519
G+ +P +S+ AY D + AD L + A+ + L++++ Q L
Sbjct: 476 GACFRSPLKSVDFLDAYPGILD-QKFEVSSVADCLDSAVALAAYKWLVCYLLRETYQKLN 534
Query: 520 TLTQSGADQHEAWNQTTVIHLQAAKVHCYYVT-VKGFTEALEKLENEPAIQQVLKRLCDL 578
+SG+ EA N+ V H + + +T V+ F E + + P+++ VL RL L
Sbjct: 535 QEKRSGSSDFEARNKCQVSHGRPLALAFVELTVVQRFHEHVHQPSVPPSLRAVLGRLSAL 594
Query: 579 HAI 581
+A+
Sbjct: 595 YAL 597
>gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens]
Length = 547
Score = 163 bits (413), Expect = 4e-40
Identities = 113/345 (32%), Positives = 179/345 (51%), Gaps = 15/345 (4%)
Query: 118 IHRVFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQE 177
I+ +F A+R+LGS E + KW + + +A TE GHG+ +G++TEAT+D + QE
Sbjct: 57 IYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQE 116
Query: 178 FVIHSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGII 237
FVI +P A K + G+ +A V AQLI G +G H FIVP+R ++ + PG+
Sbjct: 117 FVIDTPCENAEKMYIGN-AMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD-ENGSLYPGVT 174
Query: 238 IGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTY---VKLGTAQSNYLPMV 294
D+ K DNG L + VR+PREN+L +F V PDG Y ++ +A+ N +
Sbjct: 175 AIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAA 234
Query: 295 VVRVEL-LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAI 353
+ L ++ + + ++ IA+RYS RRQ + + E K++++QTQ +L P LA
Sbjct: 235 LTPSRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPKTKE-EVKIIEHQTQTLRLMPHLAT 293
Query: 354 SYAFHFL---AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRR 410
+ A F+ A +LL+ ++N L AL G+KA + + + CR
Sbjct: 294 ALALTFVSRYAGALLDEDVFQGKELVNS-----RSLQALVAGLKAYSTWENIRCLQDCRE 348
Query: 411 ACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSY 455
GG GY + + L T+EG++ V+ V R L+ Y
Sbjct: 349 CTGGMGYMMENRISGLKCDTDVFATFEGDDVVMLQVVGRELLAQY 393
>gi|218563752 acyl-Coenzyme A oxidase-like 1 [Homo sapiens]
Length = 580
Score = 148 bits (374), Expect = 1e-35
Identities = 141/528 (26%), Positives = 233/528 (44%), Gaps = 47/528 (8%)
Query: 118 IHRVFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQE 177
I+ +F A+R+LGS E + KW + + +A TE GHG+ +G++TEAT+D + QE
Sbjct: 57 IYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQE 116
Query: 178 FVIHSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGII 237
FVI +P A K + G+ +A V AQLI G +G H FIVP+R ++ + PG+
Sbjct: 117 FVIDTPCENAEKMYIGN-AMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD-ENGSLYPGVT 174
Query: 238 IGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTY---VKLGTAQSNYLPMV 294
D+ K DNG L + VR+PREN+L +F V PDG Y ++ +A+ N +
Sbjct: 175 AIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAA 234
Query: 295 VVRVEL-LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAI 353
+ L ++ + + ++ IA+RYS RRQ + + E K++++QTQ +L P LA
Sbjct: 235 LTPSRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPKTKE-EVKIIEHQTQTLRLMPHLAT 293
Query: 354 SYAFHFL---AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRR 410
+ A F+ A +LL+ ++N L AL G+KA + + + CR
Sbjct: 294 ALALTFVSRYAGALLDEDVFQGKELVNS-----RSLQALVAGLKAYSTWENIRCLQDCRE 348
Query: 411 ACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSL 470
GG + +L A T + E L+ LQ R+
Sbjct: 349 CTGGMVVGR---------ELLAQYTKQYEEKPLF---------GLLQNWAESVGDKLRTS 390
Query: 471 SPSVAYLTAPDLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHE 530
+ T DLA +A F L A + + + D
Sbjct: 391 FLAFNMDTVDDLAF--LLKAVKFRERVLQRGLVARIYYK-----------VKTKKEDFFH 437
Query: 531 AWNQTTVIHLQAAKVHCYYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGD 590
AWN + H + VT++ F+ A++ ++ Q +L + C L+ +
Sbjct: 438 AWNSCLHHVASLSLAHTHRVTLEQFSLAVKSCPDQED-QTLLMKFCLLYGTKLVFQERAW 496
Query: 591 FLHDAFLSGAQVDMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSAL 638
+L +L+ R LDL ++ DA + F+ L++ +
Sbjct: 497 YLEHKYLTPMASTRIRNQLLDLCDSVKDDARRVISTFNIPHTYLHAPI 544
>gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens]
Length = 517
Score = 147 bits (370), Expect = 4e-35
Identities = 102/304 (33%), Positives = 161/304 (52%), Gaps = 15/304 (4%)
Query: 118 IHRVFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQE 177
I+ +F A+R+LGS E + KW + + +A TE GHG+ +G++TEAT+D + QE
Sbjct: 57 IYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQE 116
Query: 178 FVIHSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGII 237
FVI +P A K + G+ +A V AQLI G +G H FIVP+R ++ + PG+
Sbjct: 117 FVIDTPCENAEKMYIGN-AMYGNYAAVFAQLIIDGRSQGPHCFIVPVRD-ENGSLYPGVT 174
Query: 238 IGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTY---VKLGTAQSNYLPMV 294
D+ K DNG L + VR+PREN+L +F V PDG Y ++ +A+ N +
Sbjct: 175 AIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGSVAPDGQYHSPIRNKSARFNAMLAA 234
Query: 295 VVRVEL-LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAI 353
+ L ++ + + ++ IA+RYS RRQ + + E K++++QTQ +L P LA
Sbjct: 235 LTPSRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPKTKE-EVKIIEHQTQTLRLMPHLAT 293
Query: 354 SYAFHFL---AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRR 410
+ A F+ A +LL+ ++N L AL G+KA + + + CR
Sbjct: 294 ALALTFVSRYAGALLDEDVFQGKELVNS-----RSLQALVAGLKAYSTWENIRCLQDCRE 348
Query: 411 ACGG 414
GG
Sbjct: 349 CTGG 352
>gi|4557233 short-chain acyl-CoA dehydrogenase precursor [Homo
sapiens]
Length = 412
Score = 38.9 bits (89), Expect = 0.016
Identities = 73/337 (21%), Positives = 130/337 (38%), Gaps = 50/337 (14%)
Query: 121 VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVI 180
+++ + GS+EQ W + I +A +E G+G+ T A A +V+
Sbjct: 122 LYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTAR--AEGDSWVL 179
Query: 181 HSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGD 240
+ T W A+ A+V A + +G+ AF+VP+ P PG+ +G
Sbjct: 180 NGTKAWITNAW------EASAAVVFASTDRALQNKGISAFLVPM-------PTPGLTLGK 226
Query: 241 IGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVEL 300
K+ + L R+P++++L G + + T +
Sbjct: 227 KEDKLGIRGSSTANLIFEDCRIPKDSILGEPGM----GFKIAMQTLDMGRIG-------- 274
Query: 301 LSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFL 360
++ + L I Q A A+ Y+ ++R+ P K+ Q Q KL A L
Sbjct: 275 IASQALGIAQTALDCAVNYA----ENRMAFGAPLTKL---QVIQFKL--------ADMAL 319
Query: 361 AVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKL 420
A+ + + F+ E + K SE T + + GG GY +
Sbjct: 320 ALESARLLTWRAAMLKDNKKPFIKE----AAMAKLAASEAATAISHQAIQILGGMGY--V 373
Query: 421 SGLPSLVTKLSASCT--YEGENTVLYLQVARFLVKSY 455
+ +P+ A T YEG + + L +A L++SY
Sbjct: 374 TEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSY 410
>gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor
[Homo sapiens]
Length = 438
Score = 38.9 bits (89), Expect = 0.016
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 29/181 (16%)
Query: 89 LIARRLGWLEDGRELGYAYR-ALSGDVALNIHRVFVRALRSLGSEEQIAKWDPLCKNIQI 147
L+AR L ++ G YR A+S +L +H ++ + GSEEQ K+ P ++
Sbjct: 125 LLARELERVDSG------YRSAMSVQSSLVMHPIY-----AYGSEEQRQKYLPQLAKGEL 173
Query: 148 IATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQ 207
+ + TE G+ +ET A Y+++ + + TL TK W + S L
Sbjct: 174 LGCFGLTEPNSGSDPSSMETRAHYNSSNKSY-----TLNGTKTW---ITNSPMADLFVVW 225
Query: 208 LICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKMDFDQTDNGFLQLNHVRVPRENM 267
C IR + G+ I K + G + ++ V VP EN+
Sbjct: 226 ARCEDG---------CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENV 276
Query: 268 L 268
L
Sbjct: 277 L 277
>gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor
[Homo sapiens]
Length = 428
Score = 38.9 bits (89), Expect = 0.016
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 29/181 (16%)
Query: 89 LIARRLGWLEDGRELGYAYR-ALSGDVALNIHRVFVRALRSLGSEEQIAKWDPLCKNIQI 147
L+AR L ++ G YR A+S +L +H ++ + GSEEQ K+ P ++
Sbjct: 125 LLARELERVDSG------YRSAMSVQSSLVMHPIY-----AYGSEEQRQKYLPQLAKGEL 173
Query: 148 IATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQ 207
+ + TE G+ +ET A Y+++ + + TL TK W + S L
Sbjct: 174 LGCFGLTEPNSGSDPSSMETRAHYNSSNKSY-----TLNGTKTW---ITNSPMADLFVVW 225
Query: 208 LICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKMDFDQTDNGFLQLNHVRVPRENM 267
C IR + G+ I K + G + ++ V VP EN+
Sbjct: 226 ARCEDG---------CIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENV 276
Query: 268 L 268
L
Sbjct: 277 L 277
>gi|21361497 acyl-Coenzyme A dehydrogenase family, member 9 [Homo
sapiens]
Length = 621
Score = 38.5 bits (88), Expect = 0.021
Identities = 65/338 (19%), Positives = 126/338 (37%), Gaps = 43/338 (12%)
Query: 114 VALNIHRVF-VRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYD 172
V L H+ ++ + G+EEQ AK+ P + + IA + TE G+ + + AT
Sbjct: 140 VTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLS 199
Query: 173 AATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQLICS--GARRGMHAFIVPIRSLQDH 230
+ ++++ + T G L T + +++ S + + AFIV
Sbjct: 200 EDKKHYILNGSKVWITN---GGLANIFT-VFAKTEVVDSDGSVKDKITAFIV-------E 248
Query: 231 TPLPGIIIGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNY 290
G+ G K+ ++ + + ++P EN+L + DG V + S
Sbjct: 249 RDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPVENILGE----VGDGFKVAMNILNSGR 304
Query: 291 LPMVVVRVELLSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQ 350
M V + +L++ + Y+ R+Q R S+ + QK +
Sbjct: 305 FSMGSV--------VAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVM 356
Query: 351 LAISYAFHFLAVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRR 410
+++Y L +L D P+ + +K SE Q +
Sbjct: 357 ESMTY----LTAGML-------------DQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQ 399
Query: 411 ACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVA 448
GG GY++ ++ +EG N +L + +A
Sbjct: 400 ILGGLGYTRDYPYERILRDTRILLIFEGTNEILRMYIA 437
>gi|4557235 acyl-Coenzyme A dehydrogenase, very long chain isoform 1
precursor [Homo sapiens]
Length = 655
Score = 37.0 bits (84), Expect = 0.060
Identities = 70/340 (20%), Positives = 129/340 (37%), Gaps = 47/340 (13%)
Query: 114 VALNIHR-VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYD 172
+ L H+ + + + G++ Q K+ P + + +A + TE G+ + T A
Sbjct: 176 ITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPS 235
Query: 173 AATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQLICSGA----RRGMHAFIVPIRSLQ 228
+ + TL +K W + G + + + A + + AF+V
Sbjct: 236 PCGKYY-----TLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVV------ 284
Query: 229 DHTPLPGIIIGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQS 288
GI G KM ++ + + VRVP EN+L G V + +
Sbjct: 285 -ERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGS----GFKVAMHILNN 339
Query: 289 NYLPMVVVRVELLSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLF 348
M L+G + I+ KA V +R + + K+ ++ Q+KL
Sbjct: 340 GRFGMAAA----LAGTMRGIIAKA--------VDHATNRTQFGE---KIHNFGLIQEKLA 384
Query: 349 PQLAISYAFHFLAVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMC 408
+ + Y +A + +A ++Q + A+S K SE + + C
Sbjct: 385 RMVMLQYVTESMA--------YMVSANMDQGATDFQIEAAIS---KIFGSEAAWKVTDEC 433
Query: 409 RRACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVA 448
+ GG G+ K G+ ++ L +EG N +L L VA
Sbjct: 434 IQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVA 473
>gi|76496475 acyl-Coenzyme A dehydrogenase, very long chain isoform
2 precursor [Homo sapiens]
Length = 633
Score = 37.0 bits (84), Expect = 0.060
Identities = 70/340 (20%), Positives = 129/340 (37%), Gaps = 47/340 (13%)
Query: 114 VALNIHR-VFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYD 172
+ L H+ + + + G++ Q K+ P + + +A + TE G+ + T A
Sbjct: 154 ITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPS 213
Query: 173 AATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQLICSGA----RRGMHAFIVPIRSLQ 228
+ + TL +K W + G + + + A + + AF+V
Sbjct: 214 PCGKYY-----TLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVV------ 262
Query: 229 DHTPLPGIIIGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQS 288
GI G KM ++ + + VRVP EN+L G V + +
Sbjct: 263 -ERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGS----GFKVAMHILNN 317
Query: 289 NYLPMVVVRVELLSGEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLF 348
M L+G + I+ KA V +R + + K+ ++ Q+KL
Sbjct: 318 GRFGMAAA----LAGTMRGIIAKA--------VDHATNRTQFGE---KIHNFGLIQEKLA 362
Query: 349 PQLAISYAFHFLAVSLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMC 408
+ + Y +A + +A ++Q + A+S K SE + + C
Sbjct: 363 RMVMLQYVTESMA--------YMVSANMDQGATDFQIEAAIS---KIFGSEAAWKVTDEC 411
Query: 409 RRACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVA 448
+ GG G+ K G+ ++ L +EG N +L L VA
Sbjct: 412 IQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVA 451
>gi|4501857 long-chain acyl-CoA dehydrogenase precursor [Homo
sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 0.23
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 106 AYRALSGDVALNIHRVFVRA-LRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQG 164
AY SG +IH V + + + GSEEQI + P + I A TE G G+ LQG
Sbjct: 125 AYSNCSGP-GFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQG 183
Query: 165 LETEATYDAA 174
++T A D +
Sbjct: 184 IKTNAKKDGS 193
>gi|187960098 medium-chain acyl-CoA dehydrogenase isoform b
precursor [Homo sapiens]
Length = 425
Score = 34.7 bits (78), Expect = 0.30
Identities = 73/330 (22%), Positives = 124/330 (37%), Gaps = 51/330 (15%)
Query: 130 GSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATK 189
G+++Q K+ ++ Y TE G G+ + G++T+A + E++I+ + T
Sbjct: 141 GNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKA--EKKGDEYIINGQKMWITN 198
Query: 190 W----WPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKM 245
W L RS A +G FIV PGI IG M
Sbjct: 199 GGKANWYFLLARSDPDPKAPANKAFTG-------FIV-------EADTPGIQIGRKELNM 244
Query: 246 DFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLSGEI 305
+D + V+VP+EN+L + DG K+ + VV +
Sbjct: 245 GQRCSDTRGIVFEDVKVPKENVL------IGDGAGFKVAMGAFDKTRPVV------AAGA 292
Query: 306 LPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAVSLL 365
+ + Q+A A +Y++ R+ T + L AIS+ +A+ +
Sbjct: 293 VGLAQRALDEATKYALERK-----------------TFGKLLVEHQAISFMLAEMAMKV- 334
Query: 366 EFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPS 425
E + SY + S + S KA + Q A + GG+G++ +
Sbjct: 335 ELARMSYQRAAWEVDSGRRNTYYASIA-KAFAGDIANQLATDAVQILGGNGFNTEYPVEK 393
Query: 426 LVTKLSASCTYEGENTVLYLQVARFLVKSY 455
L+ YEG + + L VAR + Y
Sbjct: 394 LMRDAKIYQIYEGTSQIQRLIVAREHIDKY 423
>gi|4557231 medium-chain acyl-CoA dehydrogenase isoform a precursor
[Homo sapiens]
Length = 421
Score = 34.7 bits (78), Expect = 0.30
Identities = 73/330 (22%), Positives = 124/330 (37%), Gaps = 51/330 (15%)
Query: 130 GSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATK 189
G+++Q K+ ++ Y TE G G+ + G++T+A + E++I+ + T
Sbjct: 137 GNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKA--EKKGDEYIINGQKMWITN 194
Query: 190 W----WPGDLGRSATHALVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIGPKM 245
W L RS A +G FIV PGI IG M
Sbjct: 195 GGKANWYFLLARSDPDPKAPANKAFTG-------FIV-------EADTPGIQIGRKELNM 240
Query: 246 DFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLSGEI 305
+D + V+VP+EN+L + DG K+ + VV +
Sbjct: 241 GQRCSDTRGIVFEDVKVPKENVL------IGDGAGFKVAMGAFDKTRPVV------AAGA 288
Query: 306 LPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAVSLL 365
+ + Q+A A +Y++ R+ T + L AIS+ +A+ +
Sbjct: 289 VGLAQRALDEATKYALERK-----------------TFGKLLVEHQAISFMLAEMAMKV- 330
Query: 366 EFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPS 425
E + SY + S + S KA + Q A + GG+G++ +
Sbjct: 331 ELARMSYQRAAWEVDSGRRNTYYASIA-KAFAGDIANQLATDAVQILGGNGFNTEYPVEK 389
Query: 426 LVTKLSASCTYEGENTVLYLQVARFLVKSY 455
L+ YEG + + L VAR + Y
Sbjct: 390 LMRDAKIYQIYEGTSQIQRLIVAREHIDKY 419
>gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain
precursor [Homo sapiens]
Length = 432
Score = 34.3 bits (77), Expect = 0.39
Identities = 70/333 (21%), Positives = 123/333 (36%), Gaps = 53/333 (15%)
Query: 126 LRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTL 185
+R G+EEQ A + P + + ++ +E G G+ L+T A D +V L
Sbjct: 150 IRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYV-----L 201
Query: 186 TATKWWPGDLGRSATHA---LVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIG 242
+K W SA HA LV A + + +G+ +F+V PG+ IG
Sbjct: 202 NGSKMWIS----SAEHAGLFLVMANVDPTIGYKGITSFLVD-------RDTPGLHIGKPE 250
Query: 243 PKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLS 302
K+ + L +V+VP N+L + G +G+ + + + L
Sbjct: 251 NKLGLRASSTCPLTFENVKVPEANILGQIGH----GYKYAIGSLNEGRIGIAAQMLGLAQ 306
Query: 303 GEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAV 362
G Y++ + R++ ++ D+Q Q ++ A A
Sbjct: 307 G------------CFDYTIPYIKERIQFG---KRLFDFQGLQHQV-----AHVATQLEAA 346
Query: 363 SLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSG 422
LL + + +L F+ E ++ K SE Q C GG GY+K
Sbjct: 347 RLLTY---NAARLLEAGKPFIKE----ASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYP 399
Query: 423 LPSLVTKLSASCTYEGENTVLYLQVARFLVKSY 455
+ YEG + + +A+ + Y
Sbjct: 400 VEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 432
>gi|5730095 tumor necrosis factor receptor superfamily, member 9
precursor [Homo sapiens]
Length = 255
Score = 31.6 bits (70), Expect = 2.5
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 377 NQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPSLVTKLSASCTY 436
N + P H L G +M + C QG E+ ++ C + + + + +C+
Sbjct: 83 NAECDCTPGFHCLGAGC-SMCEQDCKQGQELTKKGCKDCCFGTFNDQKRGICRPWTNCSL 141
Query: 437 EGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLARCP 486
+G++ LV + + G +P LSP + +T P AR P
Sbjct: 142 DGKSV---------LVNGTKERDVVCGPSP-ADLSPGASSVTPPAPAREP 181
>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
sapiens]
Length = 1094
Score = 31.6 bits (70), Expect = 2.5
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 425 SLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLAR 484
S V + ++C E E+ + L + R+ T+ SP P+R L + P+
Sbjct: 322 SKVDGILSNCGIEKESDLCVLNLIRYTAT----TKCSPSVDPERVLWSLRDHPLLPEAEA 377
Query: 485 CPAQRAADFLCPELYTTAWAHV-AVRLIKDSVQHLQTL 521
C Q D WA V AV L+ SV +Q L
Sbjct: 378 CVRQHLPDLYAAAGGVNIWALVAAVVLLSSSVNDIQRL 415
>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
sapiens]
Length = 1043
Score = 31.6 bits (70), Expect = 2.5
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 425 SLVTKLSASCTYEGENTVLYLQVARFLVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLAR 484
S V + ++C E E+ + L + R+ T+ SP P+R L + P+
Sbjct: 271 SKVDGILSNCGIEKESDLCVLNLIRYTAT----TKCSPSVDPERVLWSLRDHPLLPEAEA 326
Query: 485 CPAQRAADFLCPELYTTAWAHV-AVRLIKDSVQHLQTL 521
C Q D WA V AV L+ SV +Q L
Sbjct: 327 CVRQHLPDLYAAAGGVNIWALVAAVVLLSSSVNDIQRL 364
>gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo
sapiens]
Length = 415
Score = 30.8 bits (68), Expect = 4.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 116 LNIHRVFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEA 169
++IH + + S G+EEQ K+ P ++ A+Y TE G G+ L T A
Sbjct: 123 ISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSA 176
>gi|4503011 carboxypeptidase N, polypeptide 1 precursor [Homo
sapiens]
Length = 458
Score = 30.0 bits (66), Expect = 7.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 2 GSPVHRVSLGDTWSRQMHPDIESE-RYMQSFDVERLTNILDGGA 44
G P H + L D W Q+ P+ + R+M SF+ N L GGA
Sbjct: 177 GGPNHHLPLPDNWKSQVEPETRAVIRWMHSFNFVLSAN-LHGGA 219
>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
Length = 4024
Score = 30.0 bits (66), Expect = 7.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 96 WLEDGRELGYAYRALSGDVALNIHRV-FVRALRSLGSEEQIAKWDPLCKNIQI 147
W ELG Y L+GD+ ++ V ++ A S + Q +W LCK I
Sbjct: 2890 WSHTALELGQLYINLTGDILISSGVVAYLGAFTSTYRQNQTKEWTTLCKGRDI 2942
>gi|7706757 H(+)-transporting two-sector ATPase [Homo sapiens]
Length = 247
Score = 29.6 bits (65), Expect = 9.6
Identities = 17/59 (28%), Positives = 24/59 (40%)
Query: 25 ERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSYPEFSCKDNYFMTQNERYKAAMRR 83
E Y + D LT + GG Q L+R + E + F+T +E K RR
Sbjct: 110 EHYHEGTDSYELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRR 168
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,710,123
Number of Sequences: 37866
Number of extensions: 1034659
Number of successful extensions: 2384
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2334
Number of HSP's gapped (non-prelim): 32
length of query: 681
length of database: 18,247,518
effective HSP length: 109
effective length of query: 572
effective length of database: 14,120,124
effective search space: 8076710928
effective search space used: 8076710928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.