BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|42740907 clusterin isoform 2 [Homo sapiens] (449 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|42740907 clusterin isoform 2 [Homo sapiens] 914 0.0 gi|42716297 clusterin isoform 1 [Homo sapiens] 914 0.0 gi|40316926 clusterin-like 1 (retinal) [Homo sapiens] 156 3e-38 gi|7657490 clusterin-like 1 (retinal) [Homo sapiens] 156 3e-38 gi|118498356 kinectin 1 isoform a [Homo sapiens] 37 0.036 gi|33620775 kinectin 1 isoform a [Homo sapiens] 37 0.036 gi|7705682 geminin [Homo sapiens] 36 0.062 gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] 36 0.062 gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 36 0.062 gi|118498362 kinectin 1 isoform b [Homo sapiens] 36 0.081 gi|118498368 kinectin 1 isoform c [Homo sapiens] 36 0.081 gi|9910266 kinesin family member 15 [Homo sapiens] 35 0.11 gi|47174859 tripartite motif-containing 46 [Homo sapiens] 35 0.11 gi|31982906 cingulin-like 1 [Homo sapiens] 35 0.14 gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 35 0.18 gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 35 0.18 gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s... 35 0.18 gi|51479166 bicaudal D homolog 2 isoform 1 [Homo sapiens] 35 0.18 gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 35 0.18 gi|21735417 bicaudal D homolog 2 isoform 2 [Homo sapiens] 35 0.18 gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 34 0.24 gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 34 0.24 gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 34 0.24 gi|154689866 hypothetical protein LOC9778 [Homo sapiens] 34 0.24 gi|154689751 hypothetical protein LOC9778 [Homo sapiens] 34 0.24 gi|93102364 SWAP-70 protein [Homo sapiens] 34 0.31 gi|22027627 TNF receptor-associated factor 5 [Homo sapiens] 34 0.31 gi|77404348 TNF receptor-associated factor 5 [Homo sapiens] 34 0.31 gi|11321603 TNF receptor-associated factor 5 [Homo sapiens] 34 0.31 gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.31 >gi|42740907 clusterin isoform 2 [Homo sapiens] Length = 449 Score = 914 bits (2363), Expect = 0.0 Identities = 449/449 (100%), Positives = 449/449 (100%) Query: 1 MMKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLI 60 MMKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLI Sbjct: 1 MMKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLI 60 Query: 61 EKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQT 120 EKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQT Sbjct: 61 EKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQT 120 Query: 121 CMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHF 180 CMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHF Sbjct: 121 CMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHF 180 Query: 181 SRASSIIDELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNF 240 SRASSIIDELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNF Sbjct: 181 SRASSIIDELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNF 240 Query: 241 HAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKD 300 HAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKD Sbjct: 241 HAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKD 300 Query: 301 QCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLE 360 QCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLE Sbjct: 301 QCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLE 360 Query: 361 QLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSGVTEVVVKLFDSDPITVTVP 420 QLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSGVTEVVVKLFDSDPITVTVP Sbjct: 361 QLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSGVTEVVVKLFDSDPITVTVP 420 Query: 421 VEVSRKNPKFMETVAEKALQEYRKKHREE 449 VEVSRKNPKFMETVAEKALQEYRKKHREE Sbjct: 421 VEVSRKNPKFMETVAEKALQEYRKKHREE 449 >gi|42716297 clusterin isoform 1 [Homo sapiens] Length = 501 Score = 914 bits (2363), Expect = 0.0 Identities = 449/449 (100%), Positives = 449/449 (100%) Query: 1 MMKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLI 60 MMKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLI Sbjct: 53 MMKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLI 112 Query: 61 EKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQT 120 EKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQT Sbjct: 113 EKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQT 172 Query: 121 CMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHF 180 CMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHF Sbjct: 173 CMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHF 232 Query: 181 SRASSIIDELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNF 240 SRASSIIDELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNF Sbjct: 233 SRASSIIDELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNF 292 Query: 241 HAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKD 300 HAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKD Sbjct: 293 HAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKD 352 Query: 301 QCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLE 360 QCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLE Sbjct: 353 QCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLE 412 Query: 361 QLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSGVTEVVVKLFDSDPITVTVP 420 QLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSGVTEVVVKLFDSDPITVTVP Sbjct: 413 QLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSGVTEVVVKLFDSDPITVTVP 472 Query: 421 VEVSRKNPKFMETVAEKALQEYRKKHREE 449 VEVSRKNPKFMETVAEKALQEYRKKHREE Sbjct: 473 VEVSRKNPKFMETVAEKALQEYRKKHREE 501 >gi|40316926 clusterin-like 1 (retinal) [Homo sapiens] Length = 466 Score = 156 bits (395), Expect = 3e-38 Identities = 122/478 (25%), Positives = 219/478 (45%), Gaps = 51/478 (10%) Query: 1 MMKTLLLFVGLLL---------TWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVN 51 M LL+F+ LL TW+ D+T L+ S G ++E++ A+ Sbjct: 1 MKPPLLVFIVCLLWLKDSHCAPTWK------DKTAISENLKSFSEVGEIDADEEVKKALT 54 Query: 52 GVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWE 111 G+KQ+K ++E+ +E L+S L++ +++K++AL E + L+E +C E++ W Sbjct: 55 GIKQMKIMMERKEKEHTNLMSTLKKCREEKQEALKLLNEVQEHLEEEERLCRESLADSWG 114 Query: 112 ECKPCLKQTCMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDR------IDSLLEN 165 EC+ CL+ CM+ Y C+ V ++E F + F F + D + L+E Sbjct: 115 ECRSCLENNCMRIYT-TCQPSWSSVKNKIERFFRKIYQFLFPFHEDNEKDLPISEKLIEE 173 Query: 166 DRQQTHMLDVMQDHFSRASSIIDELFQDRF-FTREPQDTY------HYLPFSLPHRRPHF 218 D Q T M DV FS+ + ++ LF F R+ Q + H++ P+F Sbjct: 174 DAQLTQMEDV----FSQLTVDVNSLFNRSFNVFRQMQQEFDQTFQSHFIS-DTDLTEPYF 228 Query: 219 F--FPKSRIVRSLMPFSPYEPLNFHAMFQPFLEMIHEA---------QQAMDIHFHSPAF 267 F F K + ++ + ++ NF +F F I+E+ + D+ A Sbjct: 229 FPAFSKEPMTKADLE-QCWDIPNFFQLFCNFSVSIYESVSETITKMLKAIEDLPKQDKAP 287 Query: 268 QHPPTEFIREGDDDRTVCREIRHNSTGCLRMKDQCDKCREILSVDCSTNNPSQAKLRREL 327 H DR +C E+ N + C + ++C KC+ LS DC P L EL Sbjct: 288 DHGGLISKMLPGQDRGLCGELDQNLSRCFKFHEKCQKCQAHLSEDC----PDVPALHTEL 343 Query: 328 DESLQVAERLTRKYNELLKSYQWKMLNTSSLLEQLNEQFNWVSRLANLTQGEDQYYLRVT 387 DE++++ ++Y ++L+ + + +T+ L+E++ QF WVS LAN + + + Sbjct: 344 DEAIRLVNVSNQQYGQILQMTRKHLEDTAYLVEKMRGQFGWVSELANQAPETEIIFNSIQ 403 Query: 388 TVAS-HTSDSDVPSGVTEVVVKLFDSDPITVTVPVEVSRKNPKFMETVAEKALQEYRK 444 V H + + + S T+ +P+E S ++ F+ V KALQ +++ Sbjct: 404 VVPRIHEGNISKQDETMMTDLSILPSSNFTLKIPLEESAESSNFIGYVVAKALQHFKE 461 >gi|7657490 clusterin-like 1 (retinal) [Homo sapiens] Length = 466 Score = 156 bits (395), Expect = 3e-38 Identities = 122/478 (25%), Positives = 219/478 (45%), Gaps = 51/478 (10%) Query: 1 MMKTLLLFVGLLL---------TWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVN 51 M LL+F+ LL TW+ D+T L+ S G ++E++ A+ Sbjct: 1 MKPPLLVFIVCLLWLKDSHCAPTWK------DKTAISENLKSFSEVGEIDADEEVKKALT 54 Query: 52 GVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWE 111 G+KQ+K ++E+ +E L+S L++ +++K++AL E + L+E +C E++ W Sbjct: 55 GIKQMKIMMERKEKEHTNLMSTLKKCREEKQEALKLLNEVQEHLEEEERLCRESLADSWG 114 Query: 112 ECKPCLKQTCMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDR------IDSLLEN 165 EC+ CL+ CM+ Y C+ V ++E F + F F + D + L+E Sbjct: 115 ECRSCLENNCMRIYT-TCQPSWSSVKNKIERFFRKIYQFLFPFHEDNEKDLPISEKLIEE 173 Query: 166 DRQQTHMLDVMQDHFSRASSIIDELFQDRF-FTREPQDTY------HYLPFSLPHRRPHF 218 D Q T M DV FS+ + ++ LF F R+ Q + H++ P+F Sbjct: 174 DAQLTQMEDV----FSQLTVDVNSLFNRSFNVFRQMQQEFDQTFQSHFIS-DTDLTEPYF 228 Query: 219 F--FPKSRIVRSLMPFSPYEPLNFHAMFQPFLEMIHEA---------QQAMDIHFHSPAF 267 F F K + ++ + ++ NF +F F I+E+ + D+ A Sbjct: 229 FPAFSKEPMTKADLE-QCWDIPNFFQLFCNFSVSIYESVSETITKMLKAIEDLPKQDKAP 287 Query: 268 QHPPTEFIREGDDDRTVCREIRHNSTGCLRMKDQCDKCREILSVDCSTNNPSQAKLRREL 327 H DR +C E+ N + C + ++C KC+ LS DC P L EL Sbjct: 288 DHGGLISKMLPGQDRGLCGELDQNLSRCFKFHEKCQKCQAHLSEDC----PDVPALHTEL 343 Query: 328 DESLQVAERLTRKYNELLKSYQWKMLNTSSLLEQLNEQFNWVSRLANLTQGEDQYYLRVT 387 DE++++ ++Y ++L+ + + +T+ L+E++ QF WVS LAN + + + Sbjct: 344 DEAIRLVNVSNQQYGQILQMTRKHLEDTAYLVEKMRGQFGWVSELANQAPETEIIFNSIQ 403 Query: 388 TVAS-HTSDSDVPSGVTEVVVKLFDSDPITVTVPVEVSRKNPKFMETVAEKALQEYRK 444 V H + + + S T+ +P+E S ++ F+ V KALQ +++ Sbjct: 404 VVPRIHEGNISKQDETMMTDLSILPSSNFTLKIPLEESAESSNFIGYVVAKALQHFKE 461 >gi|118498356 kinectin 1 isoform a [Homo sapiens] Length = 1357 Score = 37.0 bits (84), Expect = 0.036 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Query: 19 QVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAK 78 Q+ T S+ EL+ + ++ NK+I+N + ++ +EK ER T ++ + E K Sbjct: 1177 QMQSSFTSSEQELERLRSE-----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELK 1231 Query: 79 -------KKKEDALNETRESETKLKELPGVCNETMMALWEE 112 KK +D+ +E +L L NET+ L E Sbjct: 1232 DLLTELQKKLDDSYSEAVRQNEELNLLKAQLNETLTKLRTE 1272 >gi|33620775 kinectin 1 isoform a [Homo sapiens] Length = 1357 Score = 37.0 bits (84), Expect = 0.036 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Query: 19 QVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAK 78 Q+ T S+ EL+ + ++ NK+I+N + ++ +EK ER T ++ + E K Sbjct: 1177 QMQSSFTSSEQELERLRSE-----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELK 1231 Query: 79 -------KKKEDALNETRESETKLKELPGVCNETMMALWEE 112 KK +D+ +E +L L NET+ L E Sbjct: 1232 DLLTELQKKLDDSYSEAVRQNEELNLLKAQLNETLTKLRTE 1272 >gi|7705682 geminin [Homo sapiens] Length = 209 Score = 36.2 bits (82), Expect = 0.062 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 28 DNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALNE 87 DNE+ + + NKE+ V+ + LIE+ N E L N E ++ D+ E Sbjct: 128 DNEIARLKKE-----NKELAEVAEHVQYMAELIERLNGEP---LDNFESLDNQEFDSEEE 179 Query: 88 TRESETKLKELPGVCNETMMALWEECKPCL 117 T E G C E ++ + KPC+ Sbjct: 180 TVEDSLVEDSEIGTCAEGTVSSSTDAKPCI 209 >gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] Length = 1044 Score = 36.2 bits (82), Expect = 0.062 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Query: 15 WESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNL 74 WE+G+ ++ N QE+ + K +KEI+ ++ ++ L ++ E K S + Sbjct: 830 WEAGRTRKEEAWLLNREQELREEIRKGRDKEIELVIHRLEADMALAKE--ESEKAAESRI 887 Query: 75 EEAKKKKEDALNETRESETKLKE 97 + + K E L+E +SE KL+E Sbjct: 888 KRLRDKYEAELSELEQSERKLQE 910 >gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] Length = 1080 Score = 36.2 bits (82), Expect = 0.062 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Query: 15 WESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNL 74 WE+G+ ++ N QE+ + K +KEI+ ++ ++ L ++ E K S + Sbjct: 866 WEAGRTRKEEAWLLNREQELREEIRKGRDKEIELVIHRLEADMALAKE--ESEKAAESRI 923 Query: 75 EEAKKKKEDALNETRESETKLKE 97 + + K E L+E +SE KL+E Sbjct: 924 KRLRDKYEAELSELEQSERKLQE 946 >gi|118498362 kinectin 1 isoform b [Homo sapiens] Length = 1306 Score = 35.8 bits (81), Expect = 0.081 Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 19 QVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAK 78 Q+ T S+ EL+ + ++ NK+I+N + ++ +EK ER T ++ + E K Sbjct: 1154 QMQSSFTSSEQELERLRSE-----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELK 1208 Query: 79 KKKEDALNETRESETKLKELPGVCNETMMAL 109 + + L + R + + +++ G ++ +L Sbjct: 1209 AQLNETLTKLRTEQNERQKVAGDLHKAQQSL 1239 >gi|118498368 kinectin 1 isoform c [Homo sapiens] Length = 1300 Score = 35.8 bits (81), Expect = 0.081 Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 19 QVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAK 78 Q+ T S+ EL+ + ++ NK+I+N + ++ +EK ER T ++ + E K Sbjct: 1148 QMQSSFTSSEQELERLRSE-----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELK 1202 Query: 79 KKKEDALNETRESETKLKELPGVCNETMMAL 109 + + L + R + + +++ G ++ +L Sbjct: 1203 AQLNETLTKLRTEQNERQKVAGDLHKAQQSL 1233 >gi|9910266 kinesin family member 15 [Homo sapiens] Length = 1388 Score = 35.4 bits (80), Expect = 0.11 Identities = 87/408 (21%), Positives = 167/408 (40%), Gaps = 50/408 (12%) Query: 19 QVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEE-- 76 ++L + +N+L + + +KEI + V+Q K E++ + LEE Sbjct: 904 ELLEAEKERNNKLSLQFEEDKENSSKEILKVLEAVRQEKQKETAKCEQQMAKVQKLEESL 963 Query: 77 -AKKKKEDALNETRESETK--------LKEL-PGVC--NETMMALWEECKPCLKQTCMKF 124 A +K +L ++R+S+ K ++EL VC ET+ L +E K C Sbjct: 964 LATEKVISSLEKSRDSDKKVVADLMNQIQELRTSVCEKTETIDTLKQELKDI---NCKYN 1020 Query: 125 YARVCRSGSG-LVGRQLEEFLNQSSPFYFWMNGDRI--DSLLENDRQQTHMLDVMQDHFS 181 A V R S L+ +Q + L+ + + I D L E+ T L+++ + Sbjct: 1021 SALVDREESRVLIKKQEVDILDLKETLRLRILSEDIERDMLCEDLAHATEQLNMLTEASK 1080 Query: 182 RASSII----DELFQDRFFTREPQDTYHYLPFSLPHRRPHFFFPKSRIVRSLM------P 231 + S ++ +EL + +E Q + + ++ + F K R + +M P Sbjct: 1081 KHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNF-KMRQLEHVMDSAAEDP 1139 Query: 232 FSPYEPLNFHAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHN 291 SP P +F LE + Q+ D + +H T+ ++DR V Sbjct: 1140 QSPKTPPHFQTHLAKLLET--QEQEIEDGRASKTSLEHLVTKL----NEDREV------K 1187 Query: 292 STGCLRMKDQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKY--NELLKSYQ 349 + LRMK+Q + E L ++ L+ +LD+ + E + + N+ LK+ Q Sbjct: 1188 NAEILRMKEQLRE-MENLRLESQQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQLKNEQ 1246 Query: 350 ----WKMLNTSSLLEQLNEQFNWVSRLANLTQGEDQYYLRVTTVASHT 393 + L S ++E++ + + + + ++ LR+T T Sbjct: 1247 EESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMECLRMTDEVERT 1294 >gi|47174859 tripartite motif-containing 46 [Homo sapiens] Length = 759 Score = 35.4 bits (80), Expect = 0.11 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 2/124 (1%) Query: 13 LTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQ-IKTLIEKTNEERKTLL 71 LT +LG+Q ++ E+ + ++ Q A V Q ++ L E+R +LL Sbjct: 274 LTKSLTYILGNQDTVQTQICELE-EAVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLL 332 Query: 72 SNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQTCMKFYARVCRS 131 +EE ++++ L+ + L + G+ L E +PC Q + + R+ R+ Sbjct: 333 QAIEECQQERLARLSAQIQEHRSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARA 392 Query: 132 GSGL 135 L Sbjct: 393 TEAL 396 >gi|31982906 cingulin-like 1 [Homo sapiens] Length = 1302 Score = 35.0 bits (79), Expect = 0.14 Identities = 69/367 (18%), Positives = 153/367 (41%), Gaps = 44/367 (11%) Query: 33 EMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLS--NLEEAKKKKEDALNETRE 90 E+ NQ +Y K + +Q+K EKT E K+ L+ +++ + E+ L + + Sbjct: 970 ELQNQLDEYKEKNRRELAEMQRQLK---EKTLEAEKSRLTAMKMQDEMRLMEEELRDYQR 1026 Query: 91 SETKLKELPGVCNETMMALWEECKPCLKQTCMKFYARVCRSGSGLVGRQLEEFLNQSSPF 150 ++ + + +T+ L E + K + + RS + +Q+E+ ++Q Sbjct: 1027 AQDEALTKRQLLEQTLKDLEYELEA-------KSHLKDDRSR---LVKQMEDKVSQ---- 1072 Query: 151 YFWMNGDRIDSLLENDRQQTHMLDVMQDHFSRASSIIDELFQDRFFTREPQDTYHYLPFS 210 ++ LE +R + D++ + SR+ +++L + R + S Sbjct: 1073 --------LEMELEEERNNS---DLLSERISRSREQMEQLRNELLQERAARQDLECDKIS 1121 Query: 211 LPHRRPHFFFPKSRIVRSLMPFSPYEP---LNFHAMFQPFLEMIH-EAQQAMDIHFHSPA 266 L + KSRI+ + + + A + + E + ++ + Sbjct: 1122 LERQNKDL---KSRIIHLEGSYRSSKEGLVVQMEARIAELEDRLESEERDRANLQLSNRR 1178 Query: 267 FQHPPTEFIREGDDDRTVCREIRHNSTGCLR-MKDQCDKCREILSVDCSTNNPSQAKLRR 325 + E + + DD+ + + + L+ MK Q ++ E + S+ KL+R Sbjct: 1179 LERKVKELVMQVDDEHLSLTDQKDQLSLRLKAMKRQVEEAEE----EIDRLESSKKKLQR 1234 Query: 326 ELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLEQLNEQFNWVSRLANLTQGEDQY-YL 384 EL+E + + E L + N + K + K L S +L+ +++ + + +L + Y + Sbjct: 1235 ELEEQMDMNEHLQGQLNSMKKDLRLKKL-PSKVLDDMDDDDDLSTDGGSLYEAPVSYTFS 1293 Query: 385 RVTTVAS 391 + +TVAS Sbjct: 1294 KDSTVAS 1300 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 13/91 (14%) Query: 27 SDNELQEMSNQGSKY------VNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKK 80 S +E++++ Q SK + +++Q V + IK EER+ + +NLEE + + Sbjct: 605 STSEVKDLLEQKSKLTIEVAELQRQLQLEVKNQQNIK-------EERERMRANLEELRSQ 657 Query: 81 KEDALNETRESETKLKELPGVCNETMMALWE 111 + + E + +L+E G + + L++ Sbjct: 658 HNEKVEENSTLQQRLEESEGELRKNLEELFQ 688 >gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo sapiens] Length = 1591 Score = 34.7 bits (78), Expect = 0.18 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Query: 51 NGVKQIKTLIEKTNEER--KTLLSNLEEAKKKKEDALNETRESETKLKELPG--VCNETM 106 N ++++K +E T +E+ K LLS E + K + + ET E+E K+K+L G VC E + Sbjct: 846 NIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELVCLEEV 905 Query: 107 M 107 + Sbjct: 906 L 906 >gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo sapiens] Length = 1594 Score = 34.7 bits (78), Expect = 0.18 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Query: 51 NGVKQIKTLIEKTNEER--KTLLSNLEEAKKKKEDALNETRESETKLKELPG--VCNETM 106 N ++++K +E T +E+ K LLS E + K + + ET E+E K+K+L G VC E + Sbjct: 846 NIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELVCLEEV 905 Query: 107 M 107 + Sbjct: 906 L 906 >gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo sapiens] Length = 1052 Score = 34.7 bits (78), Expect = 0.18 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 9/93 (9%) Query: 294 GCLRMKDQC-DKCREILSV-------DCSTNNPSQAKLRRELDESLQVAERLTRKYNELL 345 GCL+ QC + LS + S ++ S+A EL++SLQ RL +L Sbjct: 207 GCLQYSLQCIGELERALSAVTTTEEKEISFSSRSRAHTEWELEQSLQEKARLKAXLTQLK 266 Query: 346 KSYQWKMLNTSSLLEQL-NEQFNWVSRLANLTQ 377 +S+Q L + +Q+ E+ W R+ ++Q Sbjct: 267 ESFQQVQLQRDNYAQQIKGERARWQQRMRKMSQ 299 >gi|51479166 bicaudal D homolog 2 isoform 1 [Homo sapiens] Length = 855 Score = 34.7 bits (78), Expect = 0.18 Identities = 22/81 (27%), Positives = 38/81 (46%) Query: 58 TLIEKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCL 117 +L+EK + + + LL+ LE+ KK D ET+ S + ++ +E + L+ C Sbjct: 486 SLLEKASRQDRELLARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCN 545 Query: 118 KQTCMKFYARVCRSGSGLVGR 138 +T + R G G GR Sbjct: 546 NETPNRVMLDYYREGQGGAGR 566 >gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens] Length = 2603 Score = 34.7 bits (78), Expect = 0.18 Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 34 MSNQGSKYVNKEIQNAVNGVKQ-IKTLIEKTNEERKTLLSNLEEAKKKKEDALNETRESE 92 ++NQ + + +E Q + ++Q IK IEK + + L++ ++ K+K + LN+TRE + Sbjct: 799 ITNQSPESIVEEAQGKLTELEQRIKEAIEKNAQLQSLELAHADQLTKEKIEELNKTREEQ 858 Query: 93 TKLKE 97 + K+ Sbjct: 859 IQKKQ 863 >gi|21735417 bicaudal D homolog 2 isoform 2 [Homo sapiens] Length = 824 Score = 34.7 bits (78), Expect = 0.18 Identities = 22/81 (27%), Positives = 38/81 (46%) Query: 58 TLIEKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCL 117 +L+EK + + + LL+ LE+ KK D ET+ S + ++ +E + L+ C Sbjct: 486 SLLEKASRQDRELLARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCN 545 Query: 118 KQTCMKFYARVCRSGSGLVGR 138 +T + R G G GR Sbjct: 546 NETPNRVMLDYYREGQGGAGR 566 >gi|38570058 hypothetical protein LOC80129 [Homo sapiens] Length = 715 Score = 34.3 bits (77), Expect = 0.24 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 13/114 (11%) Query: 14 TWESGQVLGDQTVSDNELQEMSNQGSKY---VNKEIQNAVNGVKQIK----TLIEKTNEE 66 T E + + D S ++L++M + K V E+ + K+ K +IE E Sbjct: 573 TLEQTKAIEDLNKSRDQLEKMKEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSE 632 Query: 67 RKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWE-ECKPCLKQ 119 KTL +LEEA +K+E L + RE +++ L N T +AL + E CL++ Sbjct: 633 MKTLKKSLEEA-EKREKQLADFREVVSQMLGL----NVTSLALPDYEIIKCLER 681 >gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] Length = 1173 Score = 34.3 bits (77), Expect = 0.24 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 12/83 (14%) Query: 19 QVLGDQTVS-DNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEA 77 Q L +QTV E+Q + +EI++A V ++T +EK +E++ L++ + Sbjct: 746 QQLEEQTVELSTEVQSLY--------REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS 797 Query: 78 KKKKEDALNETRESETKLKELPG 100 K +D LN+ +E K+K + G Sbjct: 798 NKIAQDKLNDIKE---KVKNIHG 817 >gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] Length = 1312 Score = 34.3 bits (77), Expect = 0.24 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 12/83 (14%) Query: 19 QVLGDQTVS-DNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEA 77 Q L +QTV E+Q + +EI++A V ++T +EK +E++ L++ + Sbjct: 885 QQLEEQTVELSTEVQSLY--------REIKDAKEQVSPLETTLEKFQQEKEELINKKNTS 936 Query: 78 KKKKEDALNETRESETKLKELPG 100 K +D LN+ +E K+K + G Sbjct: 937 NKIAQDKLNDIKE---KVKNIHG 956 >gi|154689866 hypothetical protein LOC9778 [Homo sapiens] Length = 1395 Score = 34.3 bits (77), Expect = 0.24 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 23/125 (18%) Query: 11 LLLTWESGQVL----GDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEE 66 + L WE G + SD L+EM Q + + + +G I+TL+E+ Sbjct: 81 IFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSG---IETLVEELCSR 137 Query: 67 RKTLLSNLEEAKKKK---------------EDALNETRESETKLKELPGVCNETMMALWE 111 K L S EE KK +D + E+ L E P VC + +M +W Sbjct: 138 LKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKP-VCLQEIMTVWN 196 Query: 112 ECKPC 116 + K C Sbjct: 197 KSKVC 201 >gi|154689751 hypothetical protein LOC9778 [Homo sapiens] Length = 1395 Score = 34.3 bits (77), Expect = 0.24 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 23/125 (18%) Query: 11 LLLTWESGQVL----GDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEE 66 + L WE G + SD L+EM Q + + + +G I+TL+E+ Sbjct: 81 IFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSG---IETLVEELCSR 137 Query: 67 RKTLLSNLEEAKKKK---------------EDALNETRESETKLKELPGVCNETMMALWE 111 K L S EE KK +D + E+ L E P VC + +M +W Sbjct: 138 LKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKP-VCLQEIMTVWN 196 Query: 112 ECKPC 116 + K C Sbjct: 197 KSKVC 201 >gi|93102364 SWAP-70 protein [Homo sapiens] Length = 585 Score = 33.9 bits (76), Expect = 0.31 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 13/89 (14%) Query: 15 WESGQVLGDQTVSDNELQEMSNQGSKYVNKE--IQNAVNGVKQIKTLIEKTNEERKTLLS 72 W Q QT ++ E QE+ NQ V KE +Q A+ ++Q++ ERK L Sbjct: 467 WHLEQQQAIQT-TEAEKQELENQR---VLKEQALQEAMEQLEQLEL-------ERKQALE 515 Query: 73 NLEEAKKKKEDALNETRESETKLKELPGV 101 EE KKK E A N+T+ + K+ G+ Sbjct: 516 QYEEVKKKLEMATNKTKSWKDKVAHHEGL 544 >gi|22027627 TNF receptor-associated factor 5 [Homo sapiens] Length = 557 Score = 33.9 bits (76), Expect = 0.31 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%) Query: 31 LQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALN---- 86 LQ ++ Q +K+ + + AV+ VKQ TL+E N++R L+ LEE K + +N Sbjct: 330 LQMVNQQQNKFDLRPLMEAVDTVKQKITLLE-NNDQR---LAVLEEETNKHDTHINIHKA 385 Query: 87 ETRESETKLKELPGVC 102 + ++E + K L G C Sbjct: 386 QLSKNEERFKLLEGTC 401 >gi|77404348 TNF receptor-associated factor 5 [Homo sapiens] Length = 557 Score = 33.9 bits (76), Expect = 0.31 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%) Query: 31 LQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALN---- 86 LQ ++ Q +K+ + + AV+ VKQ TL+E N++R L+ LEE K + +N Sbjct: 330 LQMVNQQQNKFDLRPLMEAVDTVKQKITLLE-NNDQR---LAVLEEETNKHDTHINIHKA 385 Query: 87 ETRESETKLKELPGVC 102 + ++E + K L G C Sbjct: 386 QLSKNEERFKLLEGTC 401 >gi|11321603 TNF receptor-associated factor 5 [Homo sapiens] Length = 557 Score = 33.9 bits (76), Expect = 0.31 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%) Query: 31 LQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALN---- 86 LQ ++ Q +K+ + + AV+ VKQ TL+E N++R L+ LEE K + +N Sbjct: 330 LQMVNQQQNKFDLRPLMEAVDTVKQKITLLE-NNDQR---LAVLEEETNKHDTHINIHKA 385 Query: 87 ETRESETKLKELPGVC 102 + ++E + K L G C Sbjct: 386 QLSKNEERFKLLEGTC 401 >gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] Length = 1118 Score = 33.9 bits (76), Expect = 0.31 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Query: 16 ESGQVLGDQTVSD---NELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLS 72 +SG+V+ D++ + ++++ ++ E + KQ K L E+ EE+K L Sbjct: 436 QSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKELRERQQEEQKEKLR 495 Query: 73 NLEE---AKKKKEDALNETRESETKLKE 97 E+ AKKK+E NE E + K KE Sbjct: 496 KEEQEQKAKKKQEAEENEITEKQQKAKE 523 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,809,196 Number of Sequences: 37866 Number of extensions: 750460 Number of successful extensions: 4167 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 113 Number of HSP's that attempted gapping in prelim test: 3729 Number of HSP's gapped (non-prelim): 549 length of query: 449 length of database: 18,247,518 effective HSP length: 106 effective length of query: 343 effective length of database: 14,233,722 effective search space: 4882166646 effective search space used: 4882166646 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.