Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF124 Sequence: fasta or formatted (289aa) NCBI GI: 42733608
Description:

zinc finger protein 124

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         15           1
 C cysteine            6.2         18           1
 D aspartate           2.4          7           1
 E glutamate           8.7         25           2
 F phenylalanine       3.8         11           1
 G glycine             7.3         21           1
 H histidine           6.9         20           1
 I isoleucine          2.1          6           1
 K lysine             10.7         31           2
 L leucine             4.8         14           2
 M methionine          2.1          6           1
 N asparagine          4.2         12           2
 P proline             3.5         10           1
 Q glutamine           4.5         13           1
 R arginine            6.2         18           1
 S serine              9.0         26           3
 T threonine           4.8         14           1
 V valine              2.1          6           1
 W tryptophan          1.0          3           1
 Y tyrosine            4.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 124 
ZNF709                0.554   zinc finger protein 709 isoform a 
ZNF791                0.545   zinc finger protein 791 
ZNF670                0.527   zinc finger protein 670 
ZNF490                0.526   zinc finger protein 490 
LOC100290283          0.521   PREDICTED: hypothetical protein XP_002347961 
ZNF136                0.506   zinc finger protein 136 
ZNF627                0.504   zinc finger protein 627 
ZNF177                0.501   zinc finger protein 177 
LOC729747             0.498   similar to zinc finger protein 709 
ZNF709                0.496   zinc finger protein 709 isoform b 
ZNF669                0.496   zinc finger protein 669 isoform 2 
LOC100292533          0.494   PREDICTED: similar to zinc finger protein 564 [Homo...
ZNF669                0.493   zinc finger protein 669 isoform 1 
ZNF564                0.491   zinc finger protein 564 
LOC100290363          0.491   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.491   PREDICTED: hypothetical protein XP_002343682 
ZNF844                0.479   zinc finger protein 844 
ZNF14                 0.478   zinc finger protein 14 
ZNF433                0.476   zinc finger protein 433 
LOC344065             0.460   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.460   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.460   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF20                 0.458   zinc finger protein 20 
ZNF700                0.456   zinc finger protein 700 
ZNF135                0.456   zinc finger protein 135 
ZNF782                0.455   zinc finger protein 782 
ZNF699                0.451   zinc finger protein 699 
ZNF571                0.448   zinc finger protein 571 
ZNF77                 0.446   zinc finger protein 77 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press