Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF571 Sequence: fasta or formatted (609aa) NCBI GI: 89001105
Description:

zinc finger protein 571

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         20           1
 C cysteine            7.1         43           1
 D aspartate           1.8         11           1
 E glutamate          10.5         64           2
 F phenylalanine       3.6         22           2
 G glycine             7.2         44           1
 H histidine           6.9         42           2
 I isoleucine          5.3         32           2
 K lysine             10.3         63           2
 L leucine             6.4         39           2
 M methionine          1.1          7           1
 N asparagine          2.6         16           1
 P proline             3.3         20           1
 Q glutamine           6.2         38           1
 R arginine            5.3         32           1
 S serine              6.1         37           2
 T threonine           5.7         35           1
 V valine              2.0         12           1
 W tryptophan          0.3          2           1
 Y tyrosine            4.9         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 571 
ZNF420                0.617   zinc finger protein 420 
ZNF283                0.543   zinc finger protein 283 
ZNF546                0.512   zinc finger protein 546 
ZNF30                 0.501   zinc finger protein 30 isoform a 
ZNF30                 0.501   zinc finger protein 30 isoform a 
ZNF30                 0.500   zinc finger protein 30 isoform b 
ZNF595                0.494   zinc finger protein 595 
ZNF470                0.491   zinc finger protein 470 
ZNF540                0.491   zinc finger protein 540 
ZNF665                0.489   zinc finger protein 665 
ZNF780B               0.488   zinc finger protein 780B 
ZNF780A               0.486   zinc finger protein 780A isoform b 
ZNF780A               0.486   zinc finger protein 780A isoform b 
ZNF780A               0.485   zinc finger protein 780A isoform a 
ZNF429                0.483   zinc finger protein 429 
ZNF184                0.478   zinc finger protein 184 
ZNF726                0.477   PREDICTED: zinc finger protein 726 
ZNF726                0.477   PREDICTED: zinc finger protein 726 
ZNF726                0.477   PREDICTED: zinc finger protein 726 
ZNF569                0.470   zinc finger protein 569 
ZNF93                 0.466   zinc finger protein 93 
ZNF208                0.464   zinc finger protein 208 
ZNF616                0.463   zinc finger protein 616 
ZNF23                 0.461   zinc finger protein 23 
ZNF709                0.459   zinc finger protein 709 isoform a 
ZNF585B               0.459   zinc finger protein 585B 
ZNF345                0.458   zinc finger protein 345 
ZNF135                0.455   zinc finger protein 135 
ZNF568                0.454   zinc finger protein 568 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press