Search of human proteins with 42544151

Search of human proteins with 42544151

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42544151 AMME chromosomal region gene 1-like [Homo sapiens]
         (310 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42544151 AMME chromosomal region gene 1-like [Homo sapiens]        649   0.0  
gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]                   399   e-111
gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]                  306   2e-83
gi|28559039 mediator complex subunit 1 [Homo sapiens]                  35   0.085
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa...    35   0.11 
gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ...    33   0.32 
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p...    33   0.32 
gi|221219024 pleckstrin homology-like domain, family B, member 1...    33   0.42 
gi|38424073 pleckstrin homology-like domain, family B, member 1 ...    33   0.42 
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    32   0.55 
gi|208022703 modulator of retrovirus infection [Homo sapiens]          31   1.2  
gi|221219026 pleckstrin homology-like domain, family B, member 1...    31   1.6  
gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo ...    31   1.6  
gi|161016767 mucin 21 [Homo sapiens]                                   31   1.6  
gi|22547204 hairless protein isoform a [Homo sapiens]                  30   2.1  
gi|22547207 hairless protein isoform b [Homo sapiens]                  30   2.1  
gi|9507165 syntrophin, gamma 2 [Homo sapiens]                          30   2.1  
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]        30   2.7  
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]        30   2.7  
gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]              30   3.6  
gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo ...    30   3.6  
gi|27477127 keratin 82 [Homo sapiens]                                  30   3.6  
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    29   4.7  
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    29   4.7  
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    29   4.7  
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    29   4.7  
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    29   4.7  
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    29   4.7  
gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]            29   6.1  

>gi|42544151 AMME chromosomal region gene 1-like [Homo sapiens]
          Length = 310

 Score =  649 bits (1674), Expect = 0.0
 Identities = 310/310 (100%), Positives = 310/310 (100%)

Query: 1   MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG 60
           MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG
Sbjct: 1   MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG 60

Query: 61  RENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHL 120
           RENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHL
Sbjct: 61  RENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHL 120

Query: 121 YGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRF 180
           YGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRF
Sbjct: 121 YGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRF 180

Query: 181 PPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKE 240
           PPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKE
Sbjct: 181 PPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKE 240

Query: 241 QDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTL 300
           QDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTL
Sbjct: 241 QDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTL 300

Query: 301 HAPPLYNHYS 310
           HAPPLYNHYS
Sbjct: 301 HAPPLYNHYS 310


>gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]
          Length = 333

 Score =  399 bits (1024), Expect = e-111
 Identities = 212/333 (63%), Positives = 239/333 (71%), Gaps = 36/333 (10%)

Query: 14  LAAGCCGVKKPKL-----SGSGTHSHGNQSTTVPGSS---------SGPLQNHQHVDSSS 59
           +AAGCCGVKK KL     SGSG     + S+   G S          G       +   +
Sbjct: 1   MAAGCCGVKKQKLSSSPPSGSGGGGGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLT 60

Query: 60  GRENVSDLTLGP------GNSPI-----------TRMNPASGALSPLPRPNGTANT---- 98
           G  + S  TL P      G   I           T ++  + A S  P  +  A++    
Sbjct: 61  GGGSGSGCTLSPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASSSSPG 120

Query: 99  TKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFS 158
           ++ +VV+AEMCC+CFDVLYCHLYG+ QPR PRFTN+PYPLFVTWK GRDKRLRGCIGTFS
Sbjct: 121 SRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKIGRDKRLRGCIGTFS 180

Query: 159 AMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIR 218
           AMNLHSGLREYTLTSALKDSRFPP+TR+ELP+LFCSVSLLTNFED  DYLDWEVGVHGIR
Sbjct: 181 AMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIR 240

Query: 219 IEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSE 278
           IEFINEKG KRTATYLPEVAKEQ WD IQTIDSLLRKGG+KAPIT+EFRKTIKLTRYRSE
Sbjct: 241 IEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSE 300

Query: 279 KVTISYAEYIASRQ-HCFQNGTLHAPPLYNHYS 310
           K+T+SYAEY+A RQ H FQNG  H  P YNHYS
Sbjct: 301 KMTLSYAEYLAHRQHHHFQNGIGHPLPPYNHYS 333


>gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]
          Length = 296

 Score =  306 bits (783), Expect = 2e-83
 Identities = 177/333 (53%), Positives = 201/333 (60%), Gaps = 73/333 (21%)

Query: 14  LAAGCCGVKKPKLS-----GSGTHSHGNQSTTVPGSSS---------GPLQNHQHVDSSS 59
           +AAGCCGVKK KLS     GSG     + S+   G S          G       +   +
Sbjct: 1   MAAGCCGVKKQKLSSSPPSGSGGGGGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLT 60

Query: 60  GRENVSDLTLGP------GNSPITRMNPAS-----------GALSPLPRPNGTANTT--- 99
           G  + S  TL P      G   I    P S            A S  P  +  A+++   
Sbjct: 61  GGGSGSGCTLSPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASSSSPG 120

Query: 100 -KNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFS 158
            + +VV+AEMCC+CFDVLYCHLYG+ QPR PRFTN+PY                      
Sbjct: 121 SRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPRFTNEPY---------------------- 158

Query: 159 AMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIR 218
                          ALKDSRFPP+TR+ELP+LFCSVSLLTNFED  DYLDWEVGVHGIR
Sbjct: 159 ---------------ALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIR 203

Query: 219 IEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSE 278
           IEFINEKG KRTATYLPEVAKEQ WD IQTIDSLLRKGG+KAPIT+EFRKTIKLTRYRSE
Sbjct: 204 IEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSE 263

Query: 279 KVTISYAEYIASRQ-HCFQNGTLHAPPLYNHYS 310
           K+T+SYAEY+A RQ H FQNG  H  P YNHYS
Sbjct: 264 KMTLSYAEYLAHRQHHHFQNGIGHPLPPYNHYS 296


>gi|28559039 mediator complex subunit 1 [Homo sapiens]
          Length = 1581

 Score = 35.0 bits (79), Expect = 0.085
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 17/92 (18%)

Query: 27   SGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGR-----------------ENVSDLTL 69
            SGS +H   + S++   S+SG +++ +   SSS +                 +N S    
Sbjct: 1092 SGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGG 1151

Query: 70   GPGNSPITRMNPASGALSPLPRPNGTANTTKN 101
             PG+SPIT+   +SG+ S   +P G  ++  N
Sbjct: 1152 KPGSSPITKHGLSSGSSSTKMKPQGKPSSLMN 1183


>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
           sapiens]
          Length = 685

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 24/81 (29%), Positives = 31/81 (38%)

Query: 8   PPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDL 67
           P + P   A   GV++P  S S      +     P  SSGP+   Q+  SSSG E     
Sbjct: 355 PMVTPHNKAKSPGVRQPGSSSSSAPGQPSTGVARPTVSSGPVPRRQNGSSSSGPERSISG 414

Query: 68  TLGPGNSPITRMNPASGALSP 88
           +  P N         SG   P
Sbjct: 415 SKKPTNDSNPSRRTVSGTCGP 435


>gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 413

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 29  SGTHSHGNQ-STTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMN---PASG 84
           +GT + G    T +PG  + PL  H+H  S     +   +   PG +P  R+    P   
Sbjct: 54  TGTATEGQSVGTCLPGQFTRPLDRHRHRGSECWHLSSGSVHPSPGPAPAQRVRVLAPVFR 113

Query: 85  ALSPLPRPNGTA 96
             SPLPR  GTA
Sbjct: 114 ICSPLPR-TGTA 124



 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 8   PPLEPKLAAGCCGVKKPKLSGSGTHSHGNQ-STTVPGSSSGPLQNHQHVDSSSGRENVSD 66
           PP   ++ A    +  P +  +GT + G    T +P   + PL  H+H  S     +   
Sbjct: 191 PPQRVRVLAPVFRICSP-VPWTGTATEGQSVGTCLPDLFTRPLDRHRHRGSECWHLSSGS 249

Query: 67  LTLGPGNSPITRMN---PASGALSPLP 90
           +   PG++P  R+    P     SP+P
Sbjct: 250 VHPSPGSAPAQRVRVLAPVFRICSPVP 276


>gi|53829381 plasminogen activator, urokinase receptor isoform 3
           precursor [Homo sapiens]
          Length = 290

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 18  CCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDS--SSGRENVSDLTLGPGNSP 75
           C G     L  +GTH   NQS  V G ++  +  H H+    S    +VS  T    N P
Sbjct: 192 CRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHP 251

Query: 76  ITRMNPASGALSPLPRPNGTANTTKNLVVTAEM 108
              +   SGA +P P P    + T  L++TA +
Sbjct: 252 DLDVQYRSGA-APQPGP-AHLSLTITLLMTARL 282


>gi|4505865 plasminogen activator, urokinase receptor isoform 1
           precursor [Homo sapiens]
          Length = 335

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 18  CCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDS--SSGRENVSDLTLGPGNSP 75
           C G     L  +GTH   NQS  V G ++  +  H H+    S    +VS  T    N P
Sbjct: 237 CRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHP 296

Query: 76  ITRMNPASGALSPLPRPNGTANTTKNLVVTAEM 108
              +   SGA +P P P    + T  L++TA +
Sbjct: 297 DLDVQYRSGA-APQPGP-AHLSLTITLLMTARL 327


>gi|221219024 pleckstrin homology-like domain, family B, member 1
            isoform a [Homo sapiens]
          Length = 1377

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 19/100 (19%)

Query: 8    PPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDL 67
            PP  P  A+    V + K+ G  T       + +P + SGPL +     SSS + +V+ L
Sbjct: 947  PPPLPAKASRQLQVYRSKMDGEAT-------SPLPRTRSGPLPSSSGSSSSSSQLSVATL 999

Query: 68   TLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAE 107
                G SP    +P S  L+     NGT +  +NL  T +
Sbjct: 1000 ----GRSP----SPKSALLT----QNGTGSLPRNLAATLQ 1027


>gi|38424073 pleckstrin homology-like domain, family B, member 1
            isoform a [Homo sapiens]
          Length = 1377

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 19/100 (19%)

Query: 8    PPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDL 67
            PP  P  A+    V + K+ G  T       + +P + SGPL +     SSS + +V+ L
Sbjct: 947  PPPLPAKASRQLQVYRSKMDGEAT-------SPLPRTRSGPLPSSSGSSSSSSQLSVATL 999

Query: 68   TLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAE 107
                G SP    +P S  L+     NGT +  +NL  T +
Sbjct: 1000 ----GRSP----SPKSALLT----QNGTGSLPRNLAATLQ 1027


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 32.3 bits (72), Expect = 0.55
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 9   PLEPKLAAGCCGVKKPKLSGSGT-HSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDL 67
           P+ P ++        P  +GSG+ +S  + S+    SSS P      +  S     VS  
Sbjct: 103 PVVPAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSST 162

Query: 68  T-LGPGNS-PITRMNPASGALSPLPRP--NGTANTTKNLVVTAEM 108
             LGPG + P T +   SGAL  L     NG  +  K LV  A +
Sbjct: 163 APLGPGAAGPGTGVPAVSGALRELLEACRNGDVSRVKRLVDAANV 207


>gi|208022703 modulator of retrovirus infection [Homo sapiens]
          Length = 157

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 22  KKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMNP 81
           ++P L+G+    H    +  P +SSG         SSS  E+     L PG SP  R   
Sbjct: 80  EQPALAGADNPEHSPPCSVSPHTSSG---------SSSEEEDSGKQALAPGLSPSQRPGG 130

Query: 82  ASGALSPLP 90
           +S A S  P
Sbjct: 131 SSSACSRSP 139


>gi|221219026 pleckstrin homology-like domain, family B, member 1
           isoform b [Homo sapiens]
          Length = 1319

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 19/96 (19%)

Query: 12  PKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGP 71
           PK  +    V + K+ G  T       + +P + SGPL +     SSS + +V+ L    
Sbjct: 904 PKTTSTLKEVYRSKMDGEAT-------SPLPRTRSGPLPSSSGSSSSSSQLSVATL---- 952

Query: 72  GNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAE 107
           G SP    +P S  L+     NGT +  +NL  T +
Sbjct: 953 GRSP----SPKSALLT----QNGTGSLPRNLAATLQ 980


>gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo
           sapiens]
          Length = 427

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 13  KLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGREN--VSDLTLG 70
           +L+AG C       S S  H+ G+ +    G  +G LQ H HV    G E         G
Sbjct: 127 QLSAGLCSAFHMS-SISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQG 185

Query: 71  PG 72
           PG
Sbjct: 186 PG 187


>gi|161016767 mucin 21 [Homo sapiens]
          Length = 566

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 16  AGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG---RENVSDLTLGPG 72
           AG     +   + SG  +  N  ++ P S +G   N +   +SSG     N    T+  G
Sbjct: 222 AGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSG 281

Query: 73  NSPITR---MNPASGALSPLPRPNGTANTTKNLVVTAE 107
            S +T      P+SGA +     + T ++  N    ++
Sbjct: 282 ISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSD 319


>gi|22547204 hairless protein isoform a [Homo sapiens]
          Length = 1189

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 5   RCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG 60
           RC  P  P    GCC    P   G G    G     + G +SG  +  + V+ +SG
Sbjct: 313 RCPSPEPPVTQRGCCS-SYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASG 367


>gi|22547207 hairless protein isoform b [Homo sapiens]
          Length = 1134

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 5   RCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG 60
           RC  P  P    GCC    P   G G    G     + G +SG  +  + V+ +SG
Sbjct: 313 RCPSPEPPVTQRGCCS-SYPPTKGGGLGPCGKCQEGLEGGASGASEPSEEVNKASG 367


>gi|9507165 syntrophin, gamma 2 [Homo sapiens]
          Length = 539

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 20  GVKKPKLSGSGTHSHGNQSTTVPGSSSGPL 49
           G   P L  SG H +GN STT P S S P+
Sbjct: 178 GASSP-LFDSGLHLNGNSSTTAPSSPSSPI 206


>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
          Length = 485

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 9/55 (16%)

Query: 31  THSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMNPASGA 85
           T  H +    VPGSSSGP+     + SSSG  + S    GPG   +    P SG+
Sbjct: 128 TTDHSSNPGPVPGSSSGPV-----LGSSSGAGHGSGSGSGPGCGSV----PGSGS 173


>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
          Length = 501

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 9/55 (16%)

Query: 31  THSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMNPASGA 85
           T  H +    VPGSSSGP+     + SSSG  + S    GPG   +    P SG+
Sbjct: 128 TTDHSSNPGPVPGSSSGPV-----LGSSSGAGHGSGSGSGPGCGSV----PGSGS 173


>gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]
          Length = 636

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 7   VPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSD 66
           +PP  P L     G   P    +G  S+   S T P   S      Q   SS        
Sbjct: 73  LPPPSPSL-----GSFDPLAELTGKDSNVTASPTAPACPSDKPAPVQKPPSSGTSSEFEV 127

Query: 67  LTLGPGNSPITRMNPASGALSPLPRPNG 94
           +T    NSP +  +  + AL PLPR +G
Sbjct: 128 VTPEEQNSPESSSHANAMALGPLPREDG 155


>gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo
           sapiens]
          Length = 457

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 13  KLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGREN--VSDLTLG 70
           +L+AG C       S S  H+ G  +    G  +G LQ H HV    G E         G
Sbjct: 157 QLSAGLCSAFHMS-SISQLHAEGPDALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQG 215

Query: 71  PG 72
           PG
Sbjct: 216 PG 217


>gi|27477127 keratin 82 [Homo sapiens]
          Length = 513

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 19  CGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGPGNS 74
           CGV  P LS     S+G  S    G    P +    +   SGR+  S +TLG G S
Sbjct: 454 CGVSTPVLSTGVLRSNGGCSIVGTGELYVPCEPQGLLSCGSGRK--SSMTLGAGGS 507


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 7   VPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGP 48
           +PP+EP ++A   G   P LS S + S  + S +   SSS P
Sbjct: 833 IPPVEPLMSAASPG--PPTLSSSSSSSSSSSSFSSSSSSSSP 872


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 7    VPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGP 48
            +PP+EP ++A   G   P LS S + S  + S +   SSS P
Sbjct: 1034 IPPVEPLMSAASPG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1073


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 7    VPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGP 48
            +PP+EP ++A   G   P LS S + S  + S +   SSS P
Sbjct: 1034 IPPVEPLMSAASPG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1073


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 8/42 (19%)

Query: 9   PLEPKLAAGCCGVKKPKLSGSGT--HSHGNQSTTVPGSSSGP 48
           P++P +      +K+P+L G G+  HS   QS+  PG S GP
Sbjct: 459 PMDPMV------MKRPQLYGMGSNPHSQPQQSSPYPGGSYGP 494


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 8/42 (19%)

Query: 9   PLEPKLAAGCCGVKKPKLSGSGT--HSHGNQSTTVPGSSSGP 48
           P++P +      +K+P+L G G+  HS   QS+  PG S GP
Sbjct: 459 PMDPMV------MKRPQLYGMGSNPHSQPQQSSPYPGGSYGP 494


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 8/42 (19%)

Query: 9   PLEPKLAAGCCGVKKPKLSGSGT--HSHGNQSTTVPGSSSGP 48
           P++P +      +K+P+L G G+  HS   QS+  PG S GP
Sbjct: 459 PMDPMV------MKRPQLYGMGSNPHSQPQQSSPYPGGSYGP 494


>gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 418

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 26  LSGSGTHSHGNQ-STTVPGSSSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMN---P 81
           L  +GT + G    T +PG  + PL  H+H  S     +   +   PG +P  R+    P
Sbjct: 56  LPWTGTATEGQSVGTCLPGLFTRPLDRHRHRGSECWHLSSGSVHPSPGPAPPQRVRVLAP 115

Query: 82  ASGALSPLP 90
                SP+P
Sbjct: 116 VFRVSSPVP 124



 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 8   PPLEPKLAAGCCGVKKPKLSGSGTHSHGNQ-STTVPGSSSGPLQNHQHVDSSSGRENVSD 66
           PP   ++ A    +  P +  +GT + G    T +P   + PL  H+H  S     +   
Sbjct: 196 PPQRVRVLAPVFRICSP-VPWTGTATEGQSVGTCLPDLFTRPLDRHRHRGSECWHLSSGS 254

Query: 67  LTLGPGNSPITRMN---PASGALSPLP 90
           +   PG++P  R+    P     SP+P
Sbjct: 255 VHPSPGSAPAQRVRVLAPVFRICSPVP 281


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,477,376
Number of Sequences: 37866
Number of extensions: 655627
Number of successful extensions: 2254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 2214
Number of HSP's gapped (non-prelim): 70
length of query: 310
length of database: 18,247,518
effective HSP length: 102
effective length of query: 208
effective length of database: 14,385,186
effective search space: 2992118688
effective search space used: 2992118688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.